rna9365, rna9365 (mRNA) Nannochloropsis gaditana

Overview
Namerna9365
Unique Namerna9365
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2002
Alignment locationKK037253.1:70561..73098 -

Link to JBrowse

Properties
Property NameValue
Productsolute carrier family 35 member b1
Orig transcript idgnl|cribi|Naga_100075g10.2882.mrna
Orig protein idgnl|cribi|Naga_100075g10.2882
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:70561..73098 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100075g10gene9082Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9365rna9365-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21348.1cds9335Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9365 ID=rna9365|Name=rna9365|organism=Nannochloropsis gaditana|type=mRNA|length=2002bp
TTCAGAGAAGAAGTCAACAGGATCGAGGGCACTGGAAAGGCGGGAAGTGC
AACGCCCGCAGCCCGCCCATCGAGGCAGTATATCTTTTGAGATACAATTG
AGATCCTCATGGAACCCAGTATTTTGTTCGTACCCTTTCAGGTGAAAAAC
CAAGAGACGGACAAAAACGACATCACACCGCAGCACCATTTCTCATCCTA
TATAGTACCATGGCGCTGCCCACCCTGGAAACAATTAAGGGCATGAAGGT
CGCTGAGCTTAAGAAGGAATTGGAGAAGCTCGATTTGTCTGTGAAGGGGC
TGAAAGCAGACTTAATGCAGCGACTCATGCAGCACGTCGAGAAGGCAGCC
GCCGCCGAGGAAGGGGGCAGTGACGACGTTGATGGCTTAAACGACAAACC
GGAGCCCCAAGACGAGACTTTGAAGCCTTCTGTGAAGGCTATTGTCGAGG
AGGAATTGGTAGGCACTGCATCGAAAGGTCCGTCTGGATCCTCGCGCGAG
AAGGAGCAGGAAGGGGAGGTAATGGCGGAGGCTGCCCCGTCTGCCGTCCA
CCCAAGTCCCAGCCCCGCCCCGGCCAACCCCTCGGAGCTCGAGCACAATC
CCGATCGAGGAATAGAGAAGGAGAAACCTTCCCATCTGACCTCGCCAGCC
GAGGCCTCGGCGGCGCCACAAGCCGCTGAGCCTTCTGAGATCGGGAGCTC
CCTGCGGCAGGTTGCGGATGCCCTGCCCTCTTCTCCCTCCTCGGCCACTG
TGCCGAGCGAGTCAGCCCAGTCGTCTGACATGGCGGCGGCAGTGACCCAG
AAGGGACACGCTTCACCTGCCCCGATTGATGCTGAGGTGAAGAAAGGCAC
AGGTCCGAGTGAGACCGCCCTCCTGGCCAGGGAGGAGTCTCTGTCCGGCG
CTGATGCCCCTGAGCCCGCCGCCGCCCTTGTGCCAGCCCCAAAGAATCCG
AGAAGCGCCACCATCCGCGTGGACGGCTTCATCCGTCCCTTCCGCCTGGT
GGCGGCCAAGGAGATGCTGGAGGAGCGGGGAGGGGGCCCTCTTGTTGGAG
AGGATGGCATGTGGATGGATGTGATCAAGACGCACTGTTACGCCACCTTC
CAGTCGGAGGAGTGCGCGGCGCGAGCACGGATTGCATTGCACAAGTACCA
GTGGCCGGAGCGGGGGGGCGTCCTGACCGCCGATTTCTCGCCCAAGACCG
CGGCCCAGGTTACGGAGGAGGACAAGCTCCTCAAGAAGGCGCGCGCGGCC
TCCAGGCTCCAGGAAGGAGGGGACAAGACAGGCGGGGCGAGGCCGGGGGA
GCCTCTGGCGGCCACGCCCCGTACGACTGCCCTCGCGGCGGCGAGCGCGG
AGACGCAACGGGTCAGCAACAGCCTCGTGCCCCCCCCCGCCCCCTTCGAG
GCTCCACCGCATCTGGGGGGGGCGGAATCGGGGGGTTCGGTACGGCGGAA
GCGGGAGTTAGGGCCCTCACCCGAGAGGATTGTGAGGGCGAGACGCGATG
CGGAGGGGGCGAAAGAAGCAGTGAAAGAGGAGGAGGACGAGAAGCCCGCG
ATGCCCACACTGGAGGAGCTTTTCCGCTCCACATCCACCCCGCCCAAGCT
GTACTGGACGCCGGTGCCTGAGGACCAGGTCGCGCGGAAGCGAGAGCGGC
TGAAGGAGCTGAAGGCGGAAGCAAAGCTGGAAGCCAAAAAGCGCGAGGCG
GCGGGAGGTGTTAGGCAGCCTGCGGCGGACAGGCGCTGGGCGGGTCGGGA
TGGAGGGGGTGGGGGGGGCTATAGGTCGCGGAACCGCTCACCGCCACGCA
GGCGCTGGTAGAACATTTGAAGGTGGGGCGGGCAAGCAGGAGTGATGGAT
GTGGGGGGGAAGGGAGGCACGAAAAAACATTCGGACGGGGTCGTTTCAGA
CGCCCGCAGGGGCAAGCGTGGGGCCGGGCGAAAACTTTGACGGTAAGAGC
GACACATTTAAAAAAGAGAAGCTGTGCTAAAATCTTGGAACGGCGGCGTC
TA
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protein sequence of rna9365

>rna9365-protein ID=rna9365-protein|Name=rna9365|organism=Nannochloropsis gaditana|type=polypeptide|length=390bp
MAGSTLKDLCVCGPKILLPFLGGAVAALIAVYADWAIFKRRAGPAGKGNE
KQEKEKGGLSLDALPSEVKLLICAGGIYASYLTFGVLQEQIFKYRGPQGE
RFTATLFLLWVQCLVNALFALAFMLAGSRSSQKIPLFNFGLTGTSYILAM
LFSNEALKYVSYPTQALGKSCKMVPVMLFGVLIRGKKYRPIEYFCVFLVT
LGITMFQLYGGKKKGGHGGGKVEEGDSLYGVLLLLLSLVMDGVTGAVQDK
LKTICRPTVHEFMFYTNMAGVLVCSVLVLPTGQFVQGTRFCLEHPALFST
MAWLSLTSALGQNFIFLTIKYFDALVLTTVTTTRKFFTILVSVVMYGHAL
NSKQWLAVLLVFCGLSGEVYDKYEKKKAQRAKTALEGKKK
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mRNA from alignment at KK037253.1:70561..73098-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9365 ID=rna9365|Name=rna9365|organism=Nannochloropsis gaditana|type=mRNA|length=2538bp|location=Sequence derived from alignment at KK037253.1:70561..73098- (Nannochloropsis gaditana)
TCCGAGGCTTCGCAATCTGCACCCACGGAAACTCCTATCGCTTGTTATAT CCTGCCCATTCCTGTCTTGGTCTGCTCATCCGTCTTCCCTCGGATGGGGC GAGGACGCACGTTTCCCCAGGATGTGCCGCCGCTTCCTTCTATGACCTGC CTCCCACCCCCCTTTGCTGCGTACCTCGGGCCCCAAGTATACGTTGTGGA ACGCCGTACTTCCTCTCCTTTATTCTTTGGCTAAGGTTCTGCGAGGAGAA ATGTGCGCGATTTAAGAATTCCCAGCCACTTGACTGACAACCACCCCTCG GGCCGTGCCCCCCCCCTCCTTGGCCCCTCCCCCTTCAACAGCAACTGCTT TCGTGGCCGCCGTCGCGCTTCTCACCCTCCAACTCACGCTCTTTGCGCAT TCCTTGTCATCGTTACACATACGTCACACACAAACAGCCAATACTTCCTG TGAACGTACCCAGCTATGGCGGGGAGCACTTTGAAAGACCTTTGCGTTTG TGGTAAGTGGAGCGGTAGGAGGGAGGCTTGAAGTTTGCAAGTCAGGGAAG CGTGACGGTGCTCATTGTGATGAATACGAAGTGAGCAAGCGCTTCCGCTT AGGTTGTACGATATAAGTATGATGTTTGTCATAAGACGTCACAAGAGCTT AAAGATATGTTTGAAATGGGAATACAAGAGAGGAGAAGTCTCGAAGCCGT GCTCCGGCATGAAGTGGTAGACATCGCGAGTAGCGTATTCGCTTCCCTCG ACCGGACGGCTAAGCCATTGTAATTGAATTTTTCTCGAAAATGAAGTGTT TAGGGGACCTCCAGCTTTATTGGGGAATACCAGAGATAGACTTGAAAAGT TGTCATCGTGTGCTCTTTTCTCCCCCCTCACCTAGGCCCCAAGATCCTTC TTCCCTTCCTTGGGGGAGCAGTCGCAGCCCTCATTGCCGTCTATGCAGAC TGGGCAATCTTCAAGCGCCGGGCTGGACCCGCAGGCAAGGGCAATGAGAA GCAAGAAAAGGAGAAGGGAGGCCTCAGCCTTGATGCCTTGCCTAGCGAGG TCAAGCTCCTCATATGTGCTGGCGGCATCTACGCCTCCTACCTGACGTTC GGGGTCTTGCAGGAGCAGATATTCAAGTACCGGGGCCCACAAGGAGAGCG TTTCACGGCCACGCTCTTCCTCCTCTGGGTCCAGTGCCTGGTGAACGCCC TCTTCGCCCTGGCCTTCATGCTCGCCGGGTCGCGGAGCTCACAGAAGATT CCCCTTTTCAACTTTGGCCTGACTGGCACGTCCTATATCCTGGCGATGCT CTTCTCGAATGAGGCGCTCAAGTACGTCTCCTACCCGACGCAGGCGCTGG GCAAGTCCTGCAAAATGGTGCCGGTCATGCTCTTCGGGGTGCTGATCCGC GGGAAGAAGTATCGGCCGATCGAGTACTTTTGCGTGTTCCTGGTGACCCT GGGCATCACCATGTTTCAGCTCTATGGAGGAAAGAAGAAGGGTGGCCACG GAGGCGGGAAAGTGGAGGAGGGGGACTCGTTATACGGCGTACTGCTGCTC CTGCTCTCCCTGGTAATGGACGGGGTGACGGGGGCGGTCCAGGACAAGCT GAAGACGATATGCAGGCCCACGGTGCACGAGTTCATGTTCTACACAAACA TGGCCGGCGTCCTCGTCTGCTCCGTCCTCGTCCTCCCCACGGGCCAATTC GTCCAGGGCACCCGCTTCTGCCTCGAGCACCCCGCCCTCTTCTCCACCAT GGCCTGGCTCTCCCTCACCTCGGCCCTGGGCCAGAACTTCATCTTCCTGA CCATCAAGTACTTCGACGCGCTCGTCCTGACCACGGTGACTACCACCCGC AAGTTCTTCACCATCCTAGTGTCTGTGGTCATGTACGGACACGCCCTCAA CAGCAAGCAGTGGCTGGCGGTGCTCTTAGTATTCTGCGGCCTCAGCGGGG AGGTTTATGACAAGTACGAGAAGAAGAAGGCGCAGCGAGCAAAGACGGCT CTGGAGGGTAAAAAAAAATGAGTGGAGAAAAAAATACAAGAGACGCAAAA TGGTTGAAAAGCGTAGACTGGAGATGGGGAAAGGATACCGCTAGGCTCCA CTAGGGATGTGGGTCTGTGGGGCTGCGACTCGGCGATTCGAGAGATGTTG TTGGCTGTATTGGCGAGGATACCAGGAAAGTGATATGATGCAATATAGGA TCGGTCAGCGGGGAAGTCGTTGACCTTAACGTGTCACAGGGAGGAAAGCC GGTGGAGGCCGGCCGGGAGTATTACATTGAGGGCCACGGTGCGCATTTCG ACCCTAATCAACCAGGCGCATCGCGATCTCCGACCTGCCATGTGCTCTTT TTTGGGAAAATGCGTGACGGATGCTTGCGTGTGTAATTAAAAATGAAAAG CACAACCAGCTCGGAACGAAACAAGACGTAGTGAAGTGTGCCCCCGGCTA CGCTCAATCCCGTAAAGCAATCTCTCACTCATCCAACAGCGACAAGCCAC TCAAGTAGACGCCGCCGTTCCAAGATTTTAGCACAGCT
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Coding sequence (CDS) from alignment at KK037253.1:70561..73098-

>rna9365 ID=rna9365|Name=rna9365|organism=Nannochloropsis gaditana|type=CDS|length=2346bp|location=Sequence derived from alignment at KK037253.1:70561..73098- (Nannochloropsis gaditana)
GCCCCAAGATCCTTCTTCCCTTCCTTGGGGGAGCAGTCGCAGCCCTCATT
GCCGTCTATGCAGACTGGGCAATCTTCAAGCGCCGGGCTGGACCCGCAGG
CAAGGGCAATGAGAAGCAAGAAAAGGAGAAGGGAGGCCTCAGCCTTGATG
CCTTGCCTAGCGAGGTCAAGCTCCTCATATGTGCTGGCGGCATCTACGCC
TCCTACCTGACGTTCGGGGTCTTGCAGGAGCAGATATTCAAGTACCGGGG
CCCACAAGGAGAGCGTTTCACGGCCACGCTCTTCCTCCTCTGGGTCCAGT
GCCTGGTGAACGCCCTCTTCGCCCTGGCCTTCATGCTCGCCGGGTCGCGG
AGCTCACAGAAGATTCCCCTTTTCAACTTTGGCCTGACTGGCACGTCCTA
TATCCTGGCGATGCTCTTCTCGAATGAGGCGCTCAAGTACGTCTCCTACC
CGACGCAGGCGCTGGGCAAGTCCTGCAAAATGGTGCCGGTCATGCTCTTC
GGGGTGCTGATCCGCGGGAAGAAGTATCGGCCGATCGAGTACTTTTGCGT
GTTCCTGGTGACCCTGGGCATCACCATGTTTCAGCTCTATGGAGGAAAGA
AGAAGGGTGGCCACGGAGGCGGGAAAGTGGAGGAGGGGGACTCGTTATAC
GGCGTACTGCTGCTCCTGCTCTCCCTGGTAATGGACGGGGTGACGGGGGC
GGTCCAGGACAAGCTGAAGACGATATGCAGGCCCACGGTGCACGAGTTCA
TGTTCTACACAAACATGGCCGGCGTCCTCGTCTGCTCCGTCCTCGTCCTC
CCCACGGGCCAATTCGTCCAGGGCACCCGCTTCTGCCTCGAGCACCCCGC
CCTCTTCTCCACCATGGCCTGGCTCTCCCTCACCTCGGCCCTGGGCCAGA
ACTTCATCTTCCTGACCATCAAGTACTTCGACGCGCTCGTCCTGACCACG
GTGACTACCACCCGCAAGTTCTTCACCATCCTAGTGTCTGTGGTCATGTA
CGGACACGCCCTCAACAGCAAGCAGTGGCTGGCGGTGCTCTTAGTATTCT
GCGGCCTCAGCGGGGAGGTTTATGACAAGTACGAGAAGAAGAAGGCGCAG
CGAGCAAAGACGGCTCTGGAGGGTAAAAAAAAATGAATGGCGGGGAGCAC
TTTGAAAGACCTTTGCGTTTGTGGCCCCAAGATCCTTCTTCCCTTCCTTG
GGGGAGCAGTCGCAGCCCTCATTGCCGTCTATGCAGACTGGGCAATCTTC
AAGCGCCGGGCTGGACCCGCAGGCAAGGGCAATGAGAAGCAAGAAAAGGA
GAAGGGAGGCCTCAGCCTTGATGCCTTGCCTAGCGAGGTCAAGCTCCTCA
TATGTGCTGGCGGCATCTACGCCTCCTACCTGACGTTCGGGGTCTTGCAG
GAGCAGATATTCAAGTACCGGGGCCCACAAGGAGAGCGTTTCACGGCCAC
GCTCTTCCTCCTCTGGGTCCAGTGCCTGGTGAACGCCCTCTTCGCCCTGG
CCTTCATGCTCGCCGGGTCGCGGAGCTCACAGAAGATTCCCCTTTTCAAC
TTTGGCCTGACTGGCACGTCCTATATCCTGGCGATGCTCTTCTCGAATGA
GGCGCTCAAGTACGTCTCCTACCCGACGCAGGCGCTGGGCAAGTCCTGCA
AAATGGTGCCGGTCATGCTCTTCGGGGTGCTGATCCGCGGGAAGAAGTAT
CGGCCGATCGAGTACTTTTGCGTGTTCCTGGTGACCCTGGGCATCACCAT
GTTTCAGCTCTATGGAGGAAAGAAGAAGGGTGGCCACGGAGGCGGGAAAG
TGGAGGAGGGGGACTCGTTATACGGCGTACTGCTGCTCCTGCTCTCCCTG
GTAATGGACGGGGTGACGGGGGCGGTCCAGGACAAGCTGAAGACGATATG
CAGGCCCACGGTGCACGAGTTCATGTTCTACACAAACATGGCCGGCGTCC
TCGTCTGCTCCGTCCTCGTCCTCCCCACGGGCCAATTCGTCCAGGGCACC
CGCTTCTGCCTCGAGCACCCCGCCCTCTTCTCCACCATGGCCTGGCTCTC
CCTCACCTCGGCCCTGGGCCAGAACTTCATCTTCCTGACCATCAAGTACT
TCGACGCGCTCGTCCTGACCACGGTGACTACCACCCGCAAGTTCTTCACC
ATCCTAGTGTCTGTGGTCATGTACGGACACGCCCTCAACAGCAAGCAGTG
GCTGGCGGTGCTCTTAGTATTCTGCGGCCTCAGCGGGGAGGTTTATGACA
AGTACGAGAAGAAGAAGGCGCAGCGAGCAAAGACGGCTCTGGAGGGTAAA
AAAAAATGAATGGCGGGGAGCACTTTGAAAGACCTTTGCGTTTGTG
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Synonyms
Publications