rna9291, rna9291 (mRNA) Nannochloropsis gaditana

Overview
Namerna9291
Unique Namerna9291
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1499
Alignment locationKK037252.1:296235..296856 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100466g1.1606.mrna
Orig protein idgnl|cribi|Naga_100466g1.1606
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:296235..296856 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100466g1gene9009Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9291rna9291-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21410.1cds9261Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9291 ID=rna9291|Name=rna9291|organism=Nannochloropsis gaditana|type=mRNA|length=1499bp
AATGCACAGGGACGAAATTGTACAGGCTCTATCGTTCTCCGGATTTTTGA
ACCGCAGGCGGCATGCTCCTGCGCGTGCGAAGCAAAATGGGCACATGGCG
TGTGGAAGGCGTGGAGCCAGGTACGACAATAAAGGCACTCCGCAGCCGCA
TTTTATCGGAGCATGGCGTCTCTCCACACCCTTCCCAGGTTTTTAGCCTT
GATCCGGCAGGGAAGCGGGTGATGGACGACGAACAGACGGTGAAATCGTT
CAATTTGCAGCATGGCGATCTGGTGCATTTGGCCATCCGAGAGGAGGATT
GTGCGCATGAGGCTGGGAAGAAAATTGCAGCCGATGGAAGTATTGTGAAT
AAGACACATTTGGAGGCGTCGCGTGTGAAAGGTTTTCGACCGGGGATGAT
GTCCTTGCGTAGCATGAAAATGCATTGGACACTCACTGATTTTGTGGAGC
TTGACGCTCAATTCGAGTACAAGATCAAGGCTCAAAAGAACGAGACCCCA
TGGTGCACTAAAGCCATCATGGAACCAATCTGCGGCAACGACTTTCAGTC
TTACATGCGCCGCGTGGGGTTCAACCAGTGCCGCATGGGCTACCTCTATG
GCCAGTTCACCGAAGCGAAGGAGGCGAAGGTGGAAGTGTTGTACGAACCA
CCTCAAGAAAGCACGCACGAAGGCTTCGAGCTGTTGGAAGACCCTCGGGC
CGAGAAAGTGGAGGCCTTGGCCGCCGCCTTGGGTCTGGTCCGAGTCGGAT
GGATCTTTGCGCACCCTCCCCGGGAGGAAGGCTTCGTCTTCTCGGGCTTG
GAGGTGATGCAGGCTGCCATGGGCCAATTGGAGGCGGCAGACGGGGTGAA
GGAGACGCCGTTCGTGACGGTGCGGGTCTCCCTGGCCCCGGTGGAGAAGG
CAGGGGGCGAGGACGGGAAGGAGGGCGGGAAGGAGGAAGTAGCGACGGTG
GCGCATTTCGACGCCTTCCAGGTAAGCCTCCAGTGCATGGAGATGGTGGC
CGAAGGCGCGATCGAGCCGGGGCCGGAGCCCGGGGCCATGCTCGTCAACG
AATCCTTCACCGCCATTGTGGAGGGAAAACCCGCGCCCACGGTGGATGTG
AATTTTTTCCTGGTCAACGTGCCCGTGGGGAGCGCGGAGAGCAGCCTTCT
CACCCACCGCTTCCCCAAGGCCAACCGCTTGGACGAGCTTCCGAGTGCCG
CCGCCATGGCGGCCCAGCTGGGGGAGGCCGGGAAGGCGGGGTGGCGTTTC
ATCGACTTGATGAGCGACTTCCACCTGCTCTTGTTCCTGACCGACTTTTT
GGGCATGGAGGAGGTCGCGGTCCTGTGTCGGAGCGTGCGGGAGAAGGAGA
CGGTGCCCTTGGGGGCGGGGCACGTGGACTTGCTCCGGGCGATCGCGGGG
ATGGAGTAGAGAGGGAGGGAGGGAAGGAGGGAGGGCGGGCGGGCGAACAT
AGAAAGGAGGGGAGACGAACACCGCAAGAAATGAAAGATATTAACGCGC
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protein sequence of rna9291

>rna9291-protein ID=rna9291-protein|Name=rna9291|organism=Nannochloropsis gaditana|type=polypeptide|length=66bp
MAPDRAIVRYGRPTRHARRNDGHESKLGQPGCRNSGLSRRARVQAFPPRM
LPARRLQQDQDRSGAV
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mRNA from alignment at KK037252.1:296235..296856-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9291 ID=rna9291|Name=rna9291|organism=Nannochloropsis gaditana|type=mRNA|length=622bp|location=Sequence derived from alignment at KK037252.1:296235..296856- (Nannochloropsis gaditana)
ACCTTACAGGCAACGGTTTTACGGGGATCCAACTTCCAGCCCTGGGTGTG
TTGGGCTTGAGCATTCCAAAGGCTTTTCTCCCTTGTCCTTGACTGGACTT
TCCTAGGCGTAGCAGAATCGAAGCGTTGCTATCAATCGCACGGAGGGAAG
CATGGGCAAATGGCACCGGACCGGGCCATTGTCAGGTATGGACGCCCAAC
GCGCCATGCTCGACGAAATGATGGGCATGAATCGAAACTTGGACAACCCG
GATGCCGAAATTCAGGATTATCGCGACGAGGTGCGTCCTCTCTCGCTTTT
TTCTTCATCCTTGCCTCGTATCCCTCCTACTTCCGTGCGTTAAAGGCCTT
TGGTAGCCGTGGGGACTGCCTTTTGGGTTTCTTTTCGGTGCCTTGCGTCG
TGGCCTTCTTCTCCTTTCTCGTATGCCCGCTCTTTCCCTCCTTTTCTGAC
GTCCCGAGCCTCTCTTGTCCATACCTCAGCGCGTGTGCAAGCATTTCCTC
CTCGGATGCTGCCCGCACGACGTCTTCAGCAAGACCAAGATCGATCTGGG
GCAGTGTGAAGGCATGCACGATGAGGCACTCCAAGAACGCTTCCAGGCCG
ACGTGAAGAAAGAGGAGGAGGA
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Coding sequence (CDS) from alignment at KK037252.1:296235..296856-

>rna9291 ID=rna9291|Name=rna9291|organism=Nannochloropsis gaditana|type=CDS|length=402bp|location=Sequence derived from alignment at KK037252.1:296235..296856- (Nannochloropsis gaditana)
CGCGTGTGCAAGCATTTCCTCCTCGGATGCTGCCCGCACGACGTCTTCAG
CAAGACCAAGATCGATCTGGGGCAGTGTGAATGGCACCGGACCGGGCCAT
TGTCAGGTATGGACGCCCAACGCGCCATGCTCGACGAAATGATGGGCATG
AATCGAAACTTGGACAACCCGGATGCCGAAATTCAGGATTATCGCGACGA
GCGCGTGTGCAAGCATTTCCTCCTCGGATGCTGCCCGCACGACGTCTTCA
GCAAGACCAAGATCGATCTGGGGCAGTGTGAATGGCACCGGACCGGGCCA
TTGTCAGGTATGGACGCCCAACGCGCCATGCTCGACGAAATGATGGGCAT
GAATCGAAACTTGGACAACCCGGATGCCGAAATTCAGGATTATCGCGACG
AG
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Synonyms
Publications