rna9341, rna9341 (mRNA) Nannochloropsis gaditana

Overview
Namerna9341
Unique Namerna9341
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1457
Alignment locationKK037253.1:6244..7462 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100666g1.10299.mrna
Orig protein idgnl|cribi|Naga_100666g1.10299
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:6244..7462 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100666g1gene9058Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9341rna9341-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21362.1cds9311Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9341 ID=rna9341|Name=rna9341|organism=Nannochloropsis gaditana|type=mRNA|length=1457bp
ACGCAACTGATGAAGACAGGGCATTAATCTGTTCCTATGCCATTGTATGC
CTACATGCTCGCGCCGCTTGGGCACGTCTTGAGTGGATTAGGGTTGGGAC
TGCACGTTTTTCCTACCTCACAGTGTCCTTTTTAGCATCAGCAGGAAAGA
CGGCGCGTTTCACGTGCACGGGCTGAACCCAGCCACACCCATTCTTTTTG
CGGATGTGAATCATCCCGACACCACACAAAAGGGGACAATCAACGATGTT
CGGCCATGCTATTGTTCACATAAATCAGGGAAGTTGAGGACGGATGTCTT
TCTATTATCAACATGAAAAGTGATGGCGTCATCATCCTTCTCTCCCCCCT
CCCCGCCCGGAAAATGATCACATTGCATCGTCCAGGAACAAAGTGCAAAA
GGTGGTCATCATGACGTGCGTGTATGGGATCCTCTGTTTGTGCGATGGTA
TGCTCGATGTAAGTCGATTCCTTCTTTGTCAGGCTTTTATCGCAGGAAAT
ACTTGGCTCCGAGGCCCCTCTCGCATGGCGTTCAGAGGATACGACACGAT
GCTGGCTGGCCCGCATTGTGCGTGAGAAAGAAAGCACAAAATGACGCAGC
TAAACCACCACAACACACAAACAGCAAAAAGGATAATGGGAACGCAGCCC
ATGGACCCGGGCCACCCCAAGAAAGTGCTCTGCAGTGGTGGCCTCCCTCC
ACCCTTTAGTGCATGTAAATGGACGCTTGAAGAGCTTCTCGTAAAACAAA
GAGAGCCAATTTCCTCCTCCGCCTCCTCGTGCACCTCGAGAGCACTCCTC
CTCACACTGGAATTCGCCGACAAGCGGAGCATGACGCACATGTTGGGCCG
CATCAGCGCTTTCAGTGAGGGGAAAGCGAACAAAGGTCTCAAAAGTGAGG
CCAAGGCGGGCGACGCCAGCCGCGGTTATTACGGGCATAATTTCCCCTTG
ACAGTGCTGGAGGATTTCTCCCAGATCCAGGGGGCGAGCGGTGGGAAGAA
CGGGGCGCGAAAGGGAGGGGAGGAGGGCGGTCTGGCCCGGGGCGAGCAGG
ATCTGGTCGACTTATGCCAAAAGCTGGGTTTGATGAAGAAAACAAAGGGT
GACGGGCCCAGAGGAAGCAAGGGGCACGGCGCGCTGGGAGGGAAGGGCGG
ACAAGCATCTTCTTCCTACCTGATCGCGCATCTAAAGCACGACCTCGGCA
CCCGGCAGCACGAGCTTTGTCATGCCCGTTACTTTTTAGACCCGACCTAC
CGCCAGGCCTGCCTAACGGCTTGGGAAGCTCTCTCCGAAAAACACCGAGA
CTACCTGTCGGCGTTTTTGTCCCGGCTGGGTTACCACGAGGCGGTGCACG
CGGACGAGTTCCAGGCTTTTGCCTTGACGGAAAAAGCGAATTTTTGGGGG
GTGCGCATTGATGTGGCGTGGCCCGATGTGATTGGAGGGGGGGAGGGGAG
GAAGTGA
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protein sequence of rna9341

>rna9341-protein ID=rna9341-protein|Name=rna9341|organism=Nannochloropsis gaditana|type=polypeptide|length=126bp
MKNIQRCLSIAVLYCMVLISPTLAFLPPLSTASSKFRVASSHRAPRTTSL
KAASFSDVCVSVAAAADEYEYGAVAAPGWVLPVGALLTLGLAVAIPLALR
PGTEAFEEERDRLEEMRRQRGQSEEE
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mRNA from alignment at KK037253.1:6244..7462-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9341 ID=rna9341|Name=rna9341|organism=Nannochloropsis gaditana|type=mRNA|length=1219bp|location=Sequence derived from alignment at KK037253.1:6244..7462- (Nannochloropsis gaditana)
CGACCAGGCAGTGAAGACACCTCGCATGACTAACCCTAGTGGCCGTCGGG
CATAAAAAGTCACCACGTGACACCGCAAGATCGACACGTGTTACCATCTA
CGCGCGCTTTCATATTAATTTCTCACTGACATGAATATCTTTGCGGGAAT
CCAACAGAGCGTGTCCGAACCCGACATCTGCAATCAAGGAACTGCAACTC
GCCGTCCCCGAGACCATGAAAAACATCCAACGTTGCCTTTCTATTGCCGT
GCTTTATTGCATGGTACTGATCAGCCCCACGCTGGCATTTTTGCCGCCGT
TGTCCACTGCCTCGAGCAAGTTTCGTGTGGCTAGCAGCCATCGAGCCCCT
CGCAGTAAGTCCTCAAGGTTTCGCTCCCCCTCTCGCTGCAACGTTTTCAC
GTTTTGACAGCATCACTCACGTCTCCAATCCTACGTCAAACTACTCAGCA
ACTTCCTTAAAAGCTGCCTCTTTCTCCGATGTTTGCGTTTCGGTGGCCGC
GGCGGCTGATGAGTATGAGTACGGCGCCGTCGCCGCCCCTGGTAGGTGTG
AAAGAGCTTTCCTTCCTCGTCCTCCCGTTGCCTCACACTCCTCCCTCCTT
TCCGACGTACTGCACAGGATGGGTGCTTCCTGTGGGTGCGCTTTTGACGC
TAGGTTTAGCGGTAAGTACCTCTGTTTCAAAGCACGGGGTATCCCTTCCT
TCCCCCTGAAATGCCTTTGGAGCTGTCCTTGAGGCGGCTAGAAGGCTGAT
GCCCGATGCACGAATAAGTCATGGATGCTACGGTACGCGAGATGTGCGGC
TCCAGGAACCCCCGAGACGCTCATACCCCTCTCTCTGTGGCAGGTGGCCA
TCCCCCTCGCCCTCCGACCAGGGACGGAGGCCTTCGAAGAGGAGCGGGAT
CGCTTGGAGGAGATGCGGCGACAGCGGGGGCAGAGCGAGGAGGAGTGAGG
GAGGGACGGAGGGAGGGAGGGAGGGGGCAGAGCGAGGAGGAGTAAGCCTG
TCGAGGAGGGAGGGGAGGAGGGGATGGCTTGCGAGGAGGAGGGGGAAGGA
AGAGGGGAGGAGGGGAGGAGGGGAGGGGCGAAGGGAGGGAGCCCGAGAAG
GAGAAAGAGAAAGCTTCACTTTTAAAACAAGAACAGATAAACAGCGTGCA
TGCTCCGACAAGAATAATTGAAGAGCGTGCCATGAATAAAAAGTGTGCCA
TGAATGGAGGAGTGGCGGG
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Coding sequence (CDS) from alignment at KK037253.1:6244..7462-

>rna9341 ID=rna9341|Name=rna9341|organism=Nannochloropsis gaditana|type=CDS|length=1524bp|location=Sequence derived from alignment at KK037253.1:6244..7462- (Nannochloropsis gaditana)
GTGGCCATCCCCCTCGCCCTCCGACCAGGGACGGAGGCCTTCGAAGAGGA
GCGGGATCGCTTGGAGGAGATGCGGCGACAGCGGGGGCAGAGCGAGGAGG
AGTGAGATGGGTGCTTCCTGTGGGTGCGCTTTTGACGCTAGGTTTAGCGC
AACTTCCTTAAAAGCTGCCTCTTTCTCCGATGTTTGCGTTTCGGTGGCCG
CGGCGGCTGATGAGTATGAGTACGGCGCCGTCGCCGCCCCTGATGAAAAA
CATCCAACGTTGCCTTTCTATTGCCGTGCTTTATTGCATGGTACTGATCA
GCCCCACGCTGGCATTTTTGCCGCCGTTGTCCACTGCCTCGAGCAAGTTT
CGTGTGGCTAGCAGCCATCGAGCCCCTCGCAGTGGCCATCCCCCTCGCCC
TCCGACCAGGGACGGAGGCCTTCGAAGAGGAGCGGGATCGCTTGGAGGAG
ATGCGGCGACAGCGGGGGCAGAGCGAGGAGGAGTGAGATGGGTGCTTCCT
GTGGGTGCGCTTTTGACGCTAGGTTTAGCGCAACTTCCTTAAAAGCTGCC
TCTTTCTCCGATGTTTGCGTTTCGGTGGCCGCGGCGGCTGATGAGTATGA
GTACGGCGCCGTCGCCGCCCCTGATGAAAAACATCCAACGTTGCCTTTCT
ATTGCCGTGCTTTATTGCATGGTACTGATCAGCCCCACGCTGGCATTTTT
GCCGCCGTTGTCCACTGCCTCGAGCAAGTTTCGTGTGGCTAGCAGCCATC
GAGCCCCTCGCAGTGGCCATCCCCCTCGCCCTCCGACCAGGGACGGAGGC
CTTCGAAGAGGAGCGGGATCGCTTGGAGGAGATGCGGCGACAGCGGGGGC
AGAGCGAGGAGGAGTGAGATGGGTGCTTCCTGTGGGTGCGCTTTTGACGC
TAGGTTTAGCGCAACTTCCTTAAAAGCTGCCTCTTTCTCCGATGTTTGCG
TTTCGGTGGCCGCGGCGGCTGATGAGTATGAGTACGGCGCCGTCGCCGCC
CCTGATGAAAAACATCCAACGTTGCCTTTCTATTGCCGTGCTTTATTGCA
TGGTACTGATCAGCCCCACGCTGGCATTTTTGCCGCCGTTGTCCACTGCC
TCGAGCAAGTTTCGTGTGGCTAGCAGCCATCGAGCCCCTCGCAGTGGCCA
TCCCCCTCGCCCTCCGACCAGGGACGGAGGCCTTCGAAGAGGAGCGGGAT
CGCTTGGAGGAGATGCGGCGACAGCGGGGGCAGAGCGAGGAGGAGTGAGA
TGGGTGCTTCCTGTGGGTGCGCTTTTGACGCTAGGTTTAGCGCAACTTCC
TTAAAAGCTGCCTCTTTCTCCGATGTTTGCGTTTCGGTGGCCGCGGCGGC
TGATGAGTATGAGTACGGCGCCGTCGCCGCCCCTGATGAAAAACATCCAA
CGTTGCCTTTCTATTGCCGTGCTTTATTGCATGGTACTGATCAGCCCCAC
GCTGGCATTTTTGCCGCCGTTGTCCACTGCCTCGAGCAAGTTTCGTGTGG
CTAGCAGCCATCGAGCCCCTCGCA
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Synonyms
Publications