rna9310, rna9310 (mRNA) Nannochloropsis gaditana

Overview
Namerna9310
Unique Namerna9310
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length456
Alignment locationKK037252.1:352931..354485 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100215g4.1635.mrna
Orig protein idgnl|cribi|Naga_100215g4.1635
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:352931..354485 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100215g4gene9027Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21393.1cds9280Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9310rna9310-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9310 ID=rna9310|Name=rna9310|organism=Nannochloropsis gaditana|type=mRNA|length=456bp
ATGGCAAGGGCATACATAGAGCTGCTTGGAGCGTGGGGAAGGCAACAGTC
CAGGTGGCCATGGAACCAGCCGAACGTGTACAGAGTACGTGGGAATCGAT
GCACTGAGATATTAAAGAGGCACCTTTCGGGGATTGAGCCAGCAGCCTCG
TCAGTCGCATGCGTAGTGGACTGCCTCCCTAACGCGGAGACCCTTGGCTT
GCCAGCTCTCACAATAAATATATGTGAGGCCTCTGGGGGCACGGCCATGG
GAAGGCAGCATCGAAATTGTCCAGAGCGAATTTACAAACGTCATAATTAC
AAGTCGTTGAGTGTCGAAAAAGTATTGGATGGACAGCTCCCACAGGAGTG
TCAGACAGCACGATTGATTTATTCCAGGGGAGAGGCAAGAGGGTTTTACA
CTGCCTCGCACCACCAGACCAACGAGGGTGTCGCAGGCGGAGACGGACGC
TTGTGA
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protein sequence of rna9310

>rna9310-protein ID=rna9310-protein|Name=rna9310|organism=Nannochloropsis gaditana|type=polypeptide|length=251bp
MPATATATTAPPTSGTFLPYDTPNVDSSPVNQKRGARTPSHGHFQGLSSD
SDRHSPHSSPVSPTPRRLPAGTGSPYRPPSHPPSSPSTIAPPHHRLLHSS
DLERGRGGGTGEGKEGGREGTGGAPPDDEEEEEDHEQFRLGKFAYSFTLL
LFGALAVGLLITGALMFETFVGKILMTGGGGLVLVMLCMLMCGGGEEGRE
GGGRKGRRKGVVNRHVSYCATRNGRGGCWREGGEEGEGEKTPRVVERGGS
K
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mRNA from alignment at KK037252.1:352931..354485-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9310 ID=rna9310|Name=rna9310|organism=Nannochloropsis gaditana|type=mRNA|length=1555bp|location=Sequence derived from alignment at KK037252.1:352931..354485- (Nannochloropsis gaditana)
CAGGCTGCAACTCTCAGTCCCGAAATGCACCAGCGAAAGCCAGTCTTGGC
CTCTCTAGCGATAAAATCAACAAGACGAGGGGAGACCCCTGATCCCTGAT
GCTTTTACTTTGCTCGTGTCTCAAAAATGGCGGCATGGAGAAATGTGATG
AGATGCATTTTTTTTCTTTCTTATTTCGGGGCTCAGAGATCGTGAGATCA
GACAGTCGCTGTTTAATCTTGTGACGTGACACGGTATCGAAAATCTCACC
TGCATGCGCTCGTACATACGGACAGACATCAAACAGCAACGTCCTTCTGC
TTTCTGTTTGTCTTCCGAAATACTTCAGTCGTGGGACTCGGCCCAGTGCG
CGCCATTAACGAGAAGCATTTCGACATTCCACACGCTACGACGGGGGACA
ATAACTTTTCGTGCTCTTTTTGCCAGCGCGCCTTTACTTCCTAGCCTAGA
TGCCCCATCGAGGACCCTTCATGGCATAGCCTTAAAAAAGCAGCGGGACA
CGAGTCTTGGAAAGGCAAGAGCAGCGTGACATTAGCGTCAACGGCATATC
AACCGTCCTTCTTCCCGCATCCATTGCCTCTATATACGTCCTCCTTTCAT
GCCTGCAACCGCCACCGCCACCACCGCCCCCCCCACGTCCGGCACCTTCC
TGCCCTACGACACACCCAACGTTGACAGCAGCCCAGTTAACCAAAAAAGG
GGGGCCAGGACTCCCTCCCATGGCCATTTTCAAGGGCTTTCCTCCGACTC
AGACCGCCACTCTCCTCATTCCTCCCCCGTGTCTCCAACCCCCCGGCGCC
TGCCCGCCGGCACTGGAAGTCCCTACCGGCCTCCGTCCCACCCTCCTTCC
TCCCCTTCTACCATTGCTCCGCCTCACCATCGCCTACTGCATTCGAGCGA
CCTGGAAAGAGGGAGGGGAGGAGGAACGGGGGAAGGGAAGGAGGGAGGAA
GAGAGGGCACCGGGGGGGCTCCGCCCGACGACGAGGAGGAGGAGGAAGAT
CACGAGCAGTTCCGCTTAGGAAAGTTCGCTTATTCCTTCACCCTTTTGCT
TTTCGGGGCCTTGGCTGTGGGGTTGCTCATCACAGGGGCGCTGATGTTCG
AGACTTTTGTGGGGAAAATCCTCATGACCGGGGGCGGGGGGTTGGTGTTG
GTGATGCTGTGCATGCTCATGTGCGGAGGGGGGGAGGAAGGGAGGGAGGG
AGGGGGGAGGAAGGGGAGGAGGAAGGGAGTGGTGAATCGACACGTCTCTT
ACTGCGCAACGAGGAACGGAAGAGGAGGCTGTTGGCGGGAGGGAGGGGAG
GAGGGAGAGGGTGAGAAAACACCACGAGTTGTTGAGAGGGGGGGAAGCAA
ATAAGGCCAGGAAAGCACACGGTTGCGGTAATCTTACTTTCTATAAACAA
GCAACTCACAAGCGTCCGTCTCCGCCTGCGACACCCTCGTTGGTCTGGTG
GTGCGAGGCAGTGTAAAACCCTCTTGCCTCTCCCCTGGAATAAATCAATC
GTGCTGTCTGACACTCCTGTGGGAGCTGTCCATCCAATACTTTTTCGACA
CCTCA
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Coding sequence (CDS) from alignment at KK037252.1:352931..354485-

>rna9310 ID=rna9310|Name=rna9310|organism=Nannochloropsis gaditana|type=CDS|length=756bp|location=Sequence derived from alignment at KK037252.1:352931..354485- (Nannochloropsis gaditana)
ATGCCTGCAACCGCCACCGCCACCACCGCCCCCCCCACGTCCGGCACCTT
CCTGCCCTACGACACACCCAACGTTGACAGCAGCCCAGTTAACCAAAAAA
GGGGGGCCAGGACTCCCTCCCATGGCCATTTTCAAGGGCTTTCCTCCGAC
TCAGACCGCCACTCTCCTCATTCCTCCCCCGTGTCTCCAACCCCCCGGCG
CCTGCCCGCCGGCACTGGAAGTCCCTACCGGCCTCCGTCCCACCCTCCTT
CCTCCCCTTCTACCATTGCTCCGCCTCACCATCGCCTACTGCATTCGAGC
GACCTGGAAAGAGGGAGGGGAGGAGGAACGGGGGAAGGGAAGGAGGGAGG
AAGAGAGGGCACCGGGGGGGCTCCGCCCGACGACGAGGAGGAGGAGGAAG
ATCACGAGCAGTTCCGCTTAGGAAAGTTCGCTTATTCCTTCACCCTTTTG
CTTTTCGGGGCCTTGGCTGTGGGGTTGCTCATCACAGGGGCGCTGATGTT
CGAGACTTTTGTGGGGAAAATCCTCATGACCGGGGGCGGGGGGTTGGTGT
TGGTGATGCTGTGCATGCTCATGTGCGGAGGGGGGGAGGAAGGGAGGGAG
GGAGGGGGGAGGAAGGGGAGGAGGAAGGGAGTGGTGAATCGACACGTCTC
TTACTGCGCAACGAGGAACGGAAGAGGAGGCTGTTGGCGGGAGGGAGGGG
AGGAGGGAGAGGGTGAGAAAACACCACGAGTTGTTGAGAGGGGGGGAAGC
AAATAA
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Synonyms
Publications