rna9296, rna9296 (mRNA) Nannochloropsis gaditana

Overview
Namerna9296
Unique Namerna9296
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length420
Alignment locationKK037252.1:306861..308319 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101166g1.1297.mrna
Orig protein idgnl|cribi|Naga_101166g1.1297
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:306861..308319 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101166g1gene9014Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21407.1cds9266Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9296rna9296-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9296 ID=rna9296|Name=rna9296|organism=Nannochloropsis gaditana|type=mRNA|length=420bp
ACGAGCCTCGTGGAAACCGAGCCGGCTGTAGAGAGCACACAGGAAAGGGT
AGGGACTGGGGCGGAAGCTGGGGAGGGAGACGGGGAATGGATCCCTTTCC
GGGAGCTTCGCTTCCTGGAGGCAGTGGGAGCAGGCCGGTCCGGCACGCTC
TGGCGCGGCGTTTGGAAAGGGCGGGAAGTGGCGGTGAAGGTGGTTAAGGT
GGCGGCGGGGGCCACGGGGAAGGGGGAAGGAGGAGGCAGGACAAACGAAG
GGAAGGAGGTTGGGGAGGCACGGCGGGCATTTGAGCGGGAGCGGCGGATC
GTGCGCGGCCTGCGACATCAGAACCTGTGCCCGCTCCTGGGGGTGACGAG
GGAGGGCAGGAGGGAGGCGGGAGGGAGGTATTGGCCTTGGTGTACGCCTT
CATGGAGGGCGGGTCTTTAG
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protein sequence of rna9296

>rna9296-protein ID=rna9296-protein|Name=rna9296|organism=Nannochloropsis gaditana|type=polypeptide|length=396bp
MTNSGLDDQNASTCILPSSVLRLRASDVASRAWLTPVCSDTVMWENDAGM
GLNLPKMDDAVSHASDGQFSGIRQAPKGPSYSFAADLNARGTEREAAAFT
PGVSLGSHKARGQRKFHDKHDQQHESTMQHTHQLSWRDASPPVPPPSPSS
RPYPAPRPRSTLSRNFRRQKSSSCGDMTNLLVPVLDSALSTNGSPCIPRV
PALSQHSRSDTHDSHGAPTGDLPSPRGLDNLPKRANAPDYLGRARVTSAK
VSLFSPPTSSSSLDPPSPPPSPPPSSPSRNRASRLNGERKGGSSRHKREL
QKASVVNELSHAAALLLIPSLLPPSSSPPSSSPPPLPDMRVLQDLVHAVR
LHLSRFPLRYCLAVEAREVLQHMSLLQQATRTDRVAIHVEEQPWGD
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mRNA from alignment at KK037252.1:306861..308319-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9296 ID=rna9296|Name=rna9296|organism=Nannochloropsis gaditana|type=mRNA|length=1459bp|location=Sequence derived from alignment at KK037252.1:306861..308319- (Nannochloropsis gaditana)
CAGTTTCCGAGGCTTCATATAGGAAGTTTCACTCACGCGTTGATTTTTGC
GTTTTCCACCCCCAACAGTACCCCAGTAACGAGACAGTGCATCGAAAATC
ACGTGTCTCGACTGTGCTGTCGTTCGTCTTTCTAATGGGAGTTTAGGCGT
ACCGCTTATAGAGAAGGACCGAGACTCCCGCGGTTGGTGTCAGCCTCCGG
AATACCCGCCACTGCATTCGTTTCAATCGTGCACTTGACACCAACCCCAA
ATTGAAAGTACACGCGAAATATGACCAACAGCGGTTTGGACGACCAAAAC
GCATCAACTTGTATCTTGCCGTCCTCGGTGTTACGGTTGCGAGCATCCGA
TGTGGCTAGCCGGGCCTGGCTCACGCCTGTGTGCTCTGACACAGTCATGT
GGGAGAACGATGCTGGGATGGGGCTAAACTTGCCCAAAATGGACGATGCG
GTGTCGCATGCCTCAGACGGGCAATTTTCAGGAATACGACAGGCTCCAAA
GGGACCTTCGTATTCCTTTGCGGCCGATTTGAACGCCCGTGGGACCGAGA
GGGAGGCAGCAGCATTCACCCCAGGCGTGTCCCTTGGCTCCCACAAGGCC
CGGGGTCAACGAAAGTTTCACGACAAACACGACCAGCAACATGAGAGCAC
CATGCAGCACACGCACCAACTCTCTTGGAGAGACGCGTCTCCACCCGTGC
CTCCTCCCTCCCCTTCCTCTCGACCGTACCCCGCCCCGCGGCCCCGGTCC
ACACTTTCGCGCAACTTTCGCAGGCAAAAATCCTCAAGCTGCGGCGACAT
GACCAATCTACTCGTGCCAGTCCTTGACTCCGCCTTATCCACCAACGGCT
CCCCCTGCATCCCACGTGTGCCAGCCCTATCTCAGCACTCCCGCAGCGAC
ACCCATGACTCTCACGGCGCTCCTACAGGCGATCTCCCCAGCCCCCGGGG
CCTCGACAACCTTCCCAAGCGTGCCAACGCACCGGACTACCTGGGCCGTG
CTCGCGTTACGTCCGCAAAGGTATCCCTCTTCTCGCCCCCCACCTCGTCC
TCCTCCCTTGACCCGCCCTCCCCCCCGCCCTCCCCCCCGCCCTCCTCCCC
GTCCCGCAACCGGGCCAGTCGGCTCAATGGCGAGAGGAAAGGCGGCAGCA
GCCGTCACAAACGAGAACTCCAGAAGGCATCCGTCGTCAACGAGCTCAGT
CACGCGGCCGCCCTCCTCCTTATCCCCTCCCTCCTCCCCCCTTCCTCTTC
CCCTCCTTCCTCCTCCCCTCCCCCCCTTCCCGACATGAGGGTTCTTCAGG
ACCTAGTCCATGCCGTCCGCCTCCACCTTTCTCGCTTCCCCCTCCGCTAT
TGTCTGGCGGTGGAGGCACGTGAGGTCCTCCAACACATGTCGCTCCTCCA
ACAAGCTACCCGGACTGACCGCGTTGCCATCCATGTGGAGGAGCAGCCTT
GGGGAGACA
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Coding sequence (CDS) from alignment at KK037252.1:306861..308319-

>rna9296 ID=rna9296|Name=rna9296|organism=Nannochloropsis gaditana|type=CDS|length=1189bp|location=Sequence derived from alignment at KK037252.1:306861..308319- (Nannochloropsis gaditana)
ATGACCAACAGCGGTTTGGACGACCAAAACGCATCAACTTGTATCTTGCC
GTCCTCGGTGTTACGGTTGCGAGCATCCGATGTGGCTAGCCGGGCCTGGC
TCACGCCTGTGTGCTCTGACACAGTCATGTGGGAGAACGATGCTGGGATG
GGGCTAAACTTGCCCAAAATGGACGATGCGGTGTCGCATGCCTCAGACGG
GCAATTTTCAGGAATACGACAGGCTCCAAAGGGACCTTCGTATTCCTTTG
CGGCCGATTTGAACGCCCGTGGGACCGAGAGGGAGGCAGCAGCATTCACC
CCAGGCGTGTCCCTTGGCTCCCACAAGGCCCGGGGTCAACGAAAGTTTCA
CGACAAACACGACCAGCAACATGAGAGCACCATGCAGCACACGCACCAAC
TCTCTTGGAGAGACGCGTCTCCACCCGTGCCTCCTCCCTCCCCTTCCTCT
CGACCGTACCCCGCCCCGCGGCCCCGGTCCACACTTTCGCGCAACTTTCG
CAGGCAAAAATCCTCAAGCTGCGGCGACATGACCAATCTACTCGTGCCAG
TCCTTGACTCCGCCTTATCCACCAACGGCTCCCCCTGCATCCCACGTGTG
CCAGCCCTATCTCAGCACTCCCGCAGCGACACCCATGACTCTCACGGCGC
TCCTACAGGCGATCTCCCCAGCCCCCGGGGCCTCGACAACCTTCCCAAGC
GTGCCAACGCACCGGACTACCTGGGCCGTGCTCGCGTTACGTCCGCAAAG
GTATCCCTCTTCTCGCCCCCCACCTCGTCCTCCTCCCTTGACCCGCCCTC
CCCCCCGCCCTCCCCCCCGCCCTCCTCCCCGTCCCGCAACCGGGCCAGTC
GGCTCAATGGCGAGAGGAAAGGCGGCAGCAGCCGTCACAAACGAGAACTC
CAGAAGGCATCCGTCGTCAACGAGCTCAGTCACGCGGCCGCCCTCCTCCT
TATCCCCTCCCTCCTCCCCCCTTCCTCTTCCCCTCCTTCCTCCTCCCCTC
CCCCCCTTCCCGACATGAGGGTTCTTCAGGACCTAGTCCATGCCGTCCGC
CTCCACCTTTCTCGCTTCCCCCTCCGCTATTGTCTGGCGGTGGAGGCACG
TGAGGTCCTCCAACACATGTCGCTCCTCCAACAAGCTACCCGGACTGACC
GCGTTGCCATCCATGTGGAGGAGCAGCCTTGGGGAGACA
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Synonyms
Publications