rna9319, rna9319 (mRNA) Nannochloropsis gaditana

Overview
Namerna9319
Unique Namerna9319
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1876
Alignment locationKK037252.1:374904..375305 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103430g1.8513.mrna
Orig protein idgnl|cribi|Naga_103430g1.8513
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:374904..375305 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_103430g1gene9035Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9319rna9319-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21384.1cds9289Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9319 ID=rna9319|Name=rna9319|organism=Nannochloropsis gaditana|type=mRNA|length=1876bp
CGAATGCTAACCAGGCACGAGGCTGCGACAACTTCTTGGAAACCATTTTG
TGGGTGTGTGGGAAGGCAGGGTAGCTGCATTCCTGTTGTTAGTGTTTTTA
TTCCCACCAGGTCTTGATTTAGAAATTTTATCATTTTTGGGGGGGACGAA
GAGCCTGACATAGGTTTTCAGAACGCAGTGCGTGTTCCGTCATATCCTAT
TCGAAGGTTGGCGGGGTCGATGGGATGTATCGGATCTTTCTTTTCCACCT
CGCAACCCGTCACAGTGTCCCCACAAAGGCTGCAAACATCGTTAGGAGTT
AGTAAAGTGGCATTGCATGCATTTGGATTAATTTTGGGCGTCCCTGTCCC
TCTTTCTTTCCTAAGCCCTAGATTGCTTGCATCGTCGGCCATCCATCTGA
CTAGATTAGATCCACTTTTCTAAAAAATCACGAAACGCGCAAGACGTGTT
TTTTAAAGCCTGTACACGTAAATTACATGAATCTCGGCGCAATGGCTTCT
CTTTTTCTCTTCACGCCTCGATTCAGGACAGACAATTTTTCTTTTGTTCT
TCGTTTTCCTACTCTGATGACACTGAGAATCTCATAAAGTTTTCCATTTT
CCAACATTTTGAAGGAAACAAACTACCCACCACTACCAACAACACCATGC
CGACAATCCTTTTGGGAATGGGGAACCCTCTCCTCGACATCTCCGCGGAA
GTGCCGCAGGAGGTGCTGGATAAATATGAGCTCAAGTTGGACTCGGCCAT
CTTGGCGGAGGAGAAGCACCTGCCCCTCTATAAGGAATTGGTCGACGCCT
ACAAGGTGCAATACATCGCAGGAGGCGCCACCCAGAACGCCATCCGTGTG
GCCCAATGGATGTCGCAGACACCTGGGTCCACCAGCTTTTTTGGATGCAT
CGGAAAAGACGATTTCGGGGCGGAACTTCAAAATTGCGCGAAGGCCGACG
GGGTCAATGCCTTCTATAAGGAAGATCCCGAGACCCCGACAGGCACCTGC
GCGGTGCTGGTGAAAGATGGAGAGCGGTCTCTCTGTGCGAATTTGGCTGC
CGCCAACAAATTCACCGCGGACCACCTGGCCTCCGTGAAGGCCAAGGAGA
TGATCGCGGAGGCCAAGATGTTTTACATCGCCTCCTTTTTTCTGACCGTC
TCGGTCGAGTCTTTGCTGGTGGTGGCCGACCATGCCGTGGAGCACAACAA
GATTTTTGCCATGAATTTATCCGCGCCTTTTTTGATCCAATTTTTCGCGG
AGCCCATGGCCCAAGCCCTGCCCTACACCGACTACGTGTTTGGGAACGAA
TCGGAGGCCACGGCCTACGGTGAATTGCAAGGGTGGGGCACCGACATCCC
GACCATTGCCCTGCGCCTGGCGGCGGCGCCGAAAAAGAGCGGGACACGCC
CTCGGGTGGTAGTGTTCACCCAAGGGAGCGAGGCGACCGTGGTCGCCAAG
GAGGGGCAGGTGGAGAAATTTCCGGTGGAAATGTTGGAAAAGGACAAGTT
GGTGGATACGAACGGGGCGGGAGATGCCTTTGTGGGTGGTTTCCTTTCCG
TCTTGATGCGGAAGGAGGGGGCGGCGATGGAGGAATGCGTCCGGGCGGGG
CACTGGGCAAGTCGGGTCATCATCCAGCGGAGTGGGTGCACGTTCCCGAA
GGAGTGTGACTACAAATAGAAAGGAGGGGAAAGGGAGGGAGGGAGGAGGG
AGGGAGGGAGGGAGGGAGGGTCTCGAGAGGCAGGAAAAGACTAGGTAATA
CCGAGCAAAACATCACGTTTCATTGCTGCGGGTGATCCACCGTTCCACTT
CAACCCAATTGAAGCAGCCTGGATTCATGCTCGTGGCTGCGGCGGTATCT
TGTTTTTGTTTCTTGGTTTCTTTTCC
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protein sequence of rna9319

>rna9319-protein ID=rna9319-protein|Name=rna9319|organism=Nannochloropsis gaditana|type=polypeptide|length=98bp
MHQEKSLARCHASLPANQQRKWLPLAFFERDADPNPGGLRGGERGEGGGR
GGSRNGGGDTGRSLVQIGEGSAGQGGQGDGEDQFGGHPPGADELRPHK
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mRNA from alignment at KK037252.1:374904..375305-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9319 ID=rna9319|Name=rna9319|organism=Nannochloropsis gaditana|type=mRNA|length=402bp|location=Sequence derived from alignment at KK037252.1:374904..375305- (Nannochloropsis gaditana)
ATGCATCAAGAAAAATCTCTGGCGTGACGAGACCTGCGTGTGTCTCACGT
CTTTCGATAAGGCACGCCGAAGCTTCTCGAACCTCTGCTTTCGCTGATTC
TTCCCTTCCCTCCCCATCCCCTGCGCAGGCGATGCCATGCCAGCCTCCCG
GCAAACCAGCAACGGAAGTGGCTACCCCTTGCATTTTTTGAACGTGACGC
AGATCCAAACCCTGGAGGTCTGCGAGGGGGGGAGCGAGGGGAAGGAGGGG
GGCGGGGAGGAAGTAGGAACGGGGGCGGTGATACCGGACGATCGCTTGTC
CAAATTGGAGAAGGAAGTGCGGGCCAGGGCGGCCAAGGAGATGGCGAAGA
TCAATTTGGCGGCCACCCCCCAGGGGCAGATGAGCTTCGACCACATAAGT
AA
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Coding sequence (CDS) from alignment at KK037252.1:374904..375305-

>rna9319 ID=rna9319|Name=rna9319|organism=Nannochloropsis gaditana|type=CDS|length=594bp|location=Sequence derived from alignment at KK037252.1:374904..375305- (Nannochloropsis gaditana)
GCGATGCCATGCCAGCCTCCCGGCAAACCAGCAACGGAAGTGGCTACCCC
TTGCATTTTTTGAACGTGACGCAGATCCAAACCCTGGAGGTCTGCGAGGG
GGGGAGCGAGGGGAAGGAGGGGGGCGGGGAGGAAGTAGGAACGGGGGCGG
TGATACCGGACGATCGCTTGTCCAAATTGGAGAAGGAAGTGCGGGCCAGG
GCGGCCAAGGAGATGGCGAAGATCAATTTGGCGGCCACCCCCCAGGGGCA
GATGAGCTTCGACCACATAAGTAAATGCATCAAGAAAAATCTCTGGCGCG
ATGCCATGCCAGCCTCCCGGCAAACCAGCAACGGAAGTGGCTACCCCTTG
CATTTTTTGAACGTGACGCAGATCCAAACCCTGGAGGTCTGCGAGGGGGG
GAGCGAGGGGAAGGAGGGGGGCGGGGAGGAAGTAGGAACGGGGGCGGTGA
TACCGGACGATCGCTTGTCCAAATTGGAGAAGGAAGTGCGGGCCAGGGCG
GCCAAGGAGATGGCGAAGATCAATTTGGCGGCCACCCCCCAGGGGCAGAT
GAGCTTCGACCACATAAGTAAATGCATCAAGAAAAATCTCTGGC
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Synonyms
Publications