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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100357g6.4700.mrna |
| Orig protein id | gnl|cribi|Naga_100357g6.4700 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:13527..15222 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9343 ID=rna9343|Name=rna9343|organism=Nannochloropsis gaditana|type=mRNA|length=2579bp
ACTCGGCGCGTCCATAGTTCCAATGTCAGATTCCACGGCCATTTTTGACG
ACCGACACATAGAATGCCCATGATTTGATGCGTACGATGCGTGGGAGAAG
ACGTTGTTCAGTTGACGCTCCCAGAAAAAGAACTTGAGCCCACCTCGTCC
GAATAGCTGAGCACGTCATGCAGAAGAGAACGAGCGATACAGAGGTCCCT
AAAAACTGATTTTTTTCCAACACAGCGGTGCGAAAATTATGTCTACGCCA
CCAATGGTGGACTTAATTCAGGAAAGAAATCGCATCAAAATTGCACTTCG
GGAGGTCAGCACTGTTTGTACTGTCTGTAGGGACATCAAGACGGCCTGTT
CCGGTTATCCTTGCGCAAGGTACGTTGGTTTTCATCATGTTGATGAAGCG
CCCCCTCGGTTGAAGTATACGAATGCTTGACTTACAGCTCTTCTGCACTA
CACAGGTGTTGCCGGTTGTCGTTGCCTTGCCATCCACAGCCTCCTAAATC
ATCATCATCGTGTTCCAATAGAAAACGTTCTCGAAAGGTGTCAGAAGCAG
CTGCTGATGGTGCCCTGGGAGCCGCGGAGTCCGACGCGTCGCTCGCGTCG
GACTCCACAGGGAGTTCCGTGGAAGGAACAGAGCATGCGGAGTTTCGTCG
AAGTCCGAGGCGACAGCAGCTTCTGCGCCTGTCCTTGACAGAGTTGGCGC
TGGCGCGCCACAACCCTCAGCGTCTCAGCGCAGAATACGTCATGTGTTTC
TATAAAGTGCGGCGCGAGTTTGGGAGTGAGGGAATCGACCGACGGCGGGT
GATCGAGTGCATGCGTATCTGGCAGCATTTGAGCATCCTGGTCGGCGGCG
ACGTCACCTGGGGCATGGCGGACAAAGTGGGGAGGTCCATGGGCATCTCG
GCGGTGGACGTGGAGGACAACGCCTCGGTCGCCCTGGGGCCGACTCGAAG
TCGACGGAAGGGCCGGGCCCAGGAGGAGGTGGCGATCCTGGTGAGGCTGG
TGGACGAGGTGAGGACCATGCCGGACTACAAAATCCTGGCACGGACGCAG
CACGAGAGCGTGCCCACGTTTTTGGGTCTGCTGGCGGGGGAGCGGCTGGT
CCAGGTCACCAATGCGGCCTTCGACCGGATGGTGGAGGGCGCCGGGAGGA
TCATGAGCAGCGCCTTTGTGCACCGGACAACCTGCATCCTCCTCTTGGCG
CAGCTTGTGGCGCCGGATGACCGGAGCACCTTCTTCGAAGGCTTCATACA
GGCGCTTTTTGTGCCCAGCCGCTGCTTCAAATCCACTTTTCTCCTCAAAT
GGTTCCAGGGCGACGGAGACATCCGCCTCTGTATCGTCAGCTTCCGACCC
GTGAAGGTGGGACACCTATCCGGCGTCCAGATCCTCTTCGAGGCGGCTCC
CCAGAGCAAGCGGCTCACGTCTCGACCGCACCGGAACCAGGTCATCGACA
CCTTCCGAAGGCACGACACGCCCTCCCCCGGCCCCTCCCCCTCCGCCGCG
TCCTCTTCTTCCTCCATTTCTCTTCATTCCGAGTCGGGCGCGCGTCCGAG
ACCAAAGCCACGCGTGCCCTCGGAGCCTGGCCTGGAAAACCGCCGCTTCG
GGTGCTCTCCCGACGCCTGGTGGCAGCTGTCGGTGCCCGGGGACCCTGCG
TCCATGCCAAACACCTCGGCTGCCAGACGATCTCTCGAAATCGAGCGGGA
GGGGGGCGAGGGAAGGGCGGGGAGGGGAAGCTTCTGCATACCGGCACTTG
CCTGTCTCCCTGAGCCGTGCCCGCCGAGGTCGGAGGCTGCTGTCAGGCCT
GAAGGAGGGACAAAGGTGGGAAAGGGAGACGAGACGCTCCTGCCAAGGCC
ACTGGGACGGGGCGTTCCGGTTTTGATCCCTACCAAGGAGGGCGGGGGGC
AGGCGGAGGGGGAGGGAGGGCAGGCACGGGCGTCGGAGGGCTTCGCGGAA
GGGAAGATGAAGGAGGGCAGGCACGACAGCAGTGCCATGAGCACCAGCTC
GACCACCAGCCTCGGTGACGTCTGTGACGGAGGTGCGGAAGCCAGCGCGG
GGTTCTTGGGAGTTCCGGATCCTCTGGCCGACGAGGCGGAAGACAACCTA
CTGGACGCAGCCTTGGCCAGTGCGATCGGGCCCACGCTGACGCCGGAGCT
GTTGAATGAGGTCTTTGACTGAGCGTCAAGACAAGGCGGTCGGTCGTTGA
TGAGGGTGGATGTAGTGGATTTTAGGACGGCTAGGGCCTTCTCGGTAGGG
AAATAGGGGTCTCGAAACTGTCTCAACGAGAGGAGAAACGCCGGCAAGGA
GGGGGAATATATATGTATCTCAGCCAGGTACATCGGTGTGATTGTATGTT
GCTGCCAACTTGGATAAGGGCGATCCGTTGTAATTGAATCAAGGCCAACG
ACAGTGGCTCTTTTTTTCGTGTGAATTTTGTGTATCGTAACCAATGCCCG
ACAATGTAGTGAATGATGACTATCGTAGGGCTCTGCTTTTGACAAGCGGG
GATGTAGCGAGGAGAGTGTACCTCCCTCTAGCATCCGCCTCTGACACAAT
TAATCATCTGATTAAACATGTAAATGATT back to topprotein sequence of rna9343 >rna9343-protein ID=rna9343-protein|Name=rna9343|organism=Nannochloropsis gaditana|type=polypeptide|length=524bp
MREGGEDGGGGGPEARAMEGRGRAEISAAGGRTRVVVVEEEEEEEEEEVS
AQAPAASFPPRLDLSFLPLSHAAATSLAGALPFLEGLRLRSCSLSQFPAP
VLPPTSPRLQEVDLSYNPFLPSPSLAPLLTDLLRLPSLLRLGLDGCPSCL
GPALALALASRSSAGIPPLARLSLCDNAWSPAIWAQVLPQACAQSLRLHD
LVLGEGRSGGDEGRGGEGGAEEGKEGLVGPEGGEEDVLDALFADVGGEER
RELALSFPSSRPKPSLQPLLRALARPCGLLTHLDLSSSSLPYLSTDDVTQ
LFAALCHNTKLQSLDLSHAATFAPAPVVEPALRLLARALHSNPHARLRVL
RLRGCRLGLRGLATLLAALPPVAPTEGARGSGALLSLLDLADNRDLGVVS
AGCGGHDEAALFSLSQTLPQSFPPRGSQAWIAPGGRLDLSGNGLLGVMDE
LGWRSYGQLRRRMEMGRIDEDRVVFVNHGTKDDCEEGGREMTPSSPELGS
ARCFAADADSQWGEKTICETGTSH back to topmRNA from alignment at KK037253.1:13527..15222+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9343 ID=rna9343|Name=rna9343|organism=Nannochloropsis gaditana|type=mRNA|length=1696bp|location=Sequence derived from alignment at KK037253.1:13527..15222+ (Nannochloropsis gaditana)
atgagggagggaggggaggacggggggggaggggggccggaggcgagggc
catggaaggaagggggagagccGAGATCTCcgcggcaggagggaggactc
gcgtggtggtggtggaggaggaggaggaggaggaggaggaggaggtctcG
GCCCAGGCGCCCgcagcctctttccccccccgcctggatttgagcttcct
ccccctctcccacgccgccGCGACCTCCCTCGCCGGCGCCCTGCCCTTCC
TAGAGGGGCTCCGGctccgctcctgctccctctcccagttTCCCGCGCCC
GTTCTCCCACCCACGTCACCGCGCCTCCAGGAGGTGGACTTGAGCTacaa
ccccttccttccctccccctccctcgcccccctcttgaccgacctcctcc
gcctcccctcgctcctccggcTGGGTCTGGATGGCTGCCCTTCCTGCCTG
GGACCCGCCCTGGCTCTCGCCTTGGCAAGTCGAAGCTCTGCGGGAATCCC
CCCGCTCGCGCGCCTCAGCCTCTGCGACAACGCGTGGTCGCCTGCGATCT
GGGCCCAAGTGCTTCCACAAGCGTGCGCCCagtccctccgcctgcaCGAC
CTGGTGCTCGGGGAGGGCCGgtcgggcggggacgaagggagaggagggga
agggggtgccgaggaggggaaggagggtctggtggggcctgagggagggg
aggaggacgtgttggacgccctcttcgccgacgtgggcggggaggaaagg
cgggagcTAGCCCTCTCgttcccatcctcccggccgaagccctccctcca
gcccctcctccgggcCCTGGCCCGTCCCTGCGGCCTGCTCACTCACCTGG
ATctgagcagcagcagtctcCCCTACCTCTCCACCGACGACGTGACCCAG
CTCTTCGCTGCCCTCTGCCACAACACCAAGCTTCAGAGCCTGGATCTCTC
CCACGCCGCCAccttcgcccccgcccccgtggtcgagcccgccctccgcc
tcttaGCCCGGGCCCTCCACTCCAACCCCCACGCCCGGTTGCGGGTCTTG
CGGCTGCGAGGGTGCCGTTTGGGCCTCAGGGGGCTGGCCACACTCCTAGC
GGCCTTACCCCCTGTCGCCCCCACGGAGGGCGCAAGGGGGTCGGGCGCCT
TACTCTCCCTGCTGGACTTGGCGGACAACAGGGACCTGGGCGTCGTCAGC
GCGGGATGCGGGGGGCACGACGAAGCAGCTCTCTTCAGCCTGAGTCAGAC
CCTGCCGcaatctttccctccccgtggaTCGCAGGCGTGGATCGCTCCGG
GCGGGCGGCTCGACCTCTCAGGCAACGGGTTGCTCGGCGTTATGGATGAG
CTGGGCTGGCGGAGCTACGGGCAATTGAGGCGTCGGATGGAAATGGGCCG
TATCGACGAGGATCGTGTGGTGTTCGTGAATCATGGCACGAAGGATGATt
gcgaagagggagggagggagatgacgCCATCAAGCCCAGAGCTTGGCAGC
GCTCGATGTTTCGCAGCTGATGCCGATTCCCAGTGGGGAGAAAAAACGAT
TTGTGAGACTGGCACCTCACATTGATGAACTTAGAGGGGGATGTAAAGAT
GCTCAAAAATTGATGAAAAATCTTGGAAATAGAAGTGACCATGCATATCA
TGAAATTAGCACCTTGATTAGTGGAAAAGAAATCAGATTTTGTAGC back to topCoding sequence (CDS) from alignment at KK037253.1:13527..15222+ >rna9343 ID=rna9343|Name=rna9343|organism=Nannochloropsis gaditana|type=CDS|length=1575bp|location=Sequence derived from alignment at KK037253.1:13527..15222+ (Nannochloropsis gaditana)
atgagggagggaggggaggacggggggggaggggggccggaggcgagggc
catggaaggaagggggagagccGAGATCTCcgcggcaggagggaggactc
gcgtggtggtggtggaggaggaggaggaggaggaggaggaggaggtctcG
GCCCAGGCGCCCgcagcctctttccccccccgcctggatttgagcttcct
ccccctctcccacgccgccGCGACCTCCCTCGCCGGCGCCCTGCCCTTCC
TAGAGGGGCTCCGGctccgctcctgctccctctcccagttTCCCGCGCCC
GTTCTCCCACCCACGTCACCGCGCCTCCAGGAGGTGGACTTGAGCTacaa
ccccttccttccctccccctccctcgcccccctcttgaccgacctcctcc
gcctcccctcgctcctccggcTGGGTCTGGATGGCTGCCCTTCCTGCCTG
GGACCCGCCCTGGCTCTCGCCTTGGCAAGTCGAAGCTCTGCGGGAATCCC
CCCGCTCGCGCGCCTCAGCCTCTGCGACAACGCGTGGTCGCCTGCGATCT
GGGCCCAAGTGCTTCCACAAGCGTGCGCCCagtccctccgcctgcaCGAC
CTGGTGCTCGGGGAGGGCCGgtcgggcggggacgaagggagaggagggga
agggggtgccgaggaggggaaggagggtctggtggggcctgagggagggg
aggaggacgtgttggacgccctcttcgccgacgtgggcggggaggaaagg
cgggagcTAGCCCTCTCgttcccatcctcccggccgaagccctccctcca
gcccctcctccgggcCCTGGCCCGTCCCTGCGGCCTGCTCACTCACCTGG
ATctgagcagcagcagtctcCCCTACCTCTCCACCGACGACGTGACCCAG
CTCTTCGCTGCCCTCTGCCACAACACCAAGCTTCAGAGCCTGGATCTCTC
CCACGCCGCCAccttcgcccccgcccccgtggtcgagcccgccctccgcc
tcttaGCCCGGGCCCTCCACTCCAACCCCCACGCCCGGTTGCGGGTCTTG
CGGCTGCGAGGGTGCCGTTTGGGCCTCAGGGGGCTGGCCACACTCCTAGC
GGCCTTACCCCCTGTCGCCCCCACGGAGGGCGCAAGGGGGTCGGGCGCCT
TACTCTCCCTGCTGGACTTGGCGGACAACAGGGACCTGGGCGTCGTCAGC
GCGGGATGCGGGGGGCACGACGAAGCAGCTCTCTTCAGCCTGAGTCAGAC
CCTGCCGcaatctttccctccccgtggaTCGCAGGCGTGGATCGCTCCGG
GCGGGCGGCTCGACCTCTCAGGCAACGGGTTGCTCGGCGTTATGGATGAG
CTGGGCTGGCGGAGCTACGGGCAATTGAGGCGTCGGATGGAAATGGGCCG
TATCGACGAGGATCGTGTGGTGTTCGTGAATCATGGCACGAAGGATGATt
gcgaagagggagggagggagatgacgCCATCAAGCCCAGAGCTTGGCAGC
GCTCGATGTTTCGCAGCTGATGCCGATTCCCAGTGGGGAGAAAAAACGAT
TTGTGAGACTGGCACCTCACATTGA back to top
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