rna9329, rna9329 (mRNA) Nannochloropsis gaditana

Overview
Namerna9329
Unique Namerna9329
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length815
Alignment locationKK037252.1:404324..404836 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101579g2.6626.mrna
Orig protein idgnl|cribi|Naga_101579g2.6626
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:404324..404836 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101579g2gene9045Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9329rna9329-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21374.1cds9299Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9329 ID=rna9329|Name=rna9329|organism=Nannochloropsis gaditana|type=mRNA|length=815bp
TTCAGCAACTTCGGTCAATCGGTTTGACGCATTTCCATTGCAATTTCTAG
GAATTCCGTGGATTAAAAGCTGAGTGCAAGGCAGTTGTAGGAAGAAAAAA
GAAGCTCGCTTCACTTCCAGCGAGGAGTGCGCACTCAGGCAAGCAGGAGG
GGAGAGCCGAAGTGTTGAAGGGAATAATCAATACGACCGCAACCTGCCCC
TCATTACTTGGACCATCACAAGAGCCTGGACATAAATCATTATTCACCGC
GCTACAAACAGGTTGCTCTGAAGACGGGGGATGCGCAGCGGCAGCAACAG
CCGCAATGAAGAGGAGCACCATCGGGAGGGGGGTCGAGGACACGACGGCA
ATGAAGGGGCAACAGCTTCGCAATTTTCATCCTCAGTACCTAACAATAGG
GGCAGTGCGTTGACCCAAGGCCTGGCGGCCTTGGAACAGGGCCGCCTATC
GCGGGCAGGAATTGCAACTCCCACCCCTCCTCCCACCTCCTCCCTGCGCC
CCTGCCTCCCGCTTCAACCTCCTGCCTCCTCCCCCCCCGTTCCCAGCATG
ACTACGCCCTTGGCAGCGTTACACCCAGAGGAAGAAGAAGGCGAGCTCCC
CAGGACGACCGCCATGTCCACCGTGGCGTTTTCCTCCCTGCCCTCGTCGG
TCCCTCCCTTCAACCTCCTCCCCTCCCACCCCATCCCTCCTTCCTCCTTC
CTCATTGGCTCGCCGGACCCCGTGGTCGAACAATTCCCGGCTTCCTTGAG
CCGTGCTCGACCCGTGACTGCCCTTCATCTTCCATCTGAGGCGTCGGACC
GCCCTTCCCACCAGA
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protein sequence of rna9329

>rna9329-protein ID=rna9329-protein|Name=rna9329|organism=Nannochloropsis gaditana|type=polypeptide|length=117bp
MSTDKSALPADYIAADELSAVLRLATATMEESINPGNGAPNKTENTYKDQ
AGLPQPTGDADGGEEGGISKRMLKKMAKGKLKEKKEKKLPNPPKAKEEKS
GKPEKEEVKNANRSRVL
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mRNA from alignment at KK037252.1:404324..404836-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9329 ID=rna9329|Name=rna9329|organism=Nannochloropsis gaditana|type=mRNA|length=513bp|location=Sequence derived from alignment at KK037252.1:404324..404836- (Nannochloropsis gaditana)
ATGTCCACGGATAAGAGCGCTTTACCTGCCGATTACATTGCTGCGGACGA
GCTCTCTGCGGTCCTCCGCCTCGCAACGGCTACCATGGAGGAAAGCATAA
ATCCAGGCAACGGCGCACCGAACAAGACAGAAAATACTTACAAAGACCAA
GCGGGGCTCCCTCAACCGACTGGGGATGCAGACGGGGGCGAAGAAGGAGG
AATCAGCAAGAGAATGCTAAAAAAGATGGCAAAGGGCAAACTGAAGGAGA
AAAAGGAGAAAAAGCTTCCGTAAGTAATTGAGGAGGATTTTCTCTCCCGT
CTGCTTTCACATCCTTTATTGTTCACAAGACACTGACCTTTCCTCGGCGT
CCTGGCAGGAACCCTCCAAAGGCTAAGGAGGAAAAAAGTGGAAAACCTGA
GAAGGAGGAGGTTAAGGTACGTTCGAGCTTCGTCCCCCTTTCCCGCATAA
ATCCTCCCCAGGGACGCCGGTCTCCCTGCATTTCAGAATGCAAATCGATC
ACGGGTCTTGTAA
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Coding sequence (CDS) from alignment at KK037252.1:404324..404836-

>rna9329 ID=rna9329|Name=rna9329|organism=Nannochloropsis gaditana|type=CDS|length=1062bp|location=Sequence derived from alignment at KK037252.1:404324..404836- (Nannochloropsis gaditana)
AATGCAAATCGATCACGGGTCTTGTAAGAACCCTCCAAAGGCTAAGGAGG
AAAAAAGTGGAAAACCTGAGAAGGAGGAGGTTAAGATGTCCACGGATAAG
AGCGCTTTACCTGCCGATTACATTGCTGCGGACGAGCTCTCTGCGGTCCT
CCGCCTCGCAACGGCTACCATGGAGGAAAGCATAAATCCAGGCAACGGCG
CACCGAACAAGACAGAAAATACTTACAAAGACCAAGCGGGGCTCCCTCAA
CCGACTGGGGATGCAGACGGGGGCGAAGAAGGAGGAATCAGCAAGAGAAT
GCTAAAAAAGATGGCAAAGGGCAAACTGAAGGAGAAAAAGGAGAAAAAGC
TTCCAATGCAAATCGATCACGGGTCTTGTAAGAACCCTCCAAAGGCTAAG
GAGGAAAAAAGTGGAAAACCTGAGAAGGAGGAGGTTAAGATGTCCACGGA
TAAGAGCGCTTTACCTGCCGATTACATTGCTGCGGACGAGCTCTCTGCGG
TCCTCCGCCTCGCAACGGCTACCATGGAGGAAAGCATAAATCCAGGCAAC
GGCGCACCGAACAAGACAGAAAATACTTACAAAGACCAAGCGGGGCTCCC
TCAACCGACTGGGGATGCAGACGGGGGCGAAGAAGGAGGAATCAGCAAGA
GAATGCTAAAAAAGATGGCAAAGGGCAAACTGAAGGAGAAAAAGGAGAAA
AAGCTTCCAATGCAAATCGATCACGGGTCTTGTAAGAACCCTCCAAAGGC
TAAGGAGGAAAAAAGTGGAAAACCTGAGAAGGAGGAGGTTAAGATGTCCA
CGGATAAGAGCGCTTTACCTGCCGATTACATTGCTGCGGACGAGCTCTCT
GCGGTCCTCCGCCTCGCAACGGCTACCATGGAGGAAAGCATAAATCCAGG
CAACGGCGCACCGAACAAGACAGAAAATACTTACAAAGACCAAGCGGGGC
TCCCTCAACCGACTGGGGATGCAGACGGGGGCGAAGAAGGAGGAATCAGC
AAGAGAATGCTAAAAAAGATGGCAAAGGGCAAACTGAAGGAGAAAAAGGA
GAAAAAGCTTCC
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Synonyms
Publications