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Properties
| Property Name | Value |
|---|
| Product | lysine-specific demethylase 5d |
| Orig transcript id | gnl|cribi|Naga_101642g1.4656.mrna |
| Orig protein id | gnl|cribi|Naga_101642g1.4656 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:182550..184241 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9401 ID=rna9401|Name=rna9401|organism=Nannochloropsis gaditana|type=mRNA|length=2300bp
GGGAGGAGGAAGGAGGGAGGGGAAGAGGAGGAGCGGGGACGCGGGAGGAG
GCGGAAGCTGAGGAAAGGAGTCGGCGCCCCCCAAATGAAATCTTCGGACA
CTCCCACTCCTTCCTTCCGCCATCCCCTAACGGAGGAGGCCAGCCCCACC
TCCCTGGAAACGGTTGCATTCAACGCTTTTCTCCAACGGCTCACCGATGC
GGCTGAAACCGCCAGCGCCCTCTTCGCCGCCCCTCCCCTTCCTCCGTCCC
CCTCCGGGCTTCCCGCCTGGTGCCGACGTCCTTCCCCCTCCCACCTCCTT
AACTTGTGGAAGCGCGGGAAGGAGCTGGGCGCGCCGCGGACGGAGATGCG
GGCCTTGGAACGGGCATTGGAAAAAGCCCGAACCAACACGGAGAAGGCGC
TGAACCTCCTCCCCCGCGGCACTGCCAAACGAGGGCCCCTCCGCCTCCAT
CACCTGCGCCGGGACCAGCGGCAGGACGAGCTCGGCTCAGAACCTCCTTC
CCTCCTTCCTCCCCTGGCTCCTCCCCTCTCTCTCGAAGGTCTCCTGAACC
TCCTCCTCGACCTCCTCGCTTTCCCCCTCCGCCTCCATCAGCCCGTGGCC
GCCGCCTTTCGCCTCCTCGCTGAAGTGACCCGCCTCCGCCGGGAGGTCTG
GACGCTCCTTGGCCTTTCCCTCCCTCCCTCCCTCCCCCCCGCCCGCCCTC
CCTCCCGCCCGCCCTCCGATCCGGCCCTCTTGTCCTTCCTCACTCTGGAG
CGCTGTGTCAGGGACGCACTGCGCCTTCTCTGCTCGACTTGCGCCCAACC
AGAGGATGCCCCCTCTTCCTTAACCCTTCCCTCCTCCTCCTCTTCCCCAT
CCTCCTTCTCCGGCGCCCCCCGGATCTACCCCCAGGGCCTGCCTCCCGCC
CTCCGCCTCCCCTCCCATCACCCCGGCGACGGAGGGAAGCAGGCAGGCAT
GAAGGGAGGGAAGTGGAAGGGGAGGAGGTTGTGCTATTTTCCCGGGCCCG
ACTTTTTCTGGGGCGTAAGCCACCTAAAGGAGGGCTTGAGGCTCTTGAGG
GTTGCGGGTGTGCCGGAGTGGGAGGCGTTGGAGGAATGTGAACGGAGGGA
GGAGGAGGAGGAGGCAAAGAGGCAGGGAGGGCGACGGAAGGGAGGGAGGA
AGAGGAAGCGGGAAGGCCGGGAGGGTGATGGGATCGGAAGGGATGGCGGG
CGGGGGGAGGTCGAGGGGATGGTGGTGAGGGTGAGGAGGCTGGAGGTTCC
GCCCTTCAAGTGGGTGGTCGTGGGGCTGATGGGGAGGGAAGAGAAGAGGA
AGGAGGGCGGGACGGTGGGGGGCATGCAGCGCGCGAAGGAAAGGGCGAAA
AGGGAAGGGCACGAAGGGAAAGGCGGGGTGGTGCAGTTGGCGATGAAGGA
GGAGGGGCGAGGGCGTCAGAAAAGTTCTCTTGGTTGGGGAGGTGACGAGG
AGGGAGGGGGATAGAGATGGGGAGGACAGGAGGGAGGGGACGATGGAGGT
TCCGGAGGCTGCGGTGGTCACCTCTGCGACGGCATGGAGTGAACGGAAGG
GAAGGAAGGAGGAGGGAGTTAGAAGCGAGATGAAGGAGGGACAAGGAGGG
AGTCGAGTGAAGGAGGGAGGTAGAGGGAGGCAGGAGGAGAAAGCGATTGG
GGAGGAAATGAGGTGGCCAAGCGATGAGGAGGGGGGCAGGAGATTGAAGA
AGAAGGAAGTCAGATCGCGTTTCCCTCCGAGAGAGACTGATGCACATTGC
GCGTGGGAGGGTTTGAAAAAATGGGATGCGGAAGCGGCTGAGTACAGGGG
CCGTGGAGGTTGATGCCCGCAGGTGCGATCTTCTGGGCCAGGGGCGTCAT
CCGGCGCAGGCCTTGGAGGTGTGATGAGGAGGGAAGGCCTTTCAGGGTGA
TGAAGAAAGAGAGTGAAATGAAACGACAGGCGGGGGCCGGAAGGTTGTGT
GCATATTGGTTCATGGGGTGGATAGAGAGGAGGAAGGAGGGGAGTATCGA
GGGAGGGATCGAGGGACGCCTTTCTTCGCTGACGTCGGGGCCGTCATTGC
CTGAGTGATGGTAATGAATTGATACCGTCGTGAAGGAAAGAGCGAGACCT
CCTCTCACCCATGCACGAGGAAATACGAGCATGGGGAGGTAAAAAGAAGT
GATAGGTAACAGGGGAGCATGGCCCTCAGCGTTAGGAAAGCGTTTTCGCT
CTCGTCACCCTGGCGGTATTTTTTTCCCCTTTATCATCATGCACAACGCC
CTGCACAGCAAAGGACGACCAAGGCTCTCCAACAACAAGAGCGAGGTGGG back to topprotein sequence of rna9401 >rna9401-protein ID=rna9401-protein|Name=rna9401|organism=Nannochloropsis gaditana|type=polypeptide|length=489bp
MGKKASAPRSSPPPSVPPSVPPYYTETLPRRDLLILLANGASPASAQAVH
SQDFCEVCLQTSVGLDGGRGGGRGGGRPMSECYVCGALRHAACMEPPRKH
LPFGDWFCPDCAKEEVDDLLLPPSRPPSSPSPCRRRDSEGASRVGGRKGG
GRGEERGGARGAPGVEELFASFGFEDGEDYTLESFKAMAVSWRDEYFGRA
RGKEGGEVTEEEVEAEFWRLIAGGGAGGDERQGGREGGRGEGRGVSRAPP
EVKVEYGSELDTGRYGSGFPLPAPLRRITPGSNDCTFLKPRPSTVATPPR
SLEGGKEGGKEGGKEGGKLSTPARLVPRRGPPSVPPSPKPYLRHGWNVNN
LPLATGSMLHHLDVPVTGVVVPWLYVGMAFSAFCWHAEDHYLYSINYLHH
GLGPKHWYGLPGAAGDAFEALVRESYPELVARNPDLMLQLVTMVDPRWVA
NRGLPVYTTKQRPGLANSSSPFPTPTTRASTTTSTWPKR back to topmRNA from alignment at KK037253.1:182550..184241- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9401 ID=rna9401|Name=rna9401|organism=Nannochloropsis gaditana|type=mRNA|length=1692bp|location=Sequence derived from alignment at KK037253.1:182550..184241- (Nannochloropsis gaditana)
AAAGAAGGGAGGGTCCAGAGGCCAGGGCAGAGCGGGTTCGCAGAGGTCGC
TTGCCCAGAAAAGCATGGGAAAGAAGGCGTCGGCCCCACGTTCCTCCCCC
CCGCCCTCCGTCCCGCCCTCCGTCCCGCCTTACTACACGGAAACCCTCCC
CCGCCGCGACCTCCTCATCCTCCTCGCCAACGGCGCCTCCCCGGCCTCCG
CCCAGGCCGTTCACTCCCAGGACTTCTGCGAGGTCTGCTTGCAAACCTCC
GTCGGCCTCGATGGAGGGCGGGGGGGAGGGCGGGGGGGAGGGCGGCCCAT
GTCGGAGTGCTACGTCTGTGGCGCCTTGCGGCACGCAGCGTGCATGGAAC
CCCCTCGGAAGCACCTTCCTTTTGGGGACTGGTTCTGCCCCGACTGTGCG
AAAGAGGAGGTGGATGATCTCCTCCTTCCGCCCTCCCGCCCTCCCTCCTC
CCCCAGCCCCTGTCGGCGGCGGGACTCCGAGGGGGCGTCGCGGGTGGGGG
GTAGGAAGGGGGGGGGAAGGGGGGAGGAAAGGGGAGGGGCCCGCGGTGCC
CCCGGGGTTGAGGAATTGTTCGCCTCGTTTGGCTTCGAGGACGGCGAAGA
TTATACTTTGGAGTCCTTCAAGGCGATGGCCGTGTCCTGGCGCGACGAGT
ACTTCGGGCGGGCGCGGGGGAAGGAGGGGGGGGAGGTGACCGAGGAAGAG
GTGGAGGCAGAGTTCTGGCGTCTGATAGCGGGGGGCGGGGCGGGGGGCGA
CGAAAGGCAGGGAGGGCGGGAAGGAGGAAGGGGGGAAGGGCGGGGGGTGA
GTCGGGCCCCCCCTGAGGTAAAGGTCGAGTACGGAAGCGAGCTGGACACC
GGCCGTTACGGCTCTGGGTTTCCGTTACCGGCGCCGTTACGGAGGATAAC
GCCTGGCAGCAACGATTGCACCTTCCTGAAGCCCCGCCCGAGCACCGTGG
CCACTCCCCCCCGTAGCTTGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGA
GGGAAGGAGGGAGGGAAGCTCTCCACGCCTGCCCGCCTTGTCCCCCGCCG
GGGCCCGCCCTCGGTCCCGCCCTCCCCCAAGCCCTACCTCCGCCACGGCT
GGAACGTGAACAACCTGCCTCTGGCCACGGGGAGCATGCTGCACCACCTG
GACGTGCCGGTGACGGGGGTGGTGGTCCCCTGGCTCTACGTAGGCATGGC
CTTCTCCGCCTTTTGCTGGCACGCGGAGGACCACTACCTCTACTCCATCA
ACTACCTCCACCACGGCCTGGGGCCCAAGCACTGGTACGGACTCCCCGGC
GCCGCGGGCGACGCCTTCGAGGCGCTCGTCCGGGAAAGCTACCCGGAACT
CGTCGCCCGAAATCCAGACCTGATGCTGCAGCTCGTGACCATGGTCGACC
CCCGGTGGGTGGCGAACCGCGGCCTGCCCGTCTACACGACCAAGCAACGG
CCAGGTCTGGTTTGAAAATTTGAATTTGAACCGTGTTCCTTTGTGCCTGT
TTCTTTTCTTCCCCCCCTTTTCTTTCTCGGGGGGAATCCGGGGACAGGCT
AGTGGACAGCTCCCGTCTCCTTCCATGCATCGATCCTTCTCACGACTCCT
CCCTCCCGCCCTCCCAGGCCAATTCGTCGTCACCTTTCCCCACGCCTACC
ACGCGGGCTTCAACCACCACTTCAACCTGGCCGAAGCGGTGA back to topCoding sequence (CDS) from alignment at KK037253.1:182550..184241- >rna9401 ID=rna9401|Name=rna9401|organism=Nannochloropsis gaditana|type=CDS|length=2940bp|location=Sequence derived from alignment at KK037253.1:182550..184241- (Nannochloropsis gaditana)
GCCAATTCGTCGTCACCTTTCCCCACGCCTACCACGCGGGCTTCAACCAC
CACTTCAACCTGGCCGAAGCGGTGAATGGGAAAGAAGGCGTCGGCCCCAC
GTTCCTCCCCCCCGCCCTCCGTCCCGCCCTCCGTCCCGCCTTACTACACG
GAAACCCTCCCCCGCCGCGACCTCCTCATCCTCCTCGCCAACGGCGCCTC
CCCGGCCTCCGCCCAGGCCGTTCACTCCCAGGACTTCTGCGAGGTCTGCT
TGCAAACCTCCGTCGGCCTCGATGGAGGGCGGGGGGGAGGGCGGGGGGGA
GGGCGGCCCATGTCGGAGTGCTACGTCTGTGGCGCCTTGCGGCACGCAGC
GTGCATGGAACCCCCTCGGAAGCACCTTCCTTTTGGGGACTGGTTCTGCC
CCGACTGTGCGAAAGAGGAGGTGGATGATCTCCTCCTTCCGCCCTCCCGC
CCTCCCTCCTCCCCCAGCCCCTGTCGGCGGCGGGACTCCGAGGGGGCGTC
GCGGGTGGGGGGTAGGAAGGGGGGGGGAAGGGGGGAGGAAAGGGGAGGGG
CCCGCGGTGCCCCCGGGGTTGAGGAATTGTTCGCCTCGTTTGGCTTCGAG
GACGGCGAAGATTATACTTTGGAGTCCTTCAAGGCGATGGCCGTGTCCTG
GCGCGACGAGTACTTCGGGCGGGCGCGGGGGAAGGAGGGGGGGGAGGTGA
CCGAGGAAGAGGTGGAGGCAGAGTTCTGGCGTCTGATAGCGGGGGGCGGG
GCGGGGGGCGACGAAAGGCAGGGAGGGCGGGAAGGAGGAAGGGGGGAAGG
GCGGGGGGTGAGTCGGGCCCCCCCTGAGGTAAAGGTCGAGTACGGAAGCG
AGCTGGACACCGGCCGTTACGGCTCTGGGTTTCCGTTACCGGCGCCGTTA
CGGAGGATAACGCCTGGCAGCAACGATTGCACCTTCCTGAAGCCCCGCCC
GAGCACCGTGGCCACTCCCCCCCGTAGCTTGGAGGGAGGGAAGGAGGGAG
GGAAGGAGGGAGGGAAGGAGGGAGGGAAGCTCTCCACGCCTGCCCGCCTT
GTCCCCCGCCGGGGCCCGCCCTCGGTCCCGCCCTCCCCCAAGCCCTACCT
CCGCCACGGCTGGAACGTGAACAACCTGCCTCTGGCCACGGGGAGCATGC
TGCACCACCTGGACGTGCCGGTGACGGGGGTGGTGGTCCCCTGGCTCTAC
GTAGGCATGGCCTTCTCCGCCTTTTGCTGGCACGCGGAGGACCACTACCT
CTACTCCATCAACTACCTCCACCACGGCCTGGGGCCCAAGCACTGGTACG
GACTCCCCGGCGCCGCGGGCGACGCCTTCGAGGCGCTCGTCCGGGAAAGC
TACCCGGAACTCGTCGCCCGAAATCCAGACCTGATGCTGCAGCTCGTGAC
CATGGTCGACCCCCGGTGGGTGGCGAACCGCGGCCTGCCCGTCTACACGA
CCAAGCAACGGCCAGGTCTGGCCAATTCGTCGTCACCTTTCCCCACGCCT
ACCACGCGGGCTTCAACCACCACTTCAACCTGGCCGAAGCGGTGAATGGG
AAAGAAGGCGTCGGCCCCACGTTCCTCCCCCCCGCCCTCCGTCCCGCCCT
CCGTCCCGCCTTACTACACGGAAACCCTCCCCCGCCGCGACCTCCTCATC
CTCCTCGCCAACGGCGCCTCCCCGGCCTCCGCCCAGGCCGTTCACTCCCA
GGACTTCTGCGAGGTCTGCTTGCAAACCTCCGTCGGCCTCGATGGAGGGC
GGGGGGGAGGGCGGGGGGGAGGGCGGCCCATGTCGGAGTGCTACGTCTGT
GGCGCCTTGCGGCACGCAGCGTGCATGGAACCCCCTCGGAAGCACCTTCC
TTTTGGGGACTGGTTCTGCCCCGACTGTGCGAAAGAGGAGGTGGATGATC
TCCTCCTTCCGCCCTCCCGCCCTCCCTCCTCCCCCAGCCCCTGTCGGCGG
CGGGACTCCGAGGGGGCGTCGCGGGTGGGGGGTAGGAAGGGGGGGGGAAG
GGGGGAGGAAAGGGGAGGGGCCCGCGGTGCCCCCGGGGTTGAGGAATTGT
TCGCCTCGTTTGGCTTCGAGGACGGCGAAGATTATACTTTGGAGTCCTTC
AAGGCGATGGCCGTGTCCTGGCGCGACGAGTACTTCGGGCGGGCGCGGGG
GAAGGAGGGGGGGGAGGTGACCGAGGAAGAGGTGGAGGCAGAGTTCTGGC
GTCTGATAGCGGGGGGCGGGGCGGGGGGCGACGAAAGGCAGGGAGGGCGG
GAAGGAGGAAGGGGGGAAGGGCGGGGGGTGAGTCGGGCCCCCCCTGAGGT
AAAGGTCGAGTACGGAAGCGAGCTGGACACCGGCCGTTACGGCTCTGGGT
TTCCGTTACCGGCGCCGTTACGGAGGATAACGCCTGGCAGCAACGATTGC
ACCTTCCTGAAGCCCCGCCCGAGCACCGTGGCCACTCCCCCCCGTAGCTT
GGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGGGAAGC
TCTCCACGCCTGCCCGCCTTGTCCCCCGCCGGGGCCCGCCCTCGGTCCCG
CCCTCCCCCAAGCCCTACCTCCGCCACGGCTGGAACGTGAACAACCTGCC
TCTGGCCACGGGGAGCATGCTGCACCACCTGGACGTGCCGGTGACGGGGG
TGGTGGTCCCCTGGCTCTACGTAGGCATGGCCTTCTCCGCCTTTTGCTGG
CACGCGGAGGACCACTACCTCTACTCCATCAACTACCTCCACCACGGCCT
GGGGCCCAAGCACTGGTACGGACTCCCCGGCGCCGCGGGCGACGCCTTCG
AGGCGCTCGTCCGGGAAAGCTACCCGGAACTCGTCGCCCGAAATCCAGAC
CTGATGCTGCAGCTCGTGACCATGGTCGACCCCCGGTGGGTGGCGAACCG
CGGCCTGCCCGTCTACACGACCAAGCAACGGCCAGGTCTG back to top
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