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Properties
| Property Name | Value |
|---|
| Product | putative palmitoyltransferase zdhhc11 |
| Orig transcript id | gnl|cribi|Naga_100019g19.516.mrna |
| Orig protein id | gnl|cribi|Naga_100019g19.516 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:205383..206700 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9251 ID=rna9251|Name=rna9251|organism=Nannochloropsis gaditana|type=mRNA|length=1147bp
ATTGTGCAAATGTGCAAGTTACATAAAAAAATAAGTCTTTGGTTCGAATG
CAACCATGAGTCAATTGTAGGTGCTTTTGTATGATTTCTTGAGCACACTA
ACAGAACACGCATGCCATATCTCGCACAGACCACGAAGACAAAGAAATCT
TGTGAGGATGGGAGAAGCTGCTGTTGGTGCACACGGTATCATTATGATCG
TCGCGTTCCTCTTCATGACACAACTAGCTGAGGCGATAGCATGGTGGGCA
TCCAACAAGACAAATATGCGGACCAACTACTTTAAAGTCATCGAGCATGG
ATCCAGACTTTGGAACGCCCACAGAGGTCTGAACACGCTGGCCTTCATCC
TAGGCCTTGTTGGAATGATCATAATTTTGAGCGCCGAAGAGTTCAAAGAG
GCGATGGGCTCCAAGGAGAGGCACGTCATTTACGGATTCTCGATGATAGT
TGCCCTGTTCGTGCACATCCTCTTTCGAGTGGCGTATCCGGATGACAAAA
CAAAGTGGGTACACCGGTGGTTCGGGCGTGCTATCAACCTGTGGGCGTTC
TTCGTGACCTTTACCGGGTACGAGCTCGCCAATTACGGTTCAAACGAAGG
AACCGATGCTGGAGGAGAAGATTTTGACAACATTGTTATCATTTTTTGCT
TCTGGGTCATCTTGAAGTTCGGCATATGGGTCTTCTACCTGATTCTTCGT
AGGCGCGGCAAGGCACAAAAATACGACAGCGTTGGCGCGGCTGAAGGAAT
TCAACTTCCTACTACCAATGCGATTGAGGTTGGCTCTCCACCGGCTTCTC
TGTAACAGACAAGCTGCCATCCACTTTCGTTTTCTGTGCGCACAAGTGCC
CTTGTTTGGGATGAAAAGCAACCCGAAAGCATTTGATATGGCTTTAAGAA
GTCTGTTTTTATGTTGACCTGGAAAGGACATGAAGAAAAGAGCAAGATCG
CGTGCGTTCATTGCTTTTTGAACACATTTGAAGTTATAAATATGGAACAA
TTAAGTAATTCTACCCTCACCGATGTGTGGGGGCTGGAAAAAAACGGCGA
CAGGATGCTGCTACCAACGGAAAGCGCCGTCGTCGGATCGAACACTGACT
TTTCGAGGGGGAAAATAAAGCAACGTAGAGTACGAAACTTCAAGCCT back to topprotein sequence of rna9251 >rna9251-protein ID=rna9251-protein|Name=rna9251|organism=Nannochloropsis gaditana|type=polypeptide|length=354bp
MARRRHGLEHPLGTLQMLAWGAFLFTAASFLLIMPSRFNPYSFALPSILG
FCLLLTLIAGIYTTLIDPCDEALLRMAPCDKESHDVLDRSVDQQQQEQQQ
ERVYCYICQASVGRGTAHCRQCNKCIAGFDQHCAWLNTCIGQRNYLPFIC
TLWCAFSVTILQASMSFVILVQWMAYGSNARIFSSITLPVKVYIFLTVIV
GTSSSIISFLLGQMLLFHLFLSIHEMTSYQYVILQSQRERSHEEREAANR
ELVKMMKTKHSTDAVVSASSSLPPSESSSPTEPPCTASSLSSRWRFPKEI
VLSRLPPALPSPRGLSFLSKRDVAPSSLPGDVFLAADEEDDEGMRDDDAV
VIHF back to topmRNA from alignment at KK037252.1:205383..206700+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9251 ID=rna9251|Name=rna9251|organism=Nannochloropsis gaditana|type=mRNA|length=1318bp|location=Sequence derived from alignment at KK037252.1:205383..206700+ (Nannochloropsis gaditana)
TCAACGGTTCGCAACGGTCTCGAGGCTACGTTCCACTCACCTGATATCTA
ATCACTTTGTATAGTCTTACAATAGATATGGCCCGACGTCGGCATGGACT
CGAGCACCCGCTTGGTACATTACAAATGCTGGCATGGGGAGCCTTTCTGT
TCACAGCAGCAAGCTTCTTATTGATCATGCCTTCCCGCTTCAATCCGTAT
TCGTTCGCATTACCTTCTATCCTAGGATTTTGTTTGCTGTTGACCCTGAT
TGCAGGTATCTATACCACACTTATTGACCCATGCGATGAGGCTCTTTTAC
GTATGGCGCCATGTGATAAGGAAAGTCATGACGTACTCGATCGAAGTGTT
GATCAACAGCaacaagagcagcagcaagagagAGTGTACTGCTACATTTG
CCAAGCAAGCGTTGGCAGAGGAACGGCGCATTGTAGACAGTGCAACAAGT
GTATAGCAGGCTTTGATCAACATTGTGCATGGCTTAACACGTGTATCGGG
CAGCGAAACTATCTTCCTTTTATCTGCACGCTGTGGTGTGCCTTCTCGGT
GACAATCCTTCAGGCCAGCATGAGCTTTGTTATTCTTGTACAATGGATGG
CTTACGGATCAAATGCCCGTATATTTTCATCTATCACGCTTCCCGTGAAA
GTTTACATTTTTTTAACTGTGATTGTAGGAACCTCATCTTCTATCATAAG
CTTCTTGCTTGGGCAGATGCTCCTATTCCACCTGTTCTTATCTATTCACG
AGATGACGAGCTATCAGTACGTAATCCTTCAGAGCCAACGGGAGCGGAGC
CacgaagagagagaagcggCAAATCGCGAACTCGTGAAAATGATGAAAAC
AAAGCATTCTACGGACGCGGTCGTAAGTGCATCCTCGTCACTACCACCAT
CAGAGTCTTCTTCACCTACAGAGCCTCCATGTACAGCATCGTCTCTGTCC
TCGCGTTGGCGATTCCCTAAAGAAATTGTCCTGTCACGGCTACCACCGGC
ATTACCCTCGCCACGAGGCCTCAGCTTCTTGTCCAAGAGGGACGTGGCCC
CGTCCAGTCTGCCGGGAGACGTGTTTTtggcggcggacgaggaagatgac
GAGGGGATGAGAGACGATGACGCGGTTGTCATCCACTTTTGAACATTAAA
TCGAAATACGACTAAACGCAATGTAAAAAGCCCATTGGAGCGCGCAGGAA
CTTGCCAGAAATTTACTTATTCTATCAGTCGTCGAGTCCTGAGACAGGAG
GCCGCTCAAGAAGCAGCCAAtttcttgtcttcctcagCCACATCTTTAGA
AAGGATCTCATAACACTC back to topCoding sequence (CDS) from alignment at KK037252.1:205383..206700+ >rna9251 ID=rna9251|Name=rna9251|organism=Nannochloropsis gaditana|type=CDS|length=1065bp|location=Sequence derived from alignment at KK037252.1:205383..206700+ (Nannochloropsis gaditana)
ATGGCCCGACGTCGGCATGGACTCGAGCACCCGCTTGGTACATTACAAAT
GCTGGCATGGGGAGCCTTTCTGTTCACAGCAGCAAGCTTCTTATTGATCA
TGCCTTCCCGCTTCAATCCGTATTCGTTCGCATTACCTTCTATCCTAGGA
TTTTGTTTGCTGTTGACCCTGATTGCAGGTATCTATACCACACTTATTGA
CCCATGCGATGAGGCTCTTTTACGTATGGCGCCATGTGATAAGGAAAGTC
ATGACGTACTCGATCGAAGTGTTGATCAACAGCaacaagagcagcagcaa
gagagAGTGTACTGCTACATTTGCCAAGCAAGCGTTGGCAGAGGAACGGC
GCATTGTAGACAGTGCAACAAGTGTATAGCAGGCTTTGATCAACATTGTG
CATGGCTTAACACGTGTATCGGGCAGCGAAACTATCTTCCTTTTATCTGC
ACGCTGTGGTGTGCCTTCTCGGTGACAATCCTTCAGGCCAGCATGAGCTT
TGTTATTCTTGTACAATGGATGGCTTACGGATCAAATGCCCGTATATTTT
CATCTATCACGCTTCCCGTGAAAGTTTACATTTTTTTAACTGTGATTGTA
GGAACCTCATCTTCTATCATAAGCTTCTTGCTTGGGCAGATGCTCCTATT
CCACCTGTTCTTATCTATTCACGAGATGACGAGCTATCAGTACGTAATCC
TTCAGAGCCAACGGGAGCGGAGCCacgaagagagagaagcggCAAATCGC
GAACTCGTGAAAATGATGAAAACAAAGCATTCTACGGACGCGGTCGTAAG
TGCATCCTCGTCACTACCACCATCAGAGTCTTCTTCACCTACAGAGCCTC
CATGTACAGCATCGTCTCTGTCCTCGCGTTGGCGATTCCCTAAAGAAATT
GTCCTGTCACGGCTACCACCGGCATTACCCTCGCCACGAGGCCTCAGCTT
CTTGTCCAAGAGGGACGTGGCCCCGTCCAGTCTGCCGGGAGACGTGTTTT
tggcggcggacgaggaagatgacGAGGGGATGAGAGACGATGACGCGGTT
GTCATCCACTTTTGA back to top
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