|
|
Properties
| Property Name | Value |
|---|
| Product | protein phosphatase 4 regulatory subunit 1 |
| Orig transcript id | gnl|cribi|Naga_100075g1.2869.mrna |
| Orig protein id | gnl|cribi|Naga_100075g1.2869 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:88683..90964 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9372 ID=rna9372|Name=rna9372|organism=Nannochloropsis gaditana|type=mRNA|length=991bp
GATGTCTCTATCACCTCTACAAAGGTCCCCTCTCCCATAGTCATGCCCCC
AGAAATTCTCAATTATGTCCATGTGATCCTATCCTAGCTTATTTTTTTGG
GAAAAAGTTGTGGATGTCTCTGAACAGCCGTCCTGTCGCCCGTCATGAAA
ACAGCATTACCGCCTGGAGGAAAAGCCTAGTAGGAGTGGGAGCACTGGGG
AAATTTCTTTCACTTTGCCAGGCCTTCAGCCCGTTGAGCTCCACCACACC
CTAATCAAAAACACCAGACACGAATTGAACTGTGGGAGAGATGGTTTGCG
ATGCGTGTGAGAAAAAGCTTGGCAAACTCTGCGTCCCGGATAAGTGGAAA
GAAGGCAGTCGCAATGTGACCGGCGGGAAAGACGGGGGCCGGGTCCCCAC
TTCCAGCGGTCCCTCTGCCTCCTTGAATAAATTATCGGAAAAGCGCAAGG
CCCGCTTGGCGGAAGCAGGCGGAGGCTTGGGAAGGCAGTGTCGCATTTGT
AAGGTGCGCATCATGGACGTGCAGCGGCATTACTGCAACGGGTGTGCATA
CAAGAAAGCAATTTGTGCCATGTGCGGGAGAAAGGTCGGCGACACAAAGC
TCTACAAAATGAGCAGCAAATGAAATGGCAGGATCTGAGCTTTCGAGCGA
GTAAGGTGTCTTTCAATGATTCTACACCAGGATGTAGCACGTGTACAGTT
TTGCTGATAGATTTCCACCTGTGAGAATTGCCTTGTTTTTTCGCAAATTG
CGCATCGAAAGTAACCTCACAAAATGAAGTACGCCGTGAAAGCAGTGGTT
TGCTCGGTGATTTCTCATTTGGAAATCAAATGGACATCCGCCATCCGAAA
AGTGGTTTGAATTCCTCTTTAATTCAAGCTTAACATTCTCTTCTAAAGTC
AATGGAACACAAATGCTATTATTGTCACTGGCTGGGCAAAGTCCACTTCA
CTAAGAAAATAAAAGGTACGAAAAATTTGAAAAATAGCACC back to topprotein sequence of rna9372 >rna9372-protein ID=rna9372-protein|Name=rna9372|organism=Nannochloropsis gaditana|type=polypeptide|length=413bp
MEGEPQTATFEDLSIDDSLGALARVRQYGTSAIALQRLVHVKMLTDAAES
VPYESIQTDLFPLLRALSMDNEWVIRQHLGEQLGGVAAACLREAEGEDGP
GYRGIIESILPLIQTLLNDSQDEVRQSSGASLCHICSLLAPEDRGRRALT
LALQLAHDDEQEDLRMTAAKLLNDMVEILGPDLCTQFVSPELVSLAEDPV
FRVRKAAALALHSACRVAGEADAVDRLLPAFIRLTKDDIYRVRKACAEAL
VDMSTAVSPGLRGHVLLEVFTRLAGDASKLVRQAAMQQLGPFLSTLPAAK
VSDALLEMFAGMAAADTGDPTLDRDMRGYCAYNLPGVMAAVGPSRWRPFL
KEAYGRLVRDGVWTVRRTLACSLHEMVRVMGGEGRGRRGGRERRWRGGGV
AGKRGVWRATRSG back to topmRNA from alignment at KK037253.1:88683..90964+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9372 ID=rna9372|Name=rna9372|organism=Nannochloropsis gaditana|type=mRNA|length=2282bp|location=Sequence derived from alignment at KK037253.1:88683..90964+ (Nannochloropsis gaditana)
AAACACTGGATTCTGTCTTCGAGGCAGCGGATAGCACGTGCGGGCGGACG
AAGCCTTGGTCAGGCGTGTGGGGCCCCAAGTCGGAACAATCGAGCtgggc
aggcagggaggctcGAGGCCGCCTGTCGGGACAGGGACGACAGGTTTGGG
CCTGCCTGCCTCGTTCAAAGACAAGCCAAAGGCTTGTCTGGGTGGGAATC
AAGAGGCCTGGTGCTCCCAGGAATTGCGGCTTGCTCTGCATTACATAGCC
AGCCCATCCCCCCCACGTTGCCGCACTCCCGGGGCGCGCACGCCAACCTC
TGAGACCCGACGCCTTGTCCACACACACCGTCTGCACGTCGTTCTTTTtc
atggagggggagcccCAAACAGCGACCTTTGAGGACCTATCCATCGACGA
CTCGCTGGGGGCCCTGGCCCGCGTCCGCCAATACGGGACTAGCGCCATTG
CCCTGCAGCGTCTGGTGCACGTGAAGATGCTGACGGATGCCGCGGAAAGC
GTCCCGTACGAGTCAATCCAGACCGACCTCTTCCCGCTGCTGAGGGCGCT
GAGCATGGACAATGAGTGGGTGATCCGGCAGCACCTGGGGGAGCAGCTTG
GCGGGGTGGCGGCAGCCTGCCTCCGCGaagccgagggcgaggacgggcct
GGCTACCGGGGAATCATCGAGAGCATCCTTCCCCTAATCCAGACACTCCT
GAATGACTCCCAGGACGAGGTCAGGCAGAGCTCGGGCGCCAGTCTTTGCC
ACATCTGCAGTCTCCTCGCGCCCGAAGACCGGGGCCGGCGCGCTCTCACC
CTGGCCTTGCAGCTCGCGCACGacgacgagcaggaggattTGAGGATGAC
AGCGGCCAAGCTGCTCAATGACATGGTCGAGATTCTTGGTGCGTGCGCAT
GGGCCCCCGTTCGAGCCTTACCGCGAAagctccgctccctcccacctcct
ctcctgccctcccgcttcttcccttcctttcctctcaaccccctcccccc
ctcccctcccgacaGGCCCTGACCTGTGCACGCAGTTCGTCTCCCCCGAG
CTCGTCTCCCTGGCCGAGGACCCCGTCTTCCGGGTccgcaaggcggcggc
cctggccctccACTCCGCCTGCCGCGTGgccggggaggcggacgcggtgg
accggctcctccccgccttcatcCGGCTGACCAAGGACGACATCTACCGC
GTCCGCAAGGCCTGTgcggaggccctggtcgACATGAGCACGGCCGtctc
ccccggcctccgtggccacgtcctcctcgaggtCTTCACGCGCCTGGCGG
GGGACGCGAGCAAGCTGGTGCGGCAGGCAGCCATGCAGCAGCTGGGGCCC
TTCCTCAGCACCCTGCCCGCCGCCAAGGTCTCGGACGCCCTCCTAGAGAT
GTTCGCGGGCATGGCGGCCGCTGACACGGGGGACCCGACCCTGGACCGAG
ACATGCGCGGCTACTGTGCCTACAACCTGCCGGGCGTGATGGCCGCGGTG
GGCCCGTCCCGCTGGCGGCCCTTCCTCAAGGAAGCCTACGGGCGCCTGGT
CCGCGACGGGGTGTGGACCGTGCGGAGGACCTTGGCCTGCTCCCTGCACG
AGATGGTGCGCGtgatggggggggagggccggggccggagggggggccgg
gaaagacgatggaggggcggaggggtggcggggaagaggggggttTGGCG
GGCGACGCGGAGCGGCTAGAAGTGTGTGGTGCGGAtagggagtggaggga
gaaaggtgGCAGCAGCGAGCCgatgcagggaggagagcccagggcggggg
ggccgggggacgaggaggatgagaagggcaaaggggtggagagcgaggtg
ggggggagggcggaggggcgggacggTGGCGACGAGGACCTGATGCAGTG
CCCCGGGCCCGAacgcgtggagagggagcttGTCTTCGCCCTGGACGCTT
TCCTCCAGGACGTTGAGGACGTGCGCATGGGGGCGCTCCAGCACCTCGCC
GccaccctcgccctcctgcctccgccctcgcGCCAGGCCTACCTGCCCGT
CCTCTGCGAGCTGGTCACGCGCACGCCCGCCTGGCAGTGGCGcccccgcc
acgccctcgcccgccagcttcccggcctcctcccgctctaCGGGGGCCGG
GCCCTGCACGCCGTCTTCGGACCCCtggccttcgccctcctggaGGATCC
TGTCGCGGCAgtgagggcggaggccgtACCGGCCTTCGGACCGCTCTATG
ACGCCTTCtcccgggaggagaggggggagatc back to topCoding sequence (CDS) from alignment at KK037253.1:88683..90964+ >rna9372 ID=rna9372|Name=rna9372|organism=Nannochloropsis gaditana|type=CDS|length=2484bp|location=Sequence derived from alignment at KK037253.1:88683..90964+ (Nannochloropsis gaditana)
atggagggggagcccCAAACAGCGACCTTTGAGGACCTATCCATCGACGA
CTCGCTGGGGGCCCTGGCCCGCGTCCGCCAATACGGGACTAGCGCCATTG
CCCTGCAGCGTCTGGTGCACGTGAAGATGCTGACGGATGCCGCGGAAAGC
GTCCCGTACGAGTCAATCCAGACCGACCTCTTCCCGCTGCTGAGGGCGCT
GAGCATGGACAATGAGTGGGTGATCCGGCAGCACCTGGGGGAGCAGCTTG
GCGGGGTGGCGGCAGCCTGCCTCCGCGaagccgagggcgaggacgggcct
GGCTACCGGGGAATCATCGAGAGCATCCTTCCCCTAATCCAGACACTCCT
GAATGACTCCCAGGACGAGGTCAGGCAGAGCTCGGGCGCCAGTCTTTGCC
ACATCTGCAGTCTCCTCGCGCCCGAAGACCGGGGCCGGCGCGCTCTCACC
CTGGCCTTGCAGCTCGCGCACGacgacgagcaggaggattTGAGGATGAC
AGCGGCCAAGCTGCTCAATGACATGGTCGAGATTCTTGGCCCTGACCTGT
GCACGCAGTTCGTCTCCCCCGAGCTCGTCTCCCTGGCCGAGGACCCCGTC
TTCCGGGTccgcaaggcggcggccctggccctccACTCCGCCTGCCGCGT
GgccggggaggcggacgcggtggaccggctcctccccgccttcatcCGGC
TGACCAAGGACGACATCTACCGCGTCCGCAAGGCCTGTgcggaggccctg
gtcgACATGAGCACGGCCGtctcccccggcctccgtggccacgtcctcct
cgaggtCTTCACGCGCCTGGCGGGGGACGCGAGCAAGCTGGTGCGGCAGG
CAGCCATGCAGCAGCTGGGGCCCTTCCTCAGCACCCTGCCCGCCGCCAAG
GTCTCGGACGCCCTCCTAGAGATGTTCGCGGGCATGGCGGCCGCTGACAC
GGGGGACCCGACCCTGGACCGAGACATGCGCGGCTACTGTGCCTACAACC
TGCCGGGCGTGATGGCCGCGGTGGGCCCGTCCCGCTGGCGGCCCTTCCTC
AAGGAAGCCTACGGGCGCCTGGTCCGCGACGGGGTGTGGACCGTGCGGAG
GACCTTGGCCTGCTCCCTGCACGAGATGGTGCGCGtgatggggggggagg
gccggggccggagggggggccgggaaagacgatggaggggcggaggggtg
gcggggaagaggggggttTGGCGGGCGACGCGGAGCGGCTAGatggaggg
ggagcccCAAACAGCGACCTTTGAGGACCTATCCATCGACGACTCGCTGG
GGGCCCTGGCCCGCGTCCGCCAATACGGGACTAGCGCCATTGCCCTGCAG
CGTCTGGTGCACGTGAAGATGCTGACGGATGCCGCGGAAAGCGTCCCGTA
CGAGTCAATCCAGACCGACCTCTTCCCGCTGCTGAGGGCGCTGAGCATGG
ACAATGAGTGGGTGATCCGGCAGCACCTGGGGGAGCAGCTTGGCGGGGTG
GCGGCAGCCTGCCTCCGCGaagccgagggcgaggacgggcctGGCTACCG
GGGAATCATCGAGAGCATCCTTCCCCTAATCCAGACACTCCTGAATGACT
CCCAGGACGAGGTCAGGCAGAGCTCGGGCGCCAGTCTTTGCCACATCTGC
AGTCTCCTCGCGCCCGAAGACCGGGGCCGGCGCGCTCTCACCCTGGCCTT
GCAGCTCGCGCACGacgacgagcaggaggattTGAGGATGACAGCGGCCA
AGCTGCTCAATGACATGGTCGAGATTCTTGGCCCTGACCTGTGCACGCAG
TTCGTCTCCCCCGAGCTCGTCTCCCTGGCCGAGGACCCCGTCTTCCGGGT
ccgcaaggcggcggccctggccctccACTCCGCCTGCCGCGTGgccgggg
aggcggacgcggtggaccggctcctccccgccttcatcCGGCTGACCAAG
GACGACATCTACCGCGTCCGCAAGGCCTGTgcggaggccctggtcgACAT
GAGCACGGCCGtctcccccggcctccgtggccacgtcctcctcgaggtCT
TCACGCGCCTGGCGGGGGACGCGAGCAAGCTGGTGCGGCAGGCAGCCATG
CAGCAGCTGGGGCCCTTCCTCAGCACCCTGCCCGCCGCCAAGGTCTCGGA
CGCCCTCCTAGAGATGTTCGCGGGCATGGCGGCCGCTGACACGGGGGACC
CGACCCTGGACCGAGACATGCGCGGCTACTGTGCCTACAACCTGCCGGGC
GTGATGGCCGCGGTGGGCCCGTCCCGCTGGCGGCCCTTCCTCAAGGAAGC
CTACGGGCGCCTGGTCCGCGACGGGGTGTGGACCGTGCGGAGGACCTTGG
CCTGCTCCCTGCACGAGATGGTGCGCGtgatggggggggagggccggggc
cggagggggggccgggaaagacgatggaggggcggaggggtggcggggaa
gaggggggttTGGCGGGCGACGCGGAGCGGCTAG back to top
|