rna9384, rna9384 (mRNA) Nannochloropsis gaditana

Overview
Namerna9384
Unique Namerna9384
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1011
Alignment locationKK037253.1:122749..124704 +

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Properties
Property NameValue
Productaurora kinase a
Orig transcript idgnl|cribi|Naga_100214g6.6242.mrna
Orig protein idgnl|cribi|Naga_100214g6.6242
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:122749..124704 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100214g6gene9102Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9384rna9384-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21327.1cds9354Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9384 ID=rna9384|Name=rna9384|organism=Nannochloropsis gaditana|type=mRNA|length=1011bp
ATGCCGTCAAGCCACCCACGCCATCAAATCCTTGTCATTGGTGCCGGGCG
TATGGGAACTATTCGAGCGGCCGCTTTCTATGGCTCCCGGACCTCTACGC
TCGCCGGCATTGTCGATGCTGACGAGGCGAAAGCAGCCGAGCTCGGACGA
CAATATCACGCACCAGCCTTCTCAAACCTCTCTACCGCCCTTCGCGCCCT
CCCTGACGTGCGAGCAGTTTGGATCTGTACGCCGACGCCTTTGCACACTG
AGAGCATCAAAGAGTCGATGGAAGCGGGTCTCGCTGTGGGGATTGAGAAA
CCCGTAGCCATCCAGACCGACGACATACGCCTATGTTACCAGTGGGCCGC
CGAGAAAAACGTCCCGCTCTACTGCAGCTTTCAGCGGAGGATAGACCCTA
GCTACGTGCAGCTCCTTCAAACCGTGAAAGAAGGAAAGATAGGAGACATC
CGATCCGTCCGGGCGGTATTCCGGGACCATCCCGTTCCTTCCCTGGAGTT
CTTGAGGCTGGGAGGGGACATCTTCCACGACTTGGTGGTGCATGACGCCG
ACTTCATCATGCACCTACTTCAAGAAACGCCATCTTCCGTCTACGCCACT
GGGAGTGCCTTTCACCCCTCGCTCCGCGCCCACCGCATCATTGACACCGC
ACACTGCCTCCTTCACTTCCCCTCCGGCGTCCTCGCGAGCATTGAATTGA
GTCGTTCTTCGCCCTACGGGTACGACCAACGCATAGAGGTGTGCGGGACT
GAAGGTATGTTGTATATAAAAAACGAACTGAACACGCACGTCGTCTCTGT
GACGGCGGCGGGGGGCATCGCGCATGCCAATCCTGTGCATTCTTTCCCTG
AGCGCTTTGCTCGTGCCTACGTCATGGAGGTGGAAGACTTCGGAAAGATA
TTGAACGGGAAAAGCGCACCAACCATAACGTGTGAGGACAGTATAAATAG
CACGCGTGTTGCGCAGGCTTGCGGGCGCTCCGTCATAGATGGAAGGCCCG
TACCCTTGTGA
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protein sequence of rna9384

>rna9384-protein ID=rna9384-protein|Name=rna9384|organism=Nannochloropsis gaditana|type=polypeptide|length=529bp
MTSICEECEEMPAAMRCEDCDLIYCLPCAKHFHAKGNRAKHVLDFFPSQN
CGNLAQDDGTESMLSTSSSLTRRRSGSGALLGPPLRQTTPQSQQKRRSRL
PLGIPTANIMAENATTQTAVVKSVTGPQYPQTTVLGVNQNHNGGSGRRSS
TLKTPTTTATESHACRMSGSNLGQGPDSSISSMKWSASDFVVGRPLGRGK
FGNVYLARESRTSKSVALKVIFKNSLTGGKSFNLLRREVEIQIRLRHPHI
LRLYGYFHDPKSCFLVLEWASGGELYKHLKALPENRLEESLAAQYMRQVA
LAVQYLHACHVIHRDIKPENLLLAGDLPPSAAPATAGSHGRRSSGSTGVG
VAGVLPADHVLKLCDFGWAVHAPPPDQHWRQTLCGTAEYLSPEMVAGKPY
DCTVDVWALGILAYELLQGKTPFYVPEGENRGAVSMDRGEGREGGGGGKG
VGVAAAAAVAAATEDGDMKKGREEVYARIAAYEGALTFPHPVSVEARSFV
NALLVPDPQDRVSLDAVLRHPWLMEEEDV
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mRNA from alignment at KK037253.1:122749..124704+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9384 ID=rna9384|Name=rna9384|organism=Nannochloropsis gaditana|type=mRNA|length=1956bp|location=Sequence derived from alignment at KK037253.1:122749..124704+ (Nannochloropsis gaditana)
TTTTGCATAGGGCCAAGGTCCAAGGATGACAAGCATATGCGAAGAATGCG
AAGAGATGCCGGCCGCGATGCGCTGTGAAGACTGTGACTTGATATACTGC
CTGCCATGCGCCAAACACTTCCACGCGAAGGGGAATCGAGCAAAGCACGT
CCTtgattttttcccttctcagAACTGTGGCAATCTTGCTCAAGACGACG
GGACTGAGTCAATGTTATCAACGTCATCCTCGCTAACGCGGCGCAGAAGT
GGCAGTGGCGCGTTGCTTGGTCCTCCCCTGCGCCAGACCACGCCCCAGTC
CCAACAGAAACGACGGTCACGCTTACCTCTTGGCATTCCCACAGCGAATA
TAATGGCAGAGAACGCAACAACTCAAACAGCTGTAGTGAAATCAGTGACA
GGGCCTCAATACCCTCAGACTACCGTCCTGGGGGTAAATCAGAACCATaa
tggaggaagcggccgaCGAAGCAGTACCTTGAAGACACCCACAACCACCG
CGACAGAGAGCCACGCCTGCCGAATGTCAGGTTCCAACCTAGGCCAGGGC
CCCGACTCGTCTATATCCTCGATGAAATGGAGCGCGAGCGATTTTGTTGT
GGGGAGGCCCCTCGGCCGGGGAAAGTTTGGCAACGTCTATCTAGCCAGGG
AATCTCGAACGAGCAAGTCGGTCGCGCTCAAAGTCATCTTCAAGAATTCC
TTGACAGGCGGCAAGTCATTTAATCTTCTGCGTCGGGAGGTCGAGATCCA
AatccgtctccgccacccccacATCCTCCGCCTGTACGGCTACTTCCACG
ACCCCAAGTCTTGCTTTCTGGTGCTGGAGtgggcctcggggggggagctC
TACAAGCATCTGAAGGCGCTCCCGGAGAACAGACTGGAAGAAAGCTTGGC
AGCCCAGTACATGCGTCAGGTTGCCCTGGCCGTTCAGTACCTGCACGCCT
GCCACGTGATCCACCGTGACATCAAGCCCgagaacctcctccttgccggc
gatctccctccctccgccgccccagCCACAGCCGGTAGCCATGGCCGACG
TTCGAGTGGAAGcacgggcgtgggcgtggcagGCGTCTTACCCGCGGACC
ATGTCCTCAAACTCTGTGACTTCGGGTGGGCGGTCCATGCACCCCCCCCA
GACCAGCACTGGCGTCAGACCTTATGCGGGACGGCCGAATACCTCTCTCC
CGAAATGGTAGCGGGCAAGCCCTACGACTGCACCGTGGACGTGTGGGCGC
TTGGGATCTTGGCCTACGAGTTGTTGCAAGGGAAGACGCCCTTTTATGTG
CCCGAGGGGGAGAACAGGGGGGCTGTGTCGATGGATAGGGGcgagggacg
ggaaggagggggcggtggcaaaGGGGTCGgtgtggcagcagcagcggcag
tgGCAGCAGCTACCGAGGACGGAGATATGAAGaaagggcgagaggaggTA
TATGCCCGGATCGCTGCTTATGAGGGTGCATTGACGTTCCCACATCCTGT
CTCGGTGGAGGCGCGCTCCTTTGTCAACGCCTTGCTGGTTCCTGACCCGC
AAGACCGCGTGAGTCTGGACGCGGTCTTGCGGCACCCCTGGctaatggag
gaggaagacgtgtaggaaagggggagatagacggggagggatgacTAGAG
ATGTAAACTAGTAGCAATTTAAACATTTTAACAAAGCAGAAATTCATGCA
AGTATCGCACATCTGTTTGCATGCGAGACCCCCCGAATCTGGCATCTACT
CCTATCCTCACCCAGGTCTCTCGGCTCGGCTCGTCTTCATTCCCTTCACC
CTGACGTCGTGATGACGCCCAGAAACGGATTCAGAGCGCAGGGCTTAGAC
AGGGGAAGGCCTGGTAGGCATGGCTAGCcatgaaggagaggcagcCGCCT
TGCCGAGGGGACTGTGACGGCGCGTGATAACAGATACCGATAAAAGCAAG
TGTGGC
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Coding sequence (CDS) from alignment at KK037253.1:122749..124704+

>rna9384 ID=rna9384|Name=rna9384|organism=Nannochloropsis gaditana|type=CDS|length=1590bp|location=Sequence derived from alignment at KK037253.1:122749..124704+ (Nannochloropsis gaditana)
ATGACAAGCATATGCGAAGAATGCGAAGAGATGCCGGCCGCGATGCGCTG
TGAAGACTGTGACTTGATATACTGCCTGCCATGCGCCAAACACTTCCACG
CGAAGGGGAATCGAGCAAAGCACGTCCTtgattttttcccttctcagAAC
TGTGGCAATCTTGCTCAAGACGACGGGACTGAGTCAATGTTATCAACGTC
ATCCTCGCTAACGCGGCGCAGAAGTGGCAGTGGCGCGTTGCTTGGTCCTC
CCCTGCGCCAGACCACGCCCCAGTCCCAACAGAAACGACGGTCACGCTTA
CCTCTTGGCATTCCCACAGCGAATATAATGGCAGAGAACGCAACAACTCA
AACAGCTGTAGTGAAATCAGTGACAGGGCCTCAATACCCTCAGACTACCG
TCCTGGGGGTAAATCAGAACCATaatggaggaagcggccgaCGAAGCAGT
ACCTTGAAGACACCCACAACCACCGCGACAGAGAGCCACGCCTGCCGAAT
GTCAGGTTCCAACCTAGGCCAGGGCCCCGACTCGTCTATATCCTCGATGA
AATGGAGCGCGAGCGATTTTGTTGTGGGGAGGCCCCTCGGCCGGGGAAAG
TTTGGCAACGTCTATCTAGCCAGGGAATCTCGAACGAGCAAGTCGGTCGC
GCTCAAAGTCATCTTCAAGAATTCCTTGACAGGCGGCAAGTCATTTAATC
TTCTGCGTCGGGAGGTCGAGATCCAAatccgtctccgccacccccacATC
CTCCGCCTGTACGGCTACTTCCACGACCCCAAGTCTTGCTTTCTGGTGCT
GGAGtgggcctcggggggggagctCTACAAGCATCTGAAGGCGCTCCCGG
AGAACAGACTGGAAGAAAGCTTGGCAGCCCAGTACATGCGTCAGGTTGCC
CTGGCCGTTCAGTACCTGCACGCCTGCCACGTGATCCACCGTGACATCAA
GCCCgagaacctcctccttgccggcgatctccctccctccgccgccccag
CCACAGCCGGTAGCCATGGCCGACGTTCGAGTGGAAGcacgggcgtgggc
gtggcagGCGTCTTACCCGCGGACCATGTCCTCAAACTCTGTGACTTCGG
GTGGGCGGTCCATGCACCCCCCCCAGACCAGCACTGGCGTCAGACCTTAT
GCGGGACGGCCGAATACCTCTCTCCCGAAATGGTAGCGGGCAAGCCCTAC
GACTGCACCGTGGACGTGTGGGCGCTTGGGATCTTGGCCTACGAGTTGTT
GCAAGGGAAGACGCCCTTTTATGTGCCCGAGGGGGAGAACAGGGGGGCTG
TGTCGATGGATAGGGGcgagggacgggaaggagggggcggtggcaaaGGG
GTCGgtgtggcagcagcagcggcagtgGCAGCAGCTACCGAGGACGGAGA
TATGAAGaaagggcgagaggaggTATATGCCCGGATCGCTGCTTATGAGG
GTGCATTGACGTTCCCACATCCTGTCTCGGTGGAGGCGCGCTCCTTTGTC
AACGCCTTGCTGGTTCCTGACCCGCAAGACCGCGTGAGTCTGGACGCGGT
CTTGCGGCACCCCTGGctaatggaggaggaagacgtgtag
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Synonyms
Publications