rna9350, rna9350 (mRNA) Nannochloropsis gaditana

Overview
Namerna9350
Unique Namerna9350
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1369
Alignment locationKK037253.1:38910..39761 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100075g26.2865.mrna
Orig protein idgnl|cribi|Naga_100075g26.2865
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:38910..39761 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100075g26gene9067Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9350rna9350-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21331.1cds9320Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9350 ID=rna9350|Name=rna9350|organism=Nannochloropsis gaditana|type=mRNA|length=1369bp
CAATGACACTCAAAATATGTCCTCTCGTGTTGAGCCAAGGACAGTGAGGC
AGGCGCGTTGTGAAAGTGGTAAGACCTTCTCCTCTCATGCGAGCACGAGG
ATGGGAATGAGACGTCCCATCAGTCGCGGCATAAGAGGATACACAGACCC
TATCCCAGCCCCCGAGGAAGGGGCTACGAATACATGTCACGCCCTGTGCG
GTCCAGAGGACAGAGGCTTTATGTGTGCCGCCACCGGTAGCATCTAATAC
CTGATCACAAGCATATAGTGCACTGCTTACAGTTTTTCCCCGCAATGCCA
GGACGCACGCTGCTGTTGACCTGAACAGGAAAAGAACGTCAACTCGAGTC
GTGTGAAGGGCGGCGCGCCGTGGCTAGTGCAGCAAGTTGTGCCGAAGAGT
TTTTTTGAAAATCCAAGAAGTAATGCAAACATAGCAAAGCACTGCTTGTC
AAGGCTAAGCTACAAGTACTCACACAGAACTTATTTTTCGATTTTCGAAA
TAATGCGTGTAAAGGAAATCCCCATGCTGGAGGACAACTATGGATATTTG
GTCGTTGACGATGCTACAAATCAGGCGGCGGCCATTGACCCTGTCGAGCC
AGATAAGGTCCTTGCCGCAGCCTCGAAAGCCGGCGCCCTCATCACCCACA
TCTTGACCACGCACAAACATTGGGACCACGCAGGTGGCAACAGCGAGATG
CGCAAAGTATTGCCTGACGTTCCTGTGCTGGGTGGAGCCGGTGATGGCGT
TGCCGCGTGCACATGGCAGGTGCAGGAGGGCGAGGTTTTTCGAATCGGGC
GAGACCTTCGGGTCGAGTGCTTGCTCACTCCCGGCCACACCATGGGCCAC
ATATGTTACGCAGTCACGGACGAGCGAGGGCTTAAAGAGCGCGCCCAGAG
AGCGGTGTTCACGGGCGACACTCTCTTCGTGGGGGGCGCCGGAAAATTCT
TCGAGGGGTCGCCGGCGGACATGCTGGCCTCTCTCAGCAAACTGGGTGCT
CTGCCGCCGGAGACGTTTGTGTACTGTGGTCACGAGTACACCCTGCAGAA
CTACGCCTTTGCGCGCTGGCTCGACCCTGACAACCCTGACCTGGCACAAT
CGGCGGCGGCAGCCCAAGCCCAGCGCGCAGAAGGACTGCCCACTGTCCCC
TCTACGATTGCCGTGGAACTGGCGACAAATCCTTTCATGCGCGCGTCTGC
ACTTCAGGAGAGGGTGGTCGCCCAGGCCGGCTCCGATCTGCGGGACCTCT
CCACCGCATCCGTCCTCGGCAAGATTCGGGAGATGAAAAACGAATTCAAG
TGAGTCGTCTGCATGTGGCTTAGGACGCTGCCTTCTTAAAAAAATGTCTA
CAACCAGAACCTGCTCGCC
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protein sequence of rna9350

>rna9350-protein ID=rna9350-protein|Name=rna9350|organism=Nannochloropsis gaditana|type=polypeptide|length=74bp
MAQVSPACHRSSPCNFCQSCFATKLFQGSSFRHRRDTITSQHENEDYLHR
FGALCNRPGLQSHFLRHTLNKTYT
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mRNA from alignment at KK037253.1:38910..39761+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9350 ID=rna9350|Name=rna9350|organism=Nannochloropsis gaditana|type=mRNA|length=852bp|location=Sequence derived from alignment at KK037253.1:38910..39761+ (Nannochloropsis gaditana)
ATGGCACAAGTgagtttttcctccttcgaaTCCGAAATTTGGAGCATTTC
TTCCTGACTGAGTACAGCTTGTGGTGCTTTCAGCAAAAATCTGATTCTTG
ATCACTCCTGCTACTTCTTCTTGGTAGAGCTGATAAGTCAGTATAACGCT
TATTTTTGGAGTTCCTGAAGCACTGGAATAAGACTAacatgggccggggg
cgatGACGGGAGGAGACTAGCTCACCGCCGACGCGGTCGAAACCCGAGGG
CGAGGCTACGGACAGGCGGACTCGCAAGCTTGCTTCGAGCTTGGGCGGAG
CAGCCTTTTTTCGAGTCTTTGCCACGTTCGATAAATATAGGAAGCGCATT
TTAAAAAATCACGTTGGTCGCGAGGCAGATCTAGGGAATTTTGTCCCCGG
GACAGCACACCCTCGCGACTCGCTTTGTTCTCGGTAGCAATTTATCCGGA
TCTAGTGTATGTCCTTAATTACAACACCTCACGACCTACACAGGTCCTGC
GTGCCAtcgttcctctccctgtaATTTTTGTCAGTCCTGTTTTGCTACAA
AGTTATTTCAGGGCAGCTCCTTCAGACATAGGCGGGATACGATAACATCA
CAACATGAGAATGAGGACTATCTTCACCGTTTTGGGGCTCTTTGCAACCG
CCCGGGCCTTCAGTCTCACTTCCTTCGTCACACCCTCAATAAGGTATGTT
TAAAATCCTGACGAAGAACTCTGCCAAAAATCCTGCAGTCGTCCCATGCT
GGAAGGATGCAACATTTATCTGTGCGACATGTGCGCACGGCCTGTGCTGT
CCCTGACTTGTCGtacttcttccttcctcctccaccgtagACTTACACAT
GA
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Coding sequence (CDS) from alignment at KK037253.1:38910..39761+

>rna9350 ID=rna9350|Name=rna9350|organism=Nannochloropsis gaditana|type=CDS|length=675bp|location=Sequence derived from alignment at KK037253.1:38910..39761+ (Nannochloropsis gaditana)
ATGGCACAAGTgaGTCCTGCGTGCCAtcgttcctctccctgtaATTTTTG
TCAGTCCTGTTTTGCTACAAAGTTATTTCAGGGCAGCTCCTTCAGACATA
GGCGGGATACGATAACATCACAACATGAGAATGAGGACTATCTTCACCGT
TTTGGGGCTCTTTGCAACCGCCCGGGCCTTCAGTCTCACTTCCTTCGTCA
CACCCTCAATAAGACTTACACATGAATGGCACAAGTgaGTCCTGCGTGCC
AtcgttcctctccctgtaATTTTTGTCAGTCCTGTTTTGCTACAAAGTTA
TTTCAGGGCAGCTCCTTCAGACATAGGCGGGATACGATAACATCACAACA
TGAGAATGAGGACTATCTTCACCGTTTTGGGGCTCTTTGCAACCGCCCGG
GCCTTCAGTCTCACTTCCTTCGTCACACCCTCAATAAGACTTACACATGA
ATGGCACAAGTgaGTCCTGCGTGCCAtcgttcctctccctgtaATTTTTG
TCAGTCCTGTTTTGCTACAAAGTTATTTCAGGGCAGCTCCTTCAGACATA
GGCGGGATACGATAACATCACAACATGAGAATGAGGACTATCTTCACCGT
TTTGGGGCTCTTTGCAACCGCCCGGGCCTTCAGTCTCACTTCCTTCGTCA
CACCCTCAATAAGACTTACACATGA
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Synonyms
Publications