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Properties
| Property Name | Value |
|---|
| Product | sulfotransferase 1c2a |
| Orig transcript id | gnl|cribi|Naga_100214g12.6239.mrna |
| Orig protein id | gnl|cribi|Naga_100214g12.6239 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:111149..114599 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9378 ID=rna9378|Name=rna9378|organism=Nannochloropsis gaditana|type=mRNA|length=1463bp
AGCGACTTCGCCTCTCTTCTTCATTCAGGCTTCCTCCCTCAGCACCATGC
AGGGGGCCTTCTATGCTTACTGACTACTCCCGCTCTCCCATATCCTCCTG
ATTTACCCGTAGGCAGGCATAGATCTCGAACCTGGGCTTATTTTAGCGCG
TGGGAGCCGGTGACAGATGACCGAGTACATTCAGACCACCATCGCCGCTA
AGCCGGCCCTGCACGAGCCTCTGAGCAATTTGGGGGACCTGCACGCCCGC
AAACTCTGGCACCAGCTCACAATTGCCCTCCTGTCTTTTCTCAAAGACCC
GAATTATGTCCAGCAAGTTGACTTGCGCGCGCTTTACCAAAATTTTATCG
TCAAATTTGAAGCTAAATTGAACCCCCTCCGTCTGGCCGAAGTGGCAGCC
ACTCTGTCGAAAGCCCTTCTTCCTGATGTGGACGCCGCTCGCGCTTTTCT
CCAGCAGTTTGAGGAGAAACGAGAACGCTACGGTTCGGAAGCTTCCCTGT
TCATAGATATGGAGATTGTCTCGCTAAAGCTGCGCCAAGGGGATGTGAGG
GAGGTGGAACCCAACCTGAAAGCTGCCAAGCTGGTGTTGGAGGGACTGAC
CGGAGCAGATGCGATGGTGTATTCTGCCTACTACAGAGCTGCCTCGGAAT
ACCACAAAATGGTGGGCCCTCCCGAAGCCTTCTACAAGAACGCACTCATG
TACCTAGCCTACACCCCCGTGGAGAGCCTTACGGCAGAGGAGCAGTCCAC
CCTGGCCGTCGACATCTCCCTAGCCGCCTTGACCGGGGACGGGGTCTTCA
ATTTCGGGGAAGTCCTGTCCACGCCCATCCTCTCCGTTCTGGCTCAGGGC
CCGCACGCGTGGCTCTCGGAGCTGCTGCACGTCTTCGACGCGGGCGACGT
AGACCGGTTCGCGGCCCTGGTGGAGAGGCACCGGGAGGAATACTACTCGC
AGCCCGCCCTGGTCAACCGGGAAGAGTTCATCAAGGAGAAGGTGGTCTTG
CTTTCGCTCATAAACCTGGTCTTCGAGACCCCGTCCCACGAGCGGACCAT
CCCTTTCTCCAAAGTGGCCGCCCGGGGACGGATCGGAACGGAGCAGGTGG
AGTGGCTGCTGATGCGCGCTATGTCCCTGGGGCTGATCAAGGGGGTCATC
GACGAGGTTGCTCAGGAGGTGAACGTGTCATGGGTACAGCCTCGGGTCTT
GAACCAGGAGCAGATCAAGCAGCTGGCCGTAAGACTGGAGGGATGGGGGG
GCAAGGTGCAAGAGACGTTGGGTTTCGTGGAAGAGCAGACGCCCGAGTTG
TTTAATTAGCGCAGGGGAGGATAAGGCAGGAGTTGCATTGTGAATGAAGG
GTATAAAGGGCCTAAAAGAAGACATTGGGTCGGTGGATTCCAGGAGGGAA
CGGAAAGGCAGTGGGAAATAAAACTGTCCTCCTCTCCCTTCTGCTCGCGT
TCCGATATAGCCT back to topprotein sequence of rna9378 >rna9378-protein ID=rna9378-protein|Name=rna9378|organism=Nannochloropsis gaditana|type=polypeptide|length=392bp
MNASPFLPPVPPAFPLLPITSDATLRKCKSFPCKSCDIFIASYPKSGTTW
TQNIVYQLLAAAADVAKKDRLNKRRTEHGENEGKAYVGVRSNGGSRSCGE
SALEVVDTQKDVERVDLSIEHISDVAPFYEADRTWDGEGLAARYEAMHAR
LGRRIFNTHLLWGMLPCTGDEERGEGAEGIEREEDSPCYLYIVRDGRDAC
VSFFHHMKSMAKEDGGFEGDFSIFFQEWLEGRLAYGRWTDHVAAWMGRER
ERGRGRNVRVLVVRYEDLKADLTGELKRIARHCGIDVGGGIGEKGEEVWE
AVREKCSFEYMATNRRVYEPRSVTWRDRSFRFMRKGAVGDYRQLFTEDQC
VCFAEAVREAQRKSGQAEACLMRELLGGEEWERGRKEGEERA back to topmRNA from alignment at KK037253.1:111149..114599+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9378 ID=rna9378|Name=rna9378|organism=Nannochloropsis gaditana|type=mRNA|length=3451bp|location=Sequence derived from alignment at KK037253.1:111149..114599+ (Nannochloropsis gaditana)
ACCGGCTCCCACGCGCTAAAATAAGCCCAGGTTCGAGATCTATGCCTGCC
TACGGGTAAATCAGGAGGATATGGGAGAGCGGGAGTAGTCAGTAAGCATA
GAAGGCCCCCTGCATggtgctgagggaggaagcctgaatgaagaagagag
gcgaAGTCGCTTGTCTCTTTTCCGGCAAGTTTGAGCGAGGGTCGATACAT
CGGACAACACCAAGCTCCCAGTTGCGGCTTTGCCTGAAAGCATGCTAAGA
ATACCCAACTGAGCCTAGACGGCGTCTGGTGCTTGGATTTTTGCTGATCG
AACTCAAAGGCTATCGCGAGACGATACGGGAACAAAGGATTAACAGAGCT
CGGGCTGAGGCAAGGAATTAATGCTTCTGGTAATTCGCCTGATGCGCCCG
AGACGCAAACTGCGATCATGCCATTCGAAGGACAGACAGACCCCCCACTA
CTTTTTTGTGATTTTGACAGTCGCAAGCACGAACATCACCACATGACTGG
GACACTGGAAGACACTATGTGTGGCCATCACCCACAGGTCGGGGGTACTC
GCACGGGCtcgcgacctcccccccttttcttgcctCAACCTTTTGCAACC
ATGAAAACACATTATACCGCATATATTTAGCACAGACGTCATGCAAAAAA
GTTAGAGCCTTTGCACGATTTACCCCCCATTCTGTTGCCGCCCGCCATGA
acgcctctccctttttacCTCCCGTCCCAccggcctttcctctccttcct
atCACCTCCGACGCCACGCTTCGGAAATGCAAGTCATTTCCCTGCAAATC
TTGCGACATCTTCATCGCGTCATATCCCAAAAGCGGGACGACGTGGACAC
AAAATATTGTATACCAGCTTCTGGCCGCTGCTGCCGACGTTGCGAAGAAA
GATCGACTcaacaagaggaggacggagcacggggaaaatgaaggaaaggC
CTATGTGGGGGTGCGCAGCAATGGAGGAAGCCGATCCTGCGGGGAGTCAG
CCTTAGAAGTGGTTGACACGCAGAAGGATGTAGAGAGAGTAGATCTGTCT
ATCGAGCACATCAGTGACGTAGCTCCTTTTTACGAGGCGGATAGGACctg
ggatggagagggactGGCTGCCAGATATGAGGCCATGCACGCACGCCTGG
GGCGGCGCATCTTCAACACACACTTACTGTGGGGCATGCTGCCCTGCACt
ggagacgaggaaaggggggagggggcagagggaatagagagggaagagga
ctcGCCCTGCTACCTGTACATCGTCCGTGACGGGCGGGACGCTTGCGTGT
CCTTTTTCCACCACATGAAGAGCatggcgaaggaggacggcggctTTGAA
GGAGACTTCTCAATCTTCTTCCAGGAATGGTTGGAGGGGCGACTGGCCTA
CGGGCGGTGGACGGACCACGTGGCGGCctggatggggagggagcgggaga
gggggcgggggaggaacgtCCGTGTCTTGGTGGTGCGGTACGAGGACTTG
AAGGCGGACCTGACGGGGGAGCTGAAGCGTATCGCCCGGCACTGCGGCAT
CGACGTGGGCGGCGGGataggggaaaagggggaggaggtgtgggaggcaG
TGCGGGAGAAATGTTCCTTCGAGTACATGGCAACAAACCGAAGAGTTTAC
GAACCACGCAGCGTGACCTGGAGGGACCGGAGCTTTCGGTTCATGCGCaa
gggggcggtgggcgaTTATCGACAGCTTTTTACGGAGGACCAATGCGTGT
GCTTCGCCgaggcggtgagggaggcgcagaGAAAGTCAGGGCAGGCAGAG
GCGTGTCTGATGCGAGAATTgctcgggggggaggagtgggagaggggaag
aaaggagggggaagagagggcttGACGGCCAAGTTGCGCGGGTGGCGCCT
GGTACGTCGCAAGTCTGCGTAGAACACAATACATCCTGAAACAAGATTGA
GAGAAAGAACAGAACTGCCCGCGGAAGTATTCCTTGCCCGAGCTTAAGAT
TTCGCCCGAGCCAGAGATGCCTGGCCCTCGTCGCCCTGAGGCCAGAGGAC
ATACACCAGAACCAAGCCGTCCGCTGAcaccacctctcctcccttgccca
aTTCGGCGTCGCCTAAGCGCCGCTGCATGATGTGCCACagacctcccttt
cctcccttcgcaccCCTTGCCGAAGCTTTGTattccacctccctctctcc
gaGAACCACATTACTCCACTCGAGGATGAGTCCTGGCTCTGCCAGGTGAT
TCAGGCCTAAGAGGTGAGAGGTAACTAAAGTATCCAGGCATTCCGCATTT
GACACATGGGCAGCTTCAGGACTAAACAAGTGACAGAACAACCGATTCTT
CATCAGGCCTGTCGAagtcgaggggggaggagcgagggagctggaagaag
aggatgcgtGCCTTGCCCGGCTTGTGACGACGAGAACAGGAACCGGTAAA
TCGTAGAAGGCACGGCTGAAAAAGGAGTCACTAGGGCTAGGTGGAGGAGT
CGAAAGAGGTGGTAGGGCCTGTCGGcaccgcctcccttttttaCCTGTAt
gcacctcgtccacgatCAGAAAAGTTCCCAGCATGAAGGCATCCTGCAAA
TTTCGCTTTCGGGTGTGGTTGACATGGTTGCCTGAAGGGACTTGCCAGGG
TTCATAGAAATCAAGAACGGCGTCGGGGTCCTGAGACGATAATGCCATAA
CACGACGGTCGTCCAAGAAATACTGCCTGGCATCGACGGAATTGAAATGG
TTGAGGGCGTTTTGCCCAATCATGTCCAAACGATTGAATCCACTGGCATG
GTCCATGAGGGCGTTGAAATAGACGTAACAAAAGCCAGTTTGATCGTCCA
TTCGCGTGCGGGGGTCGGCATCTTTTGCAAAGACCATAGTGGGGAAATGC
TCGAGAATGGCGAAGCATAAAGCTTCCTTTTGCTGCTGGTCATGAAGTTC
TATGCCCGTTCCCTGCTCTTCAATGGGCTGATGCTGGATTGATGACGGCA
TATCACATGCGTTCGTGATCGATGAAGCTGCAAGAGAGACATGTTTGGTC
GCAGGCTCCATGGACTAGGCACaggagaggtgggggaggttaacGTCGAT
TCCCACCGGAAGAAGGGCCCGAAATCCCGTGTTCTATCCTTATATAAGTA
TCAGACCCTGCATAAGGTCTACCATGAAATATCATGAGGATCCGTCACAG
GTCTTGAGTGTTCGTATTGATCAGCGAGATGTAACAAACCAtctttgtct
tccccccAGAGGCTGCCTGTGTTCTCCGACCGAGCCAAGGAATCGATCCG
TGCGATCTCTCCTGCCATGGTCACATTCCATCAGACTTTCAAAGCAATAC
CTAAGTCACCGTAACAATATATGCGGCAGCATTAACAGATTATTCCCTTT
AAAGAATCAGATCAAGGCTCCCGCAAGTACATATGTCTAGCTGCTTGATT
G back to topCoding sequence (CDS) from alignment at KK037253.1:111149..114599+ >rna9378 ID=rna9378|Name=rna9378|organism=Nannochloropsis gaditana|type=CDS|length=1179bp|location=Sequence derived from alignment at KK037253.1:111149..114599+ (Nannochloropsis gaditana)
ATGAacgcctctccctttttacCTCCCGTCCCAccggcctttcctctcct
tcctatCACCTCCGACGCCACGCTTCGGAAATGCAAGTCATTTCCCTGCA
AATCTTGCGACATCTTCATCGCGTCATATCCCAAAAGCGGGACGACGTGG
ACACAAAATATTGTATACCAGCTTCTGGCCGCTGCTGCCGACGTTGCGAA
GAAAGATCGACTcaacaagaggaggacggagcacggggaaaatgaaggaa
aggCCTATGTGGGGGTGCGCAGCAATGGAGGAAGCCGATCCTGCGGGGAG
TCAGCCTTAGAAGTGGTTGACACGCAGAAGGATGTAGAGAGAGTAGATCT
GTCTATCGAGCACATCAGTGACGTAGCTCCTTTTTACGAGGCGGATAGGA
CctgggatggagagggactGGCTGCCAGATATGAGGCCATGCACGCACGC
CTGGGGCGGCGCATCTTCAACACACACTTACTGTGGGGCATGCTGCCCTG
CACtggagacgaggaaaggggggagggggcagagggaatagagagggaag
aggactcGCCCTGCTACCTGTACATCGTCCGTGACGGGCGGGACGCTTGC
GTGTCCTTTTTCCACCACATGAAGAGCatggcgaaggaggacggcggctT
TGAAGGAGACTTCTCAATCTTCTTCCAGGAATGGTTGGAGGGGCGACTGG
CCTACGGGCGGTGGACGGACCACGTGGCGGCctggatggggagggagcgg
gagagggggcgggggaggaacgtCCGTGTCTTGGTGGTGCGGTACGAGGA
CTTGAAGGCGGACCTGACGGGGGAGCTGAAGCGTATCGCCCGGCACTGCG
GCATCGACGTGGGCGGCGGGataggggaaaagggggaggaggtgtgggag
gcaGTGCGGGAGAAATGTTCCTTCGAGTACATGGCAACAAACCGAAGAGT
TTACGAACCACGCAGCGTGACCTGGAGGGACCGGAGCTTTCGGTTCATGC
GCaagggggcggtgggcgaTTATCGACAGCTTTTTACGGAGGACCAATGC
GTGTGCTTCGCCgaggcggtgagggaggcgcagaGAAAGTCAGGGCAGGC
AGAGGCGTGTCTGATGCGAGAATTgctcgggggggaggagtgggagaggg
gaagaaaggagggggaagagagggcttGA back to top
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