rna9407, rna9407 (mRNA) Nannochloropsis gaditana

Overview
Namerna9407
Unique Namerna9407
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length498
Alignment locationKK037253.1:192730..193705 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102204g1.8482.mrna
Orig protein idgnl|cribi|Naga_102204g1.8482
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:192730..193705 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102204g1gene9127Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21296.1cds9377Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9407rna9407-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9407 ID=rna9407|Name=rna9407|organism=Nannochloropsis gaditana|type=mRNA|length=498bp
ATGCATTGCACAGCCATGGCTACTCGGCGCGCATCCTCTGTGCTTTCCTC
TCTTCCATCCTCCGGGGCCCTCCTCAATCGCACTTCACGGACAAATGCCT
TCCTCCACGGCCGATGCATCAGCACAGGACAACCCAAGAAAGTGAACGTG
CAAAGCCTCGTAGAAGCCGACAGTGGGGCCGTGGGCACGAAATTCTACCA
TTTGAGCAACACCGCCCTCCTTGTCGCCGCCCCCCTCGCCCTCTTCCTCT
CCCCGTCCCCCCTCACCTTTCCCCTCGACCTCTTTTTGGGCGTCGCCTTC
CCCGTGCACGGACACATCGGCATCAATTACATCATCTCCGACTACGTCCC
GCGGGCCTCGCGGCCCTTGGCCCGTTACGTGCTCCTTGGGGCCACGACGG
TAACGGTTTTAGGACTCTTGAAACTGAATCTGAGTGGACCGGGACTGACG
GAGACCTACAAGAGTCTGTGGCGGGCGGAAAAGAAGGAGGAGGCGTGA
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protein sequence of rna9407

>rna9407-protein ID=rna9407-protein|Name=rna9407|organism=Nannochloropsis gaditana|type=polypeptide|length=106bp
MQPLLARSGDVTLTGATEGAGIGAIQKGRTYMGGRKEGKEWAGWDEEEKR
AKGGKLGMEERRPGVGIRHIALRFQIQREEGREDAGVKEEGGEGLRCGQG
EHLPCV
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mRNA from alignment at KK037253.1:192730..193705-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9407 ID=rna9407|Name=rna9407|organism=Nannochloropsis gaditana|type=mRNA|length=976bp|location=Sequence derived from alignment at KK037253.1:192730..193705- (Nannochloropsis gaditana)
CAGAGGGGGGGACTCTCCTTTGGGGGAGGTCTCAGTCAGAGCAGTCTGGG
CGACGGGAGGGGGGGCGGGTGGGGGGAAGGGCGGGAGGGAGGAGGTGACT
ACGTCGGGTTCGACTCCTCGGCGTTCAATCGGAGCGGCCCAGTTTTGGGA
GGAGGTGGCGGGGGAGGCAGGGGCGGAGGGAGAGGGGGAGGGACGCCAGA
AATGTTGGGTCAGAGTCCGGTGTATCAGGATGTGGAGGAGGAGAAGAGAG
AGCGATGAATGGGAGGGCGAAAAAGACGAGAAAAGAACCTTCTAGAAGAA
CGAAGGGCAGGACGACACGACAAGCGCGCGCGGCCGCGCAAAGACATCCC
CCGGCACAGGAAGGGGAGGAAGAGAAGGAGGGAGTGAGGGAGGGAGTGAG
GAAGGTCTTTGTAGGTGCCCTCGGTGCCGTTCACAAGGGCCTTACTCCCC
TGTCCCACACCGTCTCCCGGTCCACAAAAATGTCCTAGCGCGCACGACCT
GGTGACAAGCCCCCCCAACAAAGTCGGGGGTAGCCGGCTGCGTGCGCCTA
TGCAGCCACTCCTTGCCCGGTCAGGCGACGTCACTCTCACGGGCGCCACG
GAGGGTGCGGGCATTGGCGCGATCCAAAAAGGCAGGACGTATATGGGGGG
GAGGAAGGAGGGGAAGGAATGGGCTGGTTGGGACGAGGAGGAAAAACGTG
CGAAGGGAGGCAAGCTGGGAATGGAAGAGAGAAGGCCGGGAGTAGGGATA
AGGCACATTGCGCTTCGTTTTCAGATTCAGAGGGAGGAAGGTAGGGAGGA
TGCAGGGGTCAAGGAAGAGGGAGGGGAAGGACTACGGTGCGGGCAGGGTG
AGCACTTGCCCTGCGTCTGACTGGGGGGGAAGGAAAACTAATCGTGCCGC
GGGCGAGTGGGGGAGGGCAAGAGAGCTTCCTTTCTATCTAACGGGCGGAT
AAACGCCATGGAGGGGGAGGAAGGGG
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Coding sequence (CDS) from alignment at KK037253.1:192730..193705-

>rna9407 ID=rna9407|Name=rna9407|organism=Nannochloropsis gaditana|type=CDS|length=321bp|location=Sequence derived from alignment at KK037253.1:192730..193705- (Nannochloropsis gaditana)
ATGCAGCCACTCCTTGCCCGGTCAGGCGACGTCACTCTCACGGGCGCCAC
GGAGGGTGCGGGCATTGGCGCGATCCAAAAAGGCAGGACGTATATGGGGG
GGAGGAAGGAGGGGAAGGAATGGGCTGGTTGGGACGAGGAGGAAAAACGT
GCGAAGGGAGGCAAGCTGGGAATGGAAGAGAGAAGGCCGGGAGTAGGGAT
AAGGCACATTGCGCTTCGTTTTCAGATTCAGAGGGAGGAAGGTAGGGAGG
ATGCAGGGGTCAAGGAAGAGGGAGGGGAAGGACTACGGTGCGGGCAGGGT
GAGCACTTGCCCTGCGTCTGA
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Synonyms
Publications