rna9336, rna9336 (mRNA) Nannochloropsis gaditana

Overview
Namerna9336
Unique Namerna9336
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length727
Alignment locationKK037252.1:425016..426072 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101318g1.8291.mrna
Orig protein idgnl|cribi|Naga_101318g1.8291
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:425016..426072 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101318g1gene9052Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21367.1cds9306Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9336rna9336-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9336 ID=rna9336|Name=rna9336|organism=Nannochloropsis gaditana|type=mRNA|length=727bp
TTCTGTGCCCGATTCGATGCTTCCTCTCAGTCGTTTTTACGCGTCATTTC
CTGGTCTCTTTTCCATTTCTCCTCAGTCCTTCTCGACCTTAATGGTGCTG
CTTACTTACCTGTTCTGCATCTTTCCCTCCCTCCCTCCCTCCCTCCTTCC
CTCCCTCCCTCGCCCCTTTCCTCTTCCCCTCCTCCCTTCCAGGACAACCG
CGTCACGGTGGTGCTCCGTTTCATCAACCGATCTTCCTACCTCGCACTCT
GCAAGGACGTCACACGCCGCCAGCGGCGTGTGAAACGAAGGCGCGAGGGA
GTGCGGGAAGGAGGGCACGAGGGAGGGCGGGAGGGTGGGCGGGAAGGAGG
GCGAGAGGCTGGGACGAAGAAGGCGAAGGAATGAGACGATTTGAAAGGAG
AGCGTCGAGCTGACATGGCGAGGGAGCATGTGAGACACGTTCTGTGGCCT
TACCCAGCTTTGGTGGGGCTGAAAAAGAGCTATGGCGTGGTTTTGTATCT
ATCGAATGTCCCGGCTGGCAGGACGAATGCATCCGAAGGGGGGGGTTCGG
GACGGGCCCGTGGATAGTGCCAAGGGATGCGAACAACTAAAGTATTGTAA
TGGCAAATAATGGTGTCCCAAAACAAGCCACTGGGCGAGGAGTCTCGGCG
TGTCGACCGACTTGAACGGTGCGATAGGGCTAAGAAAGAAGTAATTAAAC
CTCTTTGTTTTAATGTGGTCATTTTGC
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protein sequence of rna9336

>rna9336-protein ID=rna9336-protein|Name=rna9336|organism=Nannochloropsis gaditana|type=polypeptide|length=190bp
MLQVCAHTKAPARTGIQRFFVVALFLCGHKPSRPLFLQHYDHLLRFKATT
FPTALLFTPDVSMSTRTGDGMVNAAGSVLTAVVGLARSPQPRGGDGDKGA
WPMTSPAANTDNVPSPCAVTGKKESSLGMAATAEGKGIGAVVEAAEVRGG
EGGREGGRSPACINLRSDAMGLNDEVSRTFNGSGRESGQE
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mRNA from alignment at KK037252.1:425016..426072-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9336 ID=rna9336|Name=rna9336|organism=Nannochloropsis gaditana|type=mRNA|length=1057bp|location=Sequence derived from alignment at KK037252.1:425016..426072- (Nannochloropsis gaditana)
TCTCTATCTACATCATACATACGACCCGATTACTACGCCCTTCCCAAGGA
CCTGGATCACTGCAGGAAAAAGCATCGCGCACATTGTTCTCGTATTGCAA
CAATCTTCACACATGGAACCCCACTGGTTCTTCTGACGGTCCAAATACCA
GGCTTTATGTGACAGGAAATGGCCTTGTAAGACCCGGTATGCCTGCCCCC
GGAGGTCGCGACGGGTATGAGCAAGAGACAGGGCACAAAGTGCACCTAAA
TTCCTCTTTTTTTTCATCCCGCTTACTATTCCTGGAAGCCTTCACTCATC
TGCTAACGTAATGACTGAAAATGTGCCTGTTTGTTTTCGTCTGTGCGAAT
TTGTGAGTCAAAACCGACCTGGGAGCAGGGCGGGCTCTGGGAGAGTCCTC
TTCCCTCGGAGACAAGGTTGTACCCTACACACCACAAGATGAGGCACGAA
CGTAGAGGGAGCGCTTCGAATTGTTCCATAGGTTATGCTTCAAGTGTGTG
CACATACTAAAGCGCCGGCGCGGACGGGAATACAACGTTTTTTTGTGGTT
GCTTTGTTCCTGTGTGGGCACAAGCCTTCTCGGCCCCTGTTTCTCCAACA
CTACGACCACCTGCTGCGCTTCAAGGCCACAACTTTTCCGACCGCGCTGC
TCTTCACTCCTGACGTTTCCATGTCCACACGCACAGGCGATGGTATGGTG
AATGCGGCAGGCTCAGTGCTGACCGCGGTTGTGGGCCTCGCGAGGTCGCC
GCAACCCAGAGGAGGCGATGGCGACAAAGGGGCCTGGCCGATGACTTCAC
CGGCCGCAAACACGGACAACGTCCCAAGCCCTTGCGCCGTGACTGGGAAG
AAGGAAAGTTCCCTGGGCATGGCGGCTACAGCGGAAGGGAAGGGCATTGG
TGCGGTGGTGGAGGCGGCAGAGGTGAGGGGGGGAGAGGGAGGGAGGGAGG
GAGGGAGAAGTCCTGCATGTATCAACTTACGGAGCGACGCGATGGGGCTC
AACGATGAAGTGTCTCGAACTTTTAATGGAAGTGGGAGGGAAAGTGGTCA
AGAATGA
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Coding sequence (CDS) from alignment at KK037252.1:425016..426072-

>rna9336 ID=rna9336|Name=rna9336|organism=Nannochloropsis gaditana|type=CDS|length=573bp|location=Sequence derived from alignment at KK037252.1:425016..426072- (Nannochloropsis gaditana)
ATGCTTCAAGTGTGTGCACATACTAAAGCGCCGGCGCGGACGGGAATACA
ACGTTTTTTTGTGGTTGCTTTGTTCCTGTGTGGGCACAAGCCTTCTCGGC
CCCTGTTTCTCCAACACTACGACCACCTGCTGCGCTTCAAGGCCACAACT
TTTCCGACCGCGCTGCTCTTCACTCCTGACGTTTCCATGTCCACACGCAC
AGGCGATGGTATGGTGAATGCGGCAGGCTCAGTGCTGACCGCGGTTGTGG
GCCTCGCGAGGTCGCCGCAACCCAGAGGAGGCGATGGCGACAAAGGGGCC
TGGCCGATGACTTCACCGGCCGCAAACACGGACAACGTCCCAAGCCCTTG
CGCCGTGACTGGGAAGAAGGAAAGTTCCCTGGGCATGGCGGCTACAGCGG
AAGGGAAGGGCATTGGTGCGGTGGTGGAGGCGGCAGAGGTGAGGGGGGGA
GAGGGAGGGAGGGAGGGAGGGAGAAGTCCTGCATGTATCAACTTACGGAG
CGACGCGATGGGGCTCAACGATGAAGTGTCTCGAACTTTTAATGGAAGTG
GGAGGGAAAGTGGTCAAGAATGA
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Synonyms
Publications