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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101155g4.444.mrna |
| Orig protein id | gnl|cribi|Naga_101155g4.444 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:419979..422493 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9334 ID=rna9334|Name=rna9334|organism=Nannochloropsis gaditana|type=mRNA|length=2051bp
CATTCAAACCTCTCACCACGCTTACATTTACTCTCACCATAATTCGTGCC
ACCAGGCAGTGTCGTGGCATTCGGCACATGGCCACGCTCACTTCGCCTCT
GGAGGGGCTTCTGAAAGGGCGCCTCCAGCCTTATCAGAAACGCGAGAAGG
AGGAAGAAAGTTGTTACGCAATGACGGAACCCTCCACGGAAGGGGAGGAG
GAAGACGAGGAGAGGGAAGGATTTGCCTACGACGAGACACCTAGCTGTGG
CATGTTTTCCCCTCCTTTCCCCCCCGAAGATATGCCGCCCACGGCCACTT
CGCCCTGGTTTCTCGACGATTCACGAGAAGAGCAGCCAACTTCGCGGCAT
TACCCTTCGGGTCCCACCCCAGGCGGCTTCGCCCCTACGCAGGGTGCTCA
AGACTTTGACATGCCGTCCGGCCCCTCTTCCCCTTCCTCCGTCGCCTTTT
CGCTCCCTCCGCCTTGTCCTTCCGCCCCCCACAACGCGTTACCTTTCCAG
CAAGCGTACTACTACCACCAATGCCAAGCCCCCCAGAGCCAAGCGACTTT
GGAGGCACGTTACTTACAGCGGTTGCGACAGCGGAGAGGGGAGGCGCAGC
GAGGGGGAGGAAGAAGGGGAGTGAGTGTGGTGGTCTTGCCCACTTCCTCG
TGCAAACCTTTTTCGCACGCCAAGCACCTGCAACCGCCTGGGAAAGGTCG
AATTTCCTGGAAGAAGGAGGGGAAAGGGAACCGCACCTCCTCTTTCCCTC
CGCACAGGGAACTATGGGAACCTCATGGACGGAGGGAGGGAGCCTGGTGG
AGGGAGGAGGCTAACGTCCAGAGCGAGGCGTGCCTGGGCCCTTCTGTGGA
CTTCATGGAGGGAGGACAAGGGGCGGAGGACATCGACATAAGCGAGCAGG
GGGACTGGGATATGATGGAAGAGGAAGACGAGGTGGAGGAGGACGTGGAG
GAGGAGGTGGAGGCAGAGGAAGGGGACGAAGAGGACTTGGAGTCATTGAT
GGCGTCCGAGGGAGGGGAGGTTCAGGCGTGGCAGGGAGCATTATATGAGA
AGGAAGAAGCGGGAGGCCGGTCCGCCTCCTACCCCTCCCGCCCGTCCTCG
GCCACGACCTCTGTCCCTCCCTCCTCCTCCCTCCCGCCCCTACCACGGTC
CAGACGGCGCCTCTCCCGTACCCGAGGCGCAGCGTGGCCCCCCTACCTCC
TTCCCTCCCTCCCCCAACCCCTGGCTTTGAAGGGTGGCACGTGGGGAGCC
GCTATCACATGCTGCGACTGTTGGGCTCGGGCTCGTATGGGGACGTGGGG
GAGGCGTGGGACGGGGCAATGGGTCGGAAGGTGGCGATCAAGCGCATCCG
CAACGTCTTCGACAACATCACGGACGCGCGTCGGATCTACCGGGAGGTGT
ACATCCTCAAGCAGCTTCGGCACCACCCGAACATGGTCTCCCTCCTGGAC
ATTGTCCACCCCGGCCCTTTCTCCGCCTTTAACGACCTCTATCTTGTCTT
CGAATGCCTTGACACGGATCTATACAAATTGATCCTGTCGCCCCAGCAAC
TCTCGGACGAGCACATTCAAGCCTTTGTCTACCAGCTGCTTTTGTCCCTC
AAGTATCTGCAGTCTGCCCACGTCATTCATCGGGACTTGAAACCGGCCAA
CATCCTCCTCAACGAAGACTGCTCCCTCAAGCTCTGTGACTTTGGCCTCG
CCCGTGTGGTTAACCACCACTGTGTCCGTGCTGCCCCGGCGCCGGGTTGT
CGGCAGCAATCGCCGTCGCCGGAAGACACCGAGGACGACGCTCAAGCCTC
CTCCCCGACCTTGGACGGACGTGGCTACCAAGCTCCCTCGCCTTGTGCCC
TCCCTTCTTCCCTCTCTCGCCCTCGATTGGTGCGTCGGCAGATGTCTGAA
TGCGCTTTGAACGAGGAAGTAGTGGCGGCTGCCGGGATGGGTGCCCCGCC
CTCCGTCCCGCCCTCTGTCCCGCCCTTGGTCAAGTCCTTGGGCCCCCCTC
CTCGCCTGACACGGCAACTTACCAAACACGTGGTGACCCGGTGGTACCGG
T back to topprotein sequence of rna9334 >rna9334-protein ID=rna9334-protein|Name=rna9334|organism=Nannochloropsis gaditana|type=polypeptide|length=102bp
MCAGKMKVNLMQGGIRKDLGGRRATVGRPRQLSDDIRVGFLRLVEPVLGG
GDGTDDRCCGSTGQERKGAGGRVVQGNGWERDRRNEMKRGKGRFSQLEYF
RS back to topmRNA from alignment at KK037252.1:419979..422493+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9334 ID=rna9334|Name=rna9334|organism=Nannochloropsis gaditana|type=mRNA|length=2515bp|location=Sequence derived from alignment at KK037252.1:419979..422493+ (Nannochloropsis gaditana)
CCTCGGCCATTCTCGGACTTTTTCCCGGGGGGCGCATGCGGGGGCCCTTG
ACCTCCTCCGGCGGATGCTCGTCTTCAATCCGGACAAGCGCGTCACCGTC
GACGAGGCGCTTCAGCACCCGTACTTGGCAAAGGtatccgccctccctcc
ctccttccctctctcactccctctttccctccctccttccctccctcctt
gatgcACGTCCGTTTCAACGTgctctgtctcctcttcgTGTTGCGGGTCT
GCACCCGCCCAACGTTAGCACGGCCACACACCCAAGAGTCCtgatccctt
cccttcccttccctccctccctccctccctccccccctccctccttagaT
TCGGGATCCCCGGTTGGAGATCAGCATGGCGACGCCCTTGAGGGACGGAA
TCACGACCGGGTGGGGCATTGCCGAGCTGAAAAGGGCCCTGTACTCGGAG
GTGTGCGATGTGATcgaggcaggcagggagggagggagggagggcaggca
ctgagggaaggaaggaagggggaggatggtgggtggagtggaaggagggc
gggggggaggacggggggaagggagggggagagggtacGTCATATGGACA
CGAAAGGGAAATGAAGAAAtatagggaaggaggaagagagaaaggaaaag
gcagTGCCCATTCGAAAGggctggaaagggaggagttttgtggaaaggaa
ggatcgATGGCAGGATTTGAGTGGAAGAGATCGGTGgccgggagaagagg
agggggagcggacTATGCGGCCTCCTAGTGCCCCCGCAGAGTCTGCCTTA
AGTAGAGGAGGAAATAGCGATAATCTAGACATAACCATCGATTATCCAGC
CCGCTTAGCGAAGGAGTCCAGCAGTAGCAATAGCAAGACAGTACGTATCG
GTAACACATAGAAAACTAGATTCATGAGACCTGGGGTCGAGGAAGCTTCT
CCGGGGCGCCCGCTCCAGGCACGCCTGAAGCGGGCGGAAACGGCCAAAAA
CGCAAGTGTAGGCGTTTTTTTtgaatggagggaaaaaaggaccgGTCGGG
GCGGGCCAGGGGTCGGAAAATGACCGAAAAAAGCCGGCATGcgccggcgg
gggcgggggcgagtgGGACCTTTAGCCTGAGGGAACCAGGGAGTGCGTGT
GGGACAGGTTGACCGCAGCCCTGTCGCTGGTTGCTGGCTCTCTGACACCC
GTGCTTCGTGGCCGTGTGCCCCAGGGAGGGCTGCAACCGGGTCCTGTGGG
CTCAAACGCCCGGCGCGGGTTCTAAacagaaggagacgaagtACATGCCA
TTTTTAAAATCGTAGTTTTAGATATCGACATTCTAGAAGAGGGACAAGAC
CGATGTGCGTGGTCAGGGGCGGGCCCGTAATTTTGCATGGTAGTGTACCA
AGAATAAGAGGGGAGGTCATGGGGAAAACGACGGGGCGAAGAGATATAGG
GAGACTGTGACGCGATTAGAAGTCAAAGATGTGTGCAACAGGTATAGATT
ACATTTTTGGTCTGCGACGAAGACGGGCTTCGTCGCGTCGAACCGGActg
agagggagcgggatcGAATGCATTGAATTGAGAGTGATTTGAAATGATAT
GAAGTAGGGTGTCAGAGGGTCTTCGTTCGTGACGTGGATCGAATAGTTTT
AGGTAGGAATCATAGATGAACCCGGATCGACGCTCCGCCCCTGCGTCCTT
GCTGTGATAGAGCTAGCTACAGAACTTTGGGTActagggaagagaaagga
ggaatgcGTAGTCACGACAATTCGCCGTAAAGCGTCTAACCTCCGTAGAA
AAAGACTGCACGGTGAGGAGGATCGGAATATAAACATACGCCCGCGCCAA
GACCATCTCCTGGATCATGGCGCTGCCTCCCAGAAAAGAGATCACCGAGC
CACGGTCAACCAGTGCTTATGTGCGCTGGGAAAATGAAGGTCAATCTCAT
GCAGGGGGGAATAAGGAAAGAtctgggagggagacgtgctACGGTCGGGC
GCCCGAGGCAACTGTCGGATGACATCCGGGTCGGTTTTTTGCGCCTGGTT
GAACCTGTTTTaggcgggggagacgggACGGATGATCGTTGTTGTGGCTC
GACGGgccaggagaggaaaggagcaggcgggcggGTGGTGCAAGGGAATG
GATGGGAGCGTGATAGACGAAATGAAATGAAacgagggaagggcaggttT
TCGCAGCTAGAATACTTTCGCAGCTAGAATAGCAATAGGATTGCGGTCGA
AGATGTGAGTTTGAGATGGTCTTATCAGCACGTGACCGATAAAAACGACG
CTAAACGGCAGACCCTTGACGTCAGTAATGCCTACATACATACCTACACA
CACGCCATGGACGGCGGTCCTCTCGCTGTTTCTTACTtgttccctttctt
tccggCTTTCCACCAACGAAGTTTGCAGACGTACGACATCAAAGTGTGGA
GTGAGTTTTAAGGCATGTCCTAGTAAGCGCCATCGACTCGCGCGTTCTGA
CAAGGCTCTGTTCTC back to topCoding sequence (CDS) from alignment at KK037252.1:419979..422493+ >rna9334 ID=rna9334|Name=rna9334|organism=Nannochloropsis gaditana|type=CDS|length=309bp|location=Sequence derived from alignment at KK037252.1:419979..422493+ (Nannochloropsis gaditana)
ATGTGCGCTGGGAAAATGAAGGTCAATCTCATGCAGGGGGGAATAAGGAA
AGAtctgggagggagacgtgctACGGTCGGGCGCCCGAGGCAACTGTCGG
ATGACATCCGGGTCGGTTTTTTGCGCCTGGTTGAACCTGTTTTaggcggg
ggagacgggACGGATGATCGTTGTTGTGGCTCGACGGgccaggagaggaa
aggagcaggcgggcggGTGGTGCAAGGGAATGGATGGGAGCGTGATAGAC
GAAATGAAATGAAacgagggaagggcaggttTTCGCAGCTAGAATACTTT
CGCAGCTAG back to top
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