rna9309, rna9309 (mRNA) Nannochloropsis gaditana

Overview
Namerna9309
Unique Namerna9309
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2521
Alignment locationKK037252.1:352358..353080 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100215g3.1636.mrna
Orig protein idgnl|cribi|Naga_100215g3.1636
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:352358..353080 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100215g3gene9026Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9309rna9309-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21394.1cds9279Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9309 ID=rna9309|Name=rna9309|organism=Nannochloropsis gaditana|type=mRNA|length=2521bp
TCCGCTGCAATCTACTTGTGAGCTTGAGGCTTCGAAGGCTGCCTCTGTCG
CGGAGTTCCTGCCTCGTTCCAGTTTTCTATCCTCCCATCCTCCCTCCCAT
CCTCCCTCCCTCCCTCCCGCCCCGTCGCTCGAGGCGAAAGCCTTCATCCT
TCCTCCCTCGCTCCCTCGCTTTTTGCTTCTTTGGCGCGTTAATGAAAATA
TTTGGGGCCATTCGCCTCCTGCCTTTTGCGTAATCCTCGTTGGCGTTCTG
CAGAACGTTCTTTGGGCATCGCTGTACACCTACCAAAAGAAGTGTTTCGG
GGAAATCCGGATAACCTTCTTATTGACAATGACATCAGCTCGATCGGAGT
GGTCAGGGGGGTGGCCGCGCGTGGACTAACACGACAATGTACATGCTCCG
GGCTCTTTCGTGACGTCGTTGTCTGTTGGAAGCGGGGCCCAAGACAGATG
AGAATACTGACAAGCGGAGGTTTCGTCCGATGCATGTTTCCGTGCAACCC
CTTCTTGCATTTTCAAGACTGAGTCACCCATCATGCCTCTGTTTACATTC
GACAGGGTTTGAGGGGGACAGGATAGTGCGCATCGTCAAAGTGTGTCCAT
CGGTTTTTGGTGTTCACACCTCCCGAGCGCCTAGTTGACGGGACTTCTTT
GTGGGGGAAAAGGCAATTTGTATTCCAGTCATTTCCTTGGTCGCAGGCGT
CCTTTTCGGACAGTCGCATCCTCTACCTGGAGAAGACTCAAGTCCCCTGG
GGCCATTTGAACAGGAGCAGCCATGGGGATTGACCTTCATCTTCCCCTGC
CCGACCTGCCTCCCAACATGGCATGGGGGGGCATGCTGGAAGCCTATTTC
GCCAATGCCGAGGCCCTGGCGGAGCTGGCGGCCGCAGCCCGGAGTGCCGG
TGTGTCCAAACAAACAGTCGTGGAGGTGGTCGCCCTCCTGGTGGTGTCCG
CCATCACCTACTATCGAATGTACCATCAACTCCCCTACCCTCCCGATCCA
GCCCGGGAGCCTCGACTCCGACCATGCCCTCTGCAAACCGAGGCGACGGA
GGACGAGCATGTGGTCCCACAGGGCTTTTCCCACGAGGGGCAGCCGGCCT
CGGAACCGACGGCCTCCCTGCCTGCGATCCTCAACCACCTCTACGCCACG
CTGGCCGCCGCGCGTCTCCACGCCCCGCCCACTCTGCCTCTTCCCTCCCT
GCCCTCCCTGGCGATGGACCCACTGACATCCTTCCCCGCCAAGCTGCTGG
CGGAAATGCAAGAGAAATTGGCGGCCGTGGTGAAGGAGGGGGAGGAAGCG
GAATGGGCCTGGTTGTGCCTTTTGTTGCAACGCGTCTTGCACAAGGAGGA
CGGGACGGACGGGGACAGGGAGACGGGTCAGACCAGCCTGGCTACCCGGA
TGTTGAGTGCGGCCATGGCTCAATGCCGTCCCTTTCGGTGGCCGGGGGAG
GGGCCTGGGCAGGGTCTGGGGGAGGGAGGGAGGGAGGAAGGGAGGGAGAG
GGTGGAGGGAAAGCCCGCGCAGTCCATGTTTGGTTGGCCGATAGCCGACA
CGACTACGCATGACGATGTGTGTGATATCGATACAGAAGAAGCCGAGGCT
GCCGCAGAAGCCGCAGCAGCAGCTGCGGCCGCCTTGGCGGCCGCCAGCAA
GGCCGTACCGCCCCCTCATTTTCTCTCTACGGGCCTGCCCGACGAGGTTC
AATTGGAAATTGTCGAGTACTTGCAACCTCGGGACGTGCTGCGATTGACG
CCCGTCTCCCGGGCAGCCCGGAGGCTGGGGGAAGGGGAACAGGTGTGGCG
CACCAAGTGGGCGGCGCGTTTCGGGCCCATCTGGCGGTCGGCGCCCGTGC
AAAAGGCGGAGATGGCACGGAAAGCACGGAGGGCAGACGGTCAACGGGCC
TCGGCTACCGACGGGGAAATGGAAGGAGGCTGGCGGCATTTCTACTCCGT
CTTCGAGCTGGAGTGGGCTGCTTGGCTGTGCGCGGGCCGGAACAGGGAGG
ATTCGTGTTGGGTGGGACTTGAAGGGGGGGTCTATGACCTGACCGCCTTC
CTGGAGATACACCCGGGTAGCAAGGAGACGATTTTAGTGAACGCGGGGGG
AGACGCCACCGCCTTCTTTCAGGACGTGGGCCACAGTGCTCAGGCACGGG
CCATGATGGCGGACTTCTGCATCGTCCCTCCCCCTCCACAGGGGGTAGGG
CATACCGAGGCCTGCGTGCTCCATTCCGTCAAAGAAGCCTTGCGTGAGGG
TCGTGCGGGCATTGAGGGAAGGAAGGAGGGAGGGAAGGGAGGAGGACGCG
CGTTGATGGGCCGTGGGGGGGCCGCAGGCGCGGTGTCCACGTTGGCGGCC
CATTTGTCGGAACAAGCGGCGATGATGATGCGGAGGGGGGGGGGCGCGGC
GGTGGTGGAGGTTGGAGGGGGGGGAAGGGTGGAGGAAGTTGGGCAGGTCC
ATCGGGATGGCCTTCTTCACCACGTGAGTGAGTGGCTCTTGCCCCCTGTC
GTGCCCGGGGGGGGGGGATGA
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protein sequence of rna9309

>rna9309-protein ID=rna9309-protein|Name=rna9309|organism=Nannochloropsis gaditana|type=polypeptide|length=151bp
MARAYIELLGAWGRQQSRWPWNQPNVYRVRGNRCTEILKRHLSGIEPAAS
SVACVVDCLPNAETLGLPALTINICEASGGTAMGRQHRNCPERIYKRHNY
KSLSVEKVLDGQLPQECQTARLIYSRGEARGFYTASHHQTNEGVAGGDGR
L
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mRNA from alignment at KK037252.1:352358..353080+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9309 ID=rna9309|Name=rna9309|organism=Nannochloropsis gaditana|type=mRNA|length=723bp|location=Sequence derived from alignment at KK037252.1:352358..353080+ (Nannochloropsis gaditana)
ATGGCAAGGGCATACATAGAGCTGCTTGGAGCGTGGGGAAGGCAACAGTC
CAGGTGGCCAGTCGCGTCGCTTTCTGTGGGGAGCGGGCGCGCCGTCGTGG
ACCCCGCACTTGGAATTAAATGCTAGTGGAACCAGCCGAACGTGTACAGA
GTACGTGGGAATCGATGCACTGAGATATTAAAGAGGCACCTTTCGGGGAT
TGAGCCAGCAGCCTCGTCAGTCGCGTGACAGTCACATCTGTCCATGTTTT
CGAATCCACTCTTGGGCAAAAAGAAGTGATATAGATGCGTAGTGGACTGC
CTCCCTAACGCGGAGACCCTTGGCTTGCCAGCTCTCACAATAAATATATG
TGAGGCCTCTGGGGGCACGGCCATGGGAAGGCAGCATCGAAATTGTCCAG
AGCGAATGTGACGTTACGACCGTTACACTTTCAAGAAGGTAAAAGCGTTG
CAATTTGAAGTTACAAACGTCATAATTACAAGTCGTTGAGTGCAAGTTTG
GAAATTAAAAGAGATCTTTAGCGGGGCGCAcggacgaaggaaaggaaggg
gaagaagtgcAATAAAGAGTGACTGAGGTGTCGAAAAAGTATTGGATGGA
CAGCTCCCACAGGAGTGTCAGACAGCACGATTGATTTATTCCAggggaga
ggcaagagggTTTTACACTGCCTCGCACCACCAGACCAACGAGGGTGTcg
caggcggagacggacgCTTGTGA
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Coding sequence (CDS) from alignment at KK037252.1:352358..353080+

>rna9309 ID=rna9309|Name=rna9309|organism=Nannochloropsis gaditana|type=CDS|length=2280bp|location=Sequence derived from alignment at KK037252.1:352358..353080+ (Nannochloropsis gaditana)
ATGGCAAGGGCATACATAGAGCTGCTTGGAGCGTGGGGAAGGCAACAGTC
CAGGTGGCCATGGAACCAGCCGAACGTGTACAGAGTACGTGGGAATCGAT
GCACTGAGATATTAAAGAGGCACCTTTCGGGGATTGAGCCAGCAGCCTCG
TCAGTCGCATGCGTAGTGGACTGCCTCCCTAACGCGGAGACCCTTGGCTT
GCCAGCTCTCACAATAAATATATGTGAGGCCTCTGGGGGCACGGCCATGG
GAAGGCAGCATCGAAATTGTCCAGAGCGAATTTACAAACGTCATAATTAC
AAGTCGTTGAGTGTCGAAAAAGTATTGGATGGACAGCTCCCACAGGAGTG
TCAGACAGCACGATTGATTTATTCCAggggagaggcaagagggTTTTACA
CTGCCTCGCACCACCAGACCAACGAGGGTGTcgcaggcggagacggacgC
TTGTGAATGGCAAGGGCATACATAGAGCTGCTTGGAGCGTGGGGAAGGCA
ACAGTCCAGGTGGCCATGGAACCAGCCGAACGTGTACAGAGTACGTGGGA
ATCGATGCACTGAGATATTAAAGAGGCACCTTTCGGGGATTGAGCCAGCA
GCCTCGTCAGTCGCATGCGTAGTGGACTGCCTCCCTAACGCGGAGACCCT
TGGCTTGCCAGCTCTCACAATAAATATATGTGAGGCCTCTGGGGGCACGG
CCATGGGAAGGCAGCATCGAAATTGTCCAGAGCGAATTTACAAACGTCAT
AATTACAAGTCGTTGAGTGTCGAAAAAGTATTGGATGGACAGCTCCCACA
GGAGTGTCAGACAGCACGATTGATTTATTCCAggggagaggcaagagggT
TTTACACTGCCTCGCACCACCAGACCAACGAGGGTGTcgcaggcggagac
ggacgCTTGTGAATGGCAAGGGCATACATAGAGCTGCTTGGAGCGTGGGG
AAGGCAACAGTCCAGGTGGCCATGGAACCAGCCGAACGTGTACAGAGTAC
GTGGGAATCGATGCACTGAGATATTAAAGAGGCACCTTTCGGGGATTGAG
CCAGCAGCCTCGTCAGTCGCATGCGTAGTGGACTGCCTCCCTAACGCGGA
GACCCTTGGCTTGCCAGCTCTCACAATAAATATATGTGAGGCCTCTGGGG
GCACGGCCATGGGAAGGCAGCATCGAAATTGTCCAGAGCGAATTTACAAA
CGTCATAATTACAAGTCGTTGAGTGTCGAAAAAGTATTGGATGGACAGCT
CCCACAGGAGTGTCAGACAGCACGATTGATTTATTCCAggggagaggcaa
gagggTTTTACACTGCCTCGCACCACCAGACCAACGAGGGTGTcgcaggc
ggagacggacgCTTGTGAATGGCAAGGGCATACATAGAGCTGCTTGGAGC
GTGGGGAAGGCAACAGTCCAGGTGGCCATGGAACCAGCCGAACGTGTACA
GAGTACGTGGGAATCGATGCACTGAGATATTAAAGAGGCACCTTTCGGGG
ATTGAGCCAGCAGCCTCGTCAGTCGCATGCGTAGTGGACTGCCTCCCTAA
CGCGGAGACCCTTGGCTTGCCAGCTCTCACAATAAATATATGTGAGGCCT
CTGGGGGCACGGCCATGGGAAGGCAGCATCGAAATTGTCCAGAGCGAATT
TACAAACGTCATAATTACAAGTCGTTGAGTGTCGAAAAAGTATTGGATGG
ACAGCTCCCACAGGAGTGTCAGACAGCACGATTGATTTATTCCAggggag
aggcaagagggTTTTACACTGCCTCGCACCACCAGACCAACGAGGGTGTc
gcaggcggagacggacgCTTGTGAATGGCAAGGGCATACATAGAGCTGCT
TGGAGCGTGGGGAAGGCAACAGTCCAGGTGGCCATGGAACCAGCCGAACG
TGTACAGAGTACGTGGGAATCGATGCACTGAGATATTAAAGAGGCACCTT
TCGGGGATTGAGCCAGCAGCCTCGTCAGTCGCATGCGTAGTGGACTGCCT
CCCTAACGCGGAGACCCTTGGCTTGCCAGCTCTCACAATAAATATATGTG
AGGCCTCTGGGGGCACGGCCATGGGAAGGCAGCATCGAAATTGTCCAGAG
CGAATTTACAAACGTCATAATTACAAGTCGTTGAGTGTCGAAAAAGTATT
GGATGGACAGCTCCCACAGGAGTGTCAGACAGCACGATTGATTTATTCCA
ggggagaggcaagagggTTTTACACTGCCTCGCACCACCAGACCAACGAG
GGTGTcgcaggcggagacggacgCTTGTGA
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Synonyms
Publications