rna94, rna94 (mRNA) Nannochloropsis gaditana

Overview
Namerna94
Unique Namerna94
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2129
Alignment locationCM002455.1:257758..258378 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100033g19.8400.mrna
Orig protein idgnl|cribi|Naga_100033g19.8400
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:257758..258378 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100033g19gene92Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna94rna94-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30561.1cds94Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna94 ID=rna94|Name=rna94|organism=Nannochloropsis gaditana|type=mRNA|length=2129bp
ATGGTCAAGAAAAAGGGAAAATCCAAGCGTGTGACATTCAAACAGAAGTA
CAAGATCGAACGACGGGTAAAAGAACACAAGCGCAAGACTAAGAAAGAAA
CACGGCGCCGGGCCAAGCTCGGTCTTCCTCCTCTCGGGATTGGGCAACGC
AAGAAGGAAGTGAGCATTCCCAACGCCTGGCCGTTCAAAGAACAGCTTCT
CGAGGAGCTCGCGACGGCCAAACGGAACAAGGAAGCGGAGGACGCCAAGA
AGAAGGAGGAAGCGGCGTTGCGACGGAAGCAGAAAGGTTTGGTAGGAAAA
GACGTGGCAGACTTGGTGACGCAGGCGGCCGCGGCCCAGGCCACCTTTGC
CTCCCAAGGGCCCGGCACGCTTTCCCTGGAAGAAAATGGCGTGAACGACA
TGAAAGCTTTGGGGCAACAGAGCCGACGGGCATTTATCCGGGATTTGAAA
GAAGTGGTGGAGCAGGCCGACGTGGTCCTGGAGGTCCTGGACGCCCGAGA
CCCGTTGGGTTCCCGGGGGGAGGGGGTGGAGGAACTGATCCTCCGAAAGC
CGAACAAGAAACTAGTCCTAGTCCTGAACAAGGTCGACCTGGTGCCAAGG
GAAGTGGTGGGGGCGTGGCTGGCCTACCTTCGCCGTTTCCATCCCACCGT
GGCTTTTAAATCCGCCACCCAGGAGCAACGGGTGCAGCTCGCCCAGCACG
GTGGGGACGCGTCCAAGGCAGGGGCCAACCTCCTCTCCCGCAGTGGCTCC
GTGGGCGCCGAGGCTTTGCTGCAGCTTTTGAAAAACTACTCGCGGTCCCT
GGACATCAAAACCTCCATCAGCGTGGGCGTGGTGGGCTACCCCAACGTGG
GGAAATCCTCCCTCATCAACTCCCTGAAACGGACCAAGGCGGCCGGCGTC
TCCTCGACCCCCGGATTCACCCGCTGCATGCAGGAAGTGCAGTTGGACAA
GCACATCAAACTGTTGGACTCCCCGGGCATTGTGTTCGACGATTCGGACG
TGGAGGGGGTTCTCCTTCGGAATTGCGTGAAGGTAGACAGCCTCCCGGAC
CCCTCCGCGGCCGTGGGCGCGCTCTTGCAACGCTGCGAGGCTCAGGACTT
GATGATGATATACGCCTTGCCCGCCTTCGACGCCACCGACGTCCAAGGCT
TCCTGGCCCTGCTGGCTCGGAAGATGGGGAAGCTCTTGAGGGGGGGGGTC
CCGGACCGGACGGCGGCGGCGCGGGTCTTGCTCCAAGATTGGAACACGGG
CAAGGTCCCTTTCTACACGAAGCCGCCGCCTCTGCCCTCGTCCCGGGTGG
ACGAGGAAGCGCAATTGGTGGGCTCGTTGGGCACTGCTTTCGAGGTCGGC
TCGGTGTTGGAGGAGGGCGATGCCAAGGTGATGGCTTATCTGGAAGAAGG
GGGGGAGGGCGGGGTAGGGGACGGGAATTTTGTCGCCTTTGAGAGTGGTG
GGGTGGCGGGGAGGAGGGTGGGTCTGGGATTGAGTGAAGGGAGACAAGGG
GAACTGGGGGACGAGGAGGACCTGGAAATGGCCGAGGGGGATGCAGAGGA
TGGAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAGG
AGGAGGAGATTATGGAGGTGAGCGAGGCCCCTGTGTCTCGGCTCCGGACC
TCCAGGCGCGGGACGAGGCGGCAGGACGCAGGCAAAGTGTCAACACGAGA
GGGGGAGAAGATGAAGACGGAAGCGGGCCAGGGGGAGCTGAAAAAGAAAG
GTCGCATGACAGACAGAGGGTCAACGGCCTCAGGAAAATCCGCTCAGGGC
GAAGGGGCACGAAGGAAGGAGAGAACGAAACGGAGTCTTTCCAATCAAAG
TGAGGCGGTGAGTATGGCTATGGCATTGGATGATGCGAAAGGGGATGGCT
TGAATGTCCAGATAAATCAAACAGCCAGGAAGAAAATGGTAGCGGAGAGG
AAGAAAGCTCGCAAGCTGACTCGACGGGCGGGGGGGACCGGGGCGACCGC
TATGGACGCAGACTATGATTTTGCAACTGACTTCGTGTGATGATGGCGTG
AATTTGTTCGTAGTGCTAGGATCATGATATACAAAGAAAAGTCGATGAAA
AAGTACATACCAAAATGAGCGGACATTCA
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protein sequence of rna94

>rna94-protein ID=rna94-protein|Name=rna94|organism=Nannochloropsis gaditana|type=polypeptide|length=101bp
MIFLSRAGLLCGFPYSNKRQWILNSWLHFTPSHAHFHDNLPPPYKISRLT
SGHFVNGIALNRSKIARGEEYRDHLVAVSSITPLGGPRFTIVETHHFPYP
A
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mRNA from alignment at CM002455.1:257758..258378-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna94 ID=rna94|Name=rna94|organism=Nannochloropsis gaditana|type=mRNA|length=621bp|location=Sequence derived from alignment at CM002455.1:257758..258378- (Nannochloropsis gaditana)
ATGATATTCCTGAGCAGAGCGGGTCTGGTCAGAAAGGGGCGATGGGTGGC
TGGAGGCAAGAATGAAGGCGCCATGTCTTTATATGGCCCTCTTTAAAAAC
CAAAAATCACTCAAATCAAAATCATACCTGCATAAAGGATCGACCATGTC
CTTAATTTCTGCTGTAGGCTCGTGGTTTTCATTCTGTGTGCATCCCTCTT
CCTATCCATTCAGCTTTGTGGATTCCCCTACAGCAACAAGAGGCAGTGGA
TACTAAATAGTTGGCTCCATTTCACGCCTTCACACGCCCACTTTCACGAC
AACTTGCCGCCACCATATAAGATATCGAGATTAACGTCCTAGCTAGGTAC
GTTGGTTTCATGAGTGCGTAAATGCTGTTGCGATTTGAATCAGGCATGCG
ACAAGAGATGAGATACGCAGGAGTCACTTGCAACATCATGTTGTACACCC
TTGATCTGGGCAAGTTCTGGCCACTTTGTCAATGGCATAGCGCTTAATCG
ATCAAAAATAGCACGGGGAGAAGAATATCGCGATCATTTGGTTGCCGTTT
CCTCTATTACGCCTTTGGGGGGTCCACGGTTCACGATCGTCGAGACACAC
CATTTTCCCTATCCGGCCTGA
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Coding sequence (CDS) from alignment at CM002455.1:257758..258378-

>rna94 ID=rna94|Name=rna94|organism=Nannochloropsis gaditana|type=CDS|length=918bp|location=Sequence derived from alignment at CM002455.1:257758..258378- (Nannochloropsis gaditana)
TTCTGGCCACTTTGTCAATGGCATAGCGCTTAATCGATCAAAAATAGCAC
GGGGAGAAGAATATCGCGATCATTTGGTTGCCGTTTCCTCTATTACGCCT
TTGGGGGGTCCACGGTTCACGATCGTCGAGACACACCATTTTCCCTATCC
GGCCTGACTTTGTGGATTCCCCTACAGCAACAAGAGGCAGTGGATACTAA
ATAGTTGGCTCCATTTCACGCCTTCACACGCCCACTTTCACGACAACTTG
CCGCCACCATATAAGATATCGAGATTAACATGATATTCCTGAGCAGAGCG
GGTCTGTTCTGGCCACTTTGTCAATGGCATAGCGCTTAATCGATCAAAAA
TAGCACGGGGAGAAGAATATCGCGATCATTTGGTTGCCGTTTCCTCTATT
ACGCCTTTGGGGGGTCCACGGTTCACGATCGTCGAGACACACCATTTTCC
CTATCCGGCCTGACTTTGTGGATTCCCCTACAGCAACAAGAGGCAGTGGA
TACTAAATAGTTGGCTCCATTTCACGCCTTCACACGCCCACTTTCACGAC
AACTTGCCGCCACCATATAAGATATCGAGATTAACATGATATTCCTGAGC
AGAGCGGGTCTGTTCTGGCCACTTTGTCAATGGCATAGCGCTTAATCGAT
CAAAAATAGCACGGGGAGAAGAATATCGCGATCATTTGGTTGCCGTTTCC
TCTATTACGCCTTTGGGGGGTCCACGGTTCACGATCGTCGAGACACACCA
TTTTCCCTATCCGGCCTGACTTTGTGGATTCCCCTACAGCAACAAGAGGC
AGTGGATACTAAATAGTTGGCTCCATTTCACGCCTTCACACGCCCACTTT
CACGACAACTTGCCGCCACCATATAAGATATCGAGATTAACATGATATTC
CTGAGCAGAGCGGGTCTG
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Synonyms
Publications