rna9347, rna9347 (mRNA) Nannochloropsis gaditana

Overview
Namerna9347
Unique Namerna9347
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1426
Alignment locationKK037253.1:26373..27303 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100357g1.4704.mrna
Orig protein idgnl|cribi|Naga_100357g1.4704
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:26373..27303 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100357g1gene9064Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21360.1cds9317Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9347rna9347-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9347 ID=rna9347|Name=rna9347|organism=Nannochloropsis gaditana|type=mRNA|length=1426bp
CCGGCGAGCAGTATCTTCTGCTGTTGTTCGTATCATGAGGCTCCACGTTG
CTTGTCAGTCTTTGATGATGCTCGTCAATCACCCACTTATCGTCCTGTAA
GCTCGACACCTGACTTCTAATTTAATCTTTTACTATGTGCTTTCCCGCGC
AAAACATTTTCGTAGGATCGACCTTTCTCCCCCGCAGTCCATCGCACCTC
CCGTGCTTGGCCCTTTTCTGTTTCATCGACAAAACTTATTCCTTGAGTTT
TGAATAGGGATATTGTATATTCAGGAACCAAAATTACCGCTAGAGATGGC
GAATGCCTTGATTTTTGCAGCACGAGATGGGGATGTCACGGAGGTGCGAT
GGCGGCTCGAAGCCAAAGCTACTCTAGCTACCTACGCAGATAGTCACGGG
CAGACAGCCCTGATGTGGGCTGCGGTTCAGGGGCACACCGAGGTGGCGCG
CTGTCTATTGGATTTCGGGGCAGCTCTAGACGGAACGGAATGGGAAATGG
GGCGCACCGCCTTGTACATGGCAGCAGGGCGGGGCCACGTGACTTTCGTT
GAACTCCTCCTCTCGAGAGGGGCCAACCCTAGCCTACGCCGTACAGGCGG
GCGTACCCCATTGGGAATAGCGGCCTACAATGGGCATAATGAAGTGGTTA
AGTTGCTGCTGAGTCATGAGGGCTGCGATGTTGACGGTCGGGATGATCAG
GGGTGTACCCCTTTGTGGCAGGCGGCGCGCAACGGACGAACGCAGGCCTT
GCGCCTGCTCCTGGCCGCTGGGGCGGACCCTTCCATTCCCGGGGAACAGG
GATGGCAGGCTATCGACGTTGCACGGGAGAAGGACCGGGCGGAATGCATT
TCCTTGCTAGAAGGGGAAGAGCGGGCATACGTGCTTTCCAAAATCCGGCG
CCTATGGCGGGAGGAGCACCTGCAGGCAGGATTGGAGCGAGGCAGAGTCG
TGAGACGGGGGAAAGCCCCACCTTTTCTGGTGAATGGCATGTCGAAAGGT
GAGGGAGCTGCGAACAGCAACCTTGTGCTGCTGAGGGGGGGTGGTGCGGG
CTCGGCGAGGGGGTTGGTTCATGGAGAGGGAGGTAACGGTGGGGGCAATA
ATAAAGTCGGGAGCGACCGGGTGCGGGGAGATGGTGGCGCTGCTAGCTCG
TCACAAGAAGCGTGCCAAGGGCTCCCCCGGGTGGAGACGGAAGAAGACGA
TGAACACGGTCTTAAATCCCGCGCCCCGGACAGCGCCAAGGCGGCCGCCC
ACTACGTCGTCGAACAGATGCGATTTGACGTCTTCATCATCATGCGCGAC
CTGCTGGCCCTCTCCTCCACTTCCCTGTCAGCGCCATTTGGATAAGGTTG
CGGTGACCATTCATTGAGAATTGGTGTCTGAAGTTGTCGAAAAGAAAAGC
AAACTACGTCTTCGATTGACATACCG
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protein sequence of rna9347

>rna9347-protein ID=rna9347-protein|Name=rna9347|organism=Nannochloropsis gaditana|type=polypeptide|length=142bp
LLRQHPPRPPLEHPRLPLRLLLLRQHPPRPPLEHPRLPLRLFLLRQHPPR
PPLEHLRLLLRPLLPSIPRQSRMRLPRPQRMHLPSLCTHRRPTPSPTRRW
SERAADACDEATKQAILKCVRRGHLISWAQEVCFFDAIDLGE
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mRNA from alignment at KK037253.1:26373..27303-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9347 ID=rna9347|Name=rna9347|organism=Nannochloropsis gaditana|type=mRNA|length=931bp|location=Sequence derived from alignment at KK037253.1:26373..27303- (Nannochloropsis gaditana)
TCCTACTACGGCAGCACCCACCGCGGCCCCCACTGGAGCACCCACGCCTG
CCCCTACGCCTGCTCCTACTACGGCAGCACCCACCGCGGCCCCCACTGGA
GCACCCACGCCTGCCCCTACGCCTGTTCCTACTACGGCAGCACCCACCGC
GGCCCCCACTGGAGCACCTACGCCTGCTCCTACGCCCGCTTCTTCCGTCG
ATCCCCAGGCAGTCACGGATGCGCCTACCCCGGCCCCAACGGATGCACCT
ACCGAGTCTGTGTACACACCGCCGCCCTACACCAAGCCCGACGAGGAGAT
GGTCGGAAAGAGCGGCCGACGCTTGCGACGAGGCAACTAAACAAGCGATT
TTGAAATGTGTACGGCGTGGTCATTTGATATCATGGGCACAAGAAGTCTG
CTTTTTTGATGCAATCGATTTAGGAGAGTGAAGTGCTGCATAGAGTAAGC
AGAGTATGCGTAAGTCCAAAATAGCGAGCGTGATATGCGGGTTGAACGAG
AGAGACCAAAGCAATGAGAAAGGAGGGCAGAATCATGTGAGATTCGTGCC
TTTAGAATTTATCGAGATCGAATACACCGCTACTAGGAATGCAGTTGATT
GCCCAAGTGAAAGACACTGAAATGACCCGAAAGATGCTTCTGTCGGGATA
AAAGCGTCCGGAAGCGTGCTCGGAGTCTGCAATCTCTTAGTTTCCTTATT
TATCTTCCACAGTAAGGTACGAGTGAGGAGAGCAACTTCCTGGTGACGTC
GGCTGCGTGTTTGGGAAGACCTACTGGTTGTATTTTAAGCTACCATAAGA
GGGTAGCTGTGAAAGGAACTCAGTGGGGAAGTCAAACTTCAGGTCACTAA
AAGCAAAAAAATGAATTAAGGCTTCAAAAGAGAAAAGCTACTGCGATTCT
AATCTGCATTGCGCGGACCTTGTAAGCAACC
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Coding sequence (CDS) from alignment at KK037253.1:26373..27303-

>rna9347 ID=rna9347|Name=rna9347|organism=Nannochloropsis gaditana|type=CDS|length=429bp|location=Sequence derived from alignment at KK037253.1:26373..27303- (Nannochloropsis gaditana)
CTACTACGGCAGCACCCACCGCGGCCCCCACTGGAGCACCCACGCCTGCC
CCTACGCCTGCTCCTACTACGGCAGCACCCACCGCGGCCCCCACTGGAGC
ACCCACGCCTGCCCCTACGCCTGTTCCTACTACGGCAGCACCCACCGCGG
CCCCCACTGGAGCACCTACGCCTGCTCCTACGCCCGCTTCTTCCGTCGAT
CCCCAGGCAGTCACGGATGCGCCTACCCCGGCCCCAACGGATGCACCTAC
CGAGTCTGTGTACACACCGCCGCCCTACACCAAGCCCGACGAGGAGATGG
TCGGAAAGAGCGGCCGACGCTTGCGACGAGGCAACTAAACAAGCGATTTT
GAAATGTGTACGGCGTGGTCATTTGATATCATGGGCACAAGAAGTCTGCT
TTTTTGATGCAATCGATTTAGGAGAGTGA
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Synonyms
Publications