rna9335, rna9335 (mRNA) Nannochloropsis gaditana

Overview
Namerna9335
Unique Namerna9335
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2300
Alignment locationKK037252.1:422617..423343 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101155g6.443.mrna
Orig protein idgnl|cribi|Naga_101155g6.443
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:422617..423343 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101155g6gene9051Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21368.1cds9305Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9335rna9335-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9335 ID=rna9335|Name=rna9335|organism=Nannochloropsis gaditana|type=mRNA|length=2300bp
CCTCGGCCATTCTCGGACTTTTTCCCGGGGGGCGCATGCGGGGGCCCTTG
ACCTCCTCCGGCGGATGCTCGTCTTCAATCCGGACAAGCGCGTCACCGTC
GACGAGGCGCTTCAGCACCCGTACTTGGCAAAGATTCGGGATCCCCGGTT
GGAGATCAGCATGGCGACGCCCTTGAGGGACGGAATCACGACCGGGTGGG
GCATTGCCGAGCTGAAAAGGGCCCTGTACTCGGAGGTGTGCGATGTGATC
GAGGCAGGCAGGGAGGGAGGGAGGGAGGGCAGGCACTGAGGGAAGGAAGG
AAGGGGGAGGATGGTGGGTGGAGTGGAAGGAGGGCGGGGGGGAGGACGGG
GGGAAGGGAGGGGGAGAGGGTACGTCATATGGACACGAAAGGGAAATGAA
GAAATATAGGGAAGGAGGAAGAGAGAAAGGAAAAGGCAGTGCCCATTCGA
AAGGGCTGGAAAGGGAGGAGTTTTGTGGAAAGGAAGGATCGATGGCAGGA
TTTGAGTGGAAGAGATCGGTGGCCGGGAGAAGAGGAGGGGGAGCGGACTA
TGCGGCCTCCTAGTGCCCCCGCAGAGTCTGCCTTAAGTAGAGGAGGAAAT
AGCGATAATCTAGACATAACCATCGATTATCCAGCCCGCTTAGCGAAGGA
GTCCAGCAGTAGCAATAGCAAGACAGTACGTATCGGTAACACATAGAAAA
CTAGATTCATGAGACCTGGGGTCGAGGAAGCTTCTCCGGGGCGCCCGCTC
CAGGCACGCCTGAAGCGGGCGGAAACGGCCAAAAACGCAAGTGTAGGCGT
TTTTTTTGAATGGAGGGAAAAAAGGACCGGTCGGGGCGGGCCAGGGGTCG
GAAAATGACCGAAAAAAGCCGGCATGCGCCGGCGGGGGCGGGGGCGAGTG
GGACCTTTAGCCTGAGGGAACCAGGGAGTGCGTGTGGGACAGGTTGACCG
CAGCCCTGTCGCTGGTTGCTGGCTCTCTGACACCCGTGCTTCGTGGCCGT
GTGCCCCAGGGAGGGCTGCAACCGGGTCCTGTGGGCTCAAACGCCCGGCG
CGGGTTCTAAACAGAAGGAGACGAAGTACATGCCATTTTTAAAATCGTAG
TTTTAGATATCGACATTCTAGAAGAGGGACAAGACCGATGTGCGTGGTCA
GGGGCGGGCCCGTAATTTTGCATGGTAGTGTACCAAGAATAAGAGGGGAG
GTCATGGGGAAAACGACGGGGCGAAGAGATATAGGGAGACTGTGACGCGA
TTAGAAGTCAAAGATGTGTGCAACAGGTATAGATTACATTTTTGGTCTGC
GACGAAGACGGGCTTCGTCGCGTCGAACCGGACTGAGAGGGAGCGGGATC
GAATGCATTGAATTGAGAGTGATTTGAAATGATATGAAGTAGGGTGTCAG
AGGGTCTTCGTTCGTGACGTGGATCGAATAGTTTTAGGTAGGAATCATAG
ATGAACCCGGATCGACGCTCCGCCCCTGCGTCCTTGCTGTGATAGAGCTA
GCTACAGAACTTTGGGTACTAGGGAAGAGAAAGGAGGAATGCGTAGTCAC
GACAATTCGCCGTAAAGCGTCTAACCTCCGTAGAAAAAGACTGCACGGTG
AGGAGGATCGGAATATAAACATACGCCCGCGCCAAGACCATCTCCTGGAT
CATGGCGCTGCCTCCCAGAAAAGAGATCACCGAGCCACGGTCAACCAGTG
CTTATGTGCGCTGGGAAAATGAAGGTCAATCTCATGCAGGGGGGAATAAG
GAAAGATCTGGGAGGGAGACGTGCTACGGTCGGGCGCCCGAGGCAACTGT
CGGATGACATCCGGGTCGGTTTTTTGCGCCTGGTTGAACCTGTTTTAGGC
GGGGGAGACGGGACGGATGATCGTTGTTGTGGCTCGACGGGCCAGGAGAG
GAAAGGAGCAGGCGGGCGGGTGGTGCAAGGGAATGGATGGGAGCGTGATA
GACGAAATGAAATGAAACGAGGGAAGGGCAGGTTTTCGCAGCTAGAATAC
TTTCGCAGCTAGAATAGCAATAGGATTGCGGTCGAAGATGTGAGTTTGAG
ATGGTCTTATCAGCACGTGACCGATAAAAACGACGCTAAACGGCAGACCC
TTGACGTCAGTAATGCCTACATACATACCTACACACACGCCATGGACGGC
GGTCCTCTCGCTGTTTCTTACTTGTTCCCTTTCTTTCCGGCTTTCCACCA
ACGAAGTTTGCAGACGTACGACATCAAAGTGTGGAGTGAGTTTTAAGGCA
TGTCCTAGTAAGCGCCATCGACTCGCGCGTTCTGACAAGGCTCTGTTCTC
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protein sequence of rna9335

>rna9335-protein ID=rna9335-protein|Name=rna9335|organism=Nannochloropsis gaditana|type=polypeptide|length=127bp
FCARFDASSQSFLRVISWSLFHFSSVLLDLNGAAYLPVLHLSLPPSLPPS
LPPSPLSSSPPPFQDNRVTVVLRFINRSSYLALCKDVTRRQRRVKRRREG
VREGGHEGGREGGREGGREAGTKKAKE
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mRNA from alignment at KK037252.1:422617..423343-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9335 ID=rna9335|Name=rna9335|organism=Nannochloropsis gaditana|type=mRNA|length=727bp|location=Sequence derived from alignment at KK037252.1:422617..423343- (Nannochloropsis gaditana)
TTCTGTGCCCGATTCGATGCTTCCTCTCAGTCGTTTTTACGCGTCATTTC
CTGGTCTCTTTTCCATTTCTCCTCAGTCCTTCTCGACCTTAATGGTGCTG
CTTACTTACCTGTTCTGCATCTTTCCCTCCCTCCCTCCCTCCCTCCTTCC
CTCCCTCCCTCGCCCCTTTCCTCTTCCCCTCCTCCCTTCCAGGACAACCG
CGTCACGGTGGTGCTCCGTTTCATCAACCGATCTTCCTACCTCGCACTCT
GCAAGGACGTCACACGCCGCCAGCGGCGTGTGAAACGAAGGCGCGAGGGA
GTGCGGGAAGGAGGGCACGAGGGAGGGCGGGAGGGTGGGCGGGAAGGAGG
GCGAGAGGCTGGGACGAAGAAGGCGAAGGAATGAGACGATTTGAAAGGAG
AGCGTCGAGCTGACATGGCGAGGGAGCATGTGAGACACGTTCTGTGGCCT
TACCCAGCTTTGGTGGGGCTGAAAAAGAGCTATGGCGTGGTTTTGTATCT
ATCGAATGTCCCGGCTGGCAGGACGAATGCATCCGAAGGGGGGGGTTCGG
GACGGGCCCGTGGATAGTGCCAAGGGATGCGAACAACTAAAGTATTGTAA
TGGCAAATAATGGTGTCCCAAAACAAGCCACTGGGCGAGGAGTCTCGGCG
TGTCGACCGACTTGAACGGTGCGATAGGGCTAAGAAAGAAGTAATTAAAC
CTCTTTGTTTTAATGTGGTCATTTTGC
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Coding sequence (CDS) from alignment at KK037252.1:422617..423343-

>rna9335 ID=rna9335|Name=rna9335|organism=Nannochloropsis gaditana|type=CDS|length=384bp|location=Sequence derived from alignment at KK037252.1:422617..423343- (Nannochloropsis gaditana)
TTCTGTGCCCGATTCGATGCTTCCTCTCAGTCGTTTTTACGCGTCATTTC
CTGGTCTCTTTTCCATTTCTCCTCAGTCCTTCTCGACCTTAATGGTGCTG
CTTACTTACCTGTTCTGCATCTTTCCCTCCCTCCCTCCCTCCCTCCTTCC
CTCCCTCCCTCGCCCCTTTCCTCTTCCCCTCCTCCCTTCCAGGACAACCG
CGTCACGGTGGTGCTCCGTTTCATCAACCGATCTTCCTACCTCGCACTCT
GCAAGGACGTCACACGCCGCCAGCGGCGTGTGAAACGAAGGCGCGAGGGA
GTGCGGGAAGGAGGGCACGAGGGAGGGCGGGAGGGTGGGCGGGAAGGAGG
GCGAGAGGCTGGGACGAAGAAGGCGAAGGAATGA
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Synonyms
Publications