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Properties
Property Name | Value |
Product | n-ethylmaleimide-sensitive fusion protein |
Orig transcript id | gnl|cribi|Naga_100019g25.534.mrna |
Orig protein id | gnl|cribi|Naga_100019g25.534 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KK037252.1 | supercontig | KK037252.1:189398..192258 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9246 ID=rna9246|Name=rna9246|organism=Nannochloropsis gaditana|type=mRNA|length=1928bp GGTGACATAGAGATGGGGCAGTCGAAAGACCATGACATGTTGCCGGCCCA TTAGCGTAACGCTGATCGAGTCCCAAATTAATACATTTAAATGGGACCTG CGAGTTAAGACTCATGCTATATCTTTTTCAAACCGTACATGGACAATTGA AGAAGATCGAGAGGCTAAACAGGAGACATTTACATGTGAGCGGCTGATGA AAATCGTGCAGGCCTCCGTGACTATGTACACGAATTCAACTGAATTTGGT GGGATCTGTTCTCAAACTTTCTCATTTTTATGCAGCACAAGCACGACAGG AACACTTCGGTAAGAGAGAACCCTAATTCACAAAAGAGGTCATCTTAAAC CTCTTTTTCGCCATCTTTGGCGGGGCAGGCCAGCCAAATACGATGCATTC CATCTTTGGGGGCATGAAGCGGGCGGACACCTGCAAGTATGTGGCGCTTT TGGTCTTAGTTCTCCAGAACTCTGCGGTAGTTCTGACTGTGCGCTACTCA CGGATGAGGAAGGATGTAATGTACATTTCTAGCACGGCCGTGGTCATGTC AGAGATTGTGAAGCTCGTCGTAGCTTCGTTCCTGGTCGGCATGGAGGAAG GGGGCTTGTGTGGGCTGGGCAGTAAACTCTACCATGACATAGTGCTGAAA CCTGCCGATTTTGCGAAACTTCTGGTCCCTGCATTCCTTTTCACGATTCA AAACAATTTGTTATTCGTCGCGCTTTCAAACTTGGATGCCGCTAGCTTTC AAGTACTCTACCAGCTCAAAATATTGACCACGGCTGTCTTCTCCGTTGTC CTCCTTAACCGGCAACTAACCTGCAGACAATGGCTGTCTCTATTGGTCTT AATAGTCGGGGTCTCTCTCGTTCAAACGTCGGGTTTGAAAGACGGAAGCA CGTCGAGTACGGCTGGCAGAAACGGCAGCACGTCACTTGGATTCGTCTGC GTATTACTGGCTAGCTGCTCGAGCGGGTTCGCGGGAACCTATTTTGAGAA GGTTCTGAAGGACTCCGAGATCTCCGTGTGGGTGCGAAACGTGGAGCTGG CCCTGATCGGTATCCCTGTGGGCGTCTTTGGCGTTTGGTACACAGATGGG GCCGCCGTGCGCGAGGCCGGCTTTTTCTCTGGCTACAGCCCGCTCGTCTG GTCCGTGGTCGGGCTCCAGGCCGTGGGCGGTATTGCCATTGCTTTGGTGG TCAAGTACGCGGACTCAGTCCTCAAGAACTTCTCTACGTCCGTTTCCATT GTTGTCTCCTGCCTGGTGTCCTACGTGGTCTTCGGGGAGACCGACCTCTC CCCTCAATTTCTGGCTGGTGTCAGCTTGGTCATGTACTCCACCTTTTTGT ACGGCACAAGCTCTTCTGGGATGTGCTGCCTCTCCGAGGGTGGTTCTTTT ACCCCAAATAAGGGCGTGGCTAGGAAGGAAAGCAATAAGGTCTGGTCTGT GGCCTGCTGCGCCAAGCAAGCTGCGAGTACACGTGATGACCCTCTCGCAA GCGTCCCGTTCCTGGAATCTGCGGACAAGGAAAACCGTCAGAGGAAGGAT TGCGAGTCTCATGGCAATAAATCTAATAGGGTCAGTGCATCCGTCGCATG ATGAGAGTGCCGTAGAAATGCTGAGAGGAAAGGCGCGTTATCGTACCCAC TATCCGTCTCCTAACCTCTCAAGGGGGCTACGATAGTTTTGACGCGAGAC AGCCAGTGATGAACGGAACAGTCGCTAATGTAATGGTATCAACAGTTGCT CGTGGTATCTTGGGAACGATTTATGAGCTTTTCTTCATGTGTTAGGAGGC GATACAATTACTTTATAAGCTTTTGATATCATTGATTCGCCTCCAGAGCA TCCAGTCACTTTTATTTGCTCTTTCCAAAAACGATGGGATGCTATGAAGT CAAATTCAGGCCTCGTTGCGAGCGTGTT back to topprotein sequence of rna9246 >rna9246-protein ID=rna9246-protein|Name=rna9246|organism=Nannochloropsis gaditana|type=polypeptide|length=772bp MPISVPLDDATPAAAAPSTCAQLPSGHRVSQKGAHNDRNTMDLAVGQQPS NSLAYTNRVYVSHPDWEFLLSRVGNPEASKIEDDALLITVNGLVFAVSPN KGIETGNIGLNSLQRRFGVFTLTQRVKVDIFESNAGLALTSVIVRVDLLA KGKVKSPLLLATEEMAGAFKAAFLSQVLQTQQPVAWDFRGTKLELIIESF QNLIPGGNCPNAGQLLQPTDVVFTKEKGAMVALSGANSGAPRDNIINPDF DFGKLGIGGLGNEFNQIFRRAFASRVFPGHIVKQLGINHVRGMLLWGPPG CGKTLIARTIGKILNAREPKIVNGPEVLDKYVGGSEERIRELFKDAEKEQ QEMGDGSGLHVIIFDEIDAICKSRGSSRDSTGVSDSIVNQLLSKIDGVNS LNNILVIGMTNRKDMIDEAVLRPGRLEVHVEIGLPDEEGRLQIISIHTKS MREHKRIAPEAVGKLAELARATKNYSGAEIEGLVKSAASFAFQRNVNVKD LSQLKEEELIVEWADFQRALLEVPPRLGANSEELEVLFRNGIVPYGSSFD AIMMTLRRFVQQVRVSDRTPLLSVLLEGAPSTGKTAIAASLGVQSEFPFV RVVSADAMVGFSETAKCSAILKAFQDSSRSPLSVIVLDDLERLIDYSPIG PRFSNTVVQTLLVLLKKPPTSPDKRLLVIGTTSVAAHLEDLQLVQGFNVM LTVPQLTGPEEIKTVLREVVTSLSQKEMDDITSAISQPIGIKQLLMVTEM ARQGEETVSTDRFLECLHICGF back to topmRNA from alignment at KK037252.1:189398..192258+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9246 ID=rna9246|Name=rna9246|organism=Nannochloropsis gaditana|type=mRNA|length=2861bp|location=Sequence derived from alignment at KK037252.1:189398..192258+ (Nannochloropsis gaditana) GACTCGATCAGCGTTACGCTAATGGGCCGGCAACATGTCATGGTCTTTCG
ACTGCCCCATCTCTATGTCACCTCCAGAGGGGGCCGTTGATtgcaaaaaa
aaaagagctCAATTTGAGACAGGTGTAAGCTTTGCAATCGACTCCCACTT
GGCAGCGACCTAAtaagggcggggagagtgGTGATGTCTAAATTCACGTT
TTGCAGGCATGCCCATTTCGGTGCCCCTCGATGACGCTACCCCCGCCGCG
GCGGCCCCCTCCACTTGCGCTCAACTCCCTTCAGGTCACAGAGTTTCACA
AAAAGGGGCTCACAACGACAGAAACACGATGGATCTCGCTGTGGGCCAAC
AGCCTAGCAACAGTTTGGCGTACACGAATCGGTGAGTCCCTTAATAATTC
TGCAGACATGCAAGGAAGCCCATCCTCATTCTACTTCtctgctcctctcc
catgTAGGGTATATGTAAGCCACCCCGATTGGGAgttccttctttctcgc
gTAGGCAACCCTGAGGCCAGCAAGATTGAGGACGACGCGCTGCTCATAAC
AGTAAATGGACTGGTTTTTGCGGTCAGTCCAAATAAGGGCATCGAGACTG
GGAACATAGGCCTGAACTCGTTGCAACGACGTTTCGGTGTTTTTACGCTG
ACCCAGCGCGTCAAAGTGGACATTTTCGAGAGTAATGCTGGTCTAGCACT
TACCTCTGTAATAGTCCGTGTGGACCTCTTGGCAAAAGGTAAAGTCAAGT
CGCCCTTGCTGCTAGccacggaggaaatggccgGGGCCTTCAAGGCCGCC
TTTCTTTCGCAGGTCTTACAGACGCAGCAGCCCGTGGCATGGGATTTTCG
TGGCACGAAGCTGGAATTGATCATAGAGAGCTTTCAAAATCTGATACCGG
GTGGAAACTGCCCCAACGCTGGGCAGCTCTTGCAGCCCACGGATGTCGTC
TTcacgaaggagaaaggcgccATGGTGGCCCTGTCCGGCGCCAATTCGGG
CGCCCCCCGCGACAACATCATCAACCCAGATTTTGATTTTGGGAAGCTAG
GTATCGGAGGTCTTGGGAACGAGTTCAATCAAATTTTTCGTCGGGCCTTC
GCGTCGCGCGTCTTTCCCGGGCACATCGTCAAGCAACTCGGGATCAACCA
CGTGCGGGGCATGTTGCTTTGGGGCCCACCAGGCTGCGGCAAGACCCTCA
TCGCGCGTACCATCGGAAAGATTCTGAATGCGCGCGAGCCCAAGATCGTG
AATGGGCCCGAGGTCCTTGACAAATACGTGGGCGGGTCGGAGGAGCGGAT
CCGGGAGCTTTTCaaggacgcggagaaggagcagcaggaaaTGGGGGACG
GTAGTGGCTTGCACGTGATTATTTTCGATGAGATTGACGCCATTTGCAAG
TCTCGTGGCTCCAGCCGCGACAGCACTGGCGTTTCGGACTCGATTGTGAA
CCAGTTGCTCTCTAAGATCGACGGCGTGAATTCTCTGAACAACATCCTGG
TCATAGGGATGACGAACAGAAAGGACATGATCGACGAGGCAGTTTTGCGT
CCCGGTCGGCTGGAGGTGCACGTGGAGATCGGGCTtcctgacgaggaggg
ccgCCTGCAGATCATATCTATCCACACAAAAAGCATGCGGGAGCATAAAC
GCATCGCGCCCGAGGCCGTGGGAAAACTTGCGGAGCTCGCACGCGCCACC
AAGAACTACTCCGGCGCCGAAATTGAAGGCTTAGTCAAGTCGGCGGCCTC
ATTCGCCTTCCAGCGCAACGTGAACGTGAAGGACCTGTCTCAGCttaagg
aggaggagctgataGTGGAGTGGGCGGACTTTCAGCGGGCCCTCTTGGAG
GTCCCTCCCCGTTTAGGGGCCAACTCGGAGGAGCTTGAGGTTTTGTTTCG
GAATGGCATCGTCCCGTACGGCTCCTCTTTCGACGCGATCATGATGACCC
TGCGCCGCTTCGTCCAGCAAGTCCGGGTCTCGGACCGGACGCCCCTCCTG
TCTGTCTTGCTTGAGGGCGCTCCCAGCACGGGGAAGACGGCGATTGCCGC
CTCTTTGGGCGTGCAGAGCGAGTTTCCCTTCGTGAGGGTCGTATCGGCGG
ATGCCATGGTCGGCTTCTCGGAGACCGCCAAGTGCTCGGCCATCCTGAAG
GCTTTCCAGGACAGCTCCCGCTCGCCCCTCTCCGTGATCGTCCTCGACGA
TCTGGAGCGGCTCATCGACTACTCCCCCATCGGCCCACGGTTCTCTAACA
CGGTGGTGCAGACCTTGCTGGTGCTTCTGAAGAAgccgcccacctccccg
gaCAAGCGCTTGCTCGTGATCGGCACGACCTCGGTGGCGGCCCATCTCGA
GGACCTGCAGCTCGTCCAGGGCTTCAACGTGATGCTGACCGTGCCCCAGC
TGACGGGCCCGGAGGAGATCAAGACGGTCCTACGGGAGGTGGTCACCTCC
CTGTCGcagaaggagatggatgaTATCACGTCAGCGATCAGCCAGCCAAT
AGGGATCAAGCAGCTCTTGATGGTGACGGAGATggcgaggcaaggagagg
agaccgTCTCGACCGATAGATTCTTGGAGTGCCTGCACATTTGTGGGTTc
tgagatgggaaggagaagaggaattATCCAAGTGTGGAGAGGACGGGTAT
TGAGTTGCAGGCGCGCCGAGCGATGATGGTGGAGATGATGGGAGTGGAGG
GCTATGTAAAAAAAAAGTCAAAAAGCACCTTAAGAGCGCGACGGGAGAGA
CCGACGCTTTATCCTCCAAGTTTAGGATCGCGAAATTGGCTTTGTGAAAT
TTGGCCTTTTTGCATTTTTTGTACGGAATTGATTTCAAAGCAAAAGAAGT
TAGATTTGATA back to topCoding sequence (CDS) from alignment at KK037252.1:189398..192258+ >rna9246 ID=rna9246|Name=rna9246|organism=Nannochloropsis gaditana|type=CDS|length=4638bp|location=Sequence derived from alignment at KK037252.1:189398..192258+ (Nannochloropsis gaditana) ATGCCCATTTCGGTGCCCCTCGATGACGCTACCCCCGCCGCGGCGGCCCC CTCCACTTGCGCTCAACTCCCTTCAGGTCACAGAGTTTCACAAAAAGGGG CTCACAACGACAGAAACACGATGGATCTCGCTGTGGGCCAACAGCCTAGC AACAGTTTGGCGTACACGAATCGGGTATATGTAAGCCACCCCGATTGGGA gttccttctttctcgcgTAGGCAACCCTGAGGCCAGCAAGATTGAGGACG ACGCGCTGCTCATAACAGTAAATGGACTGGTTTTTGCGGTCAGTCCAAAT AAGGGCATCGAGACTGGGAACATAGGCCTGAACTCGTTGCAACGACGTTT CGGTGTTTTTACGCTGACCCAGCGCGTCAAAGTGGACATTTTCGAGAGTA ATGCTGGTCTAGCACTTACCTCTGTAATAGTCCGTGTGGACCTCTTGGCA AAAGGTAAAGTCAAGTCGCCCTTGCTGCTAGccacggaggaaatggccgG GGCCTTCAAGGCCGCCTTTCTTTCGCAGGTCTTACAGACGCAGCAGCCCG TGGCATGGGATTTTCGTGGCACGAAGCTGGAATTGATCATAGAGAGCTTT CAAAATCTGATACCGGGTGGAAACTGCCCCAACGCTGGGCAGCTCTTGCA GCCCACGGATGTCGTCTTcacgaaggagaaaggcgccATGGTGGCCCTGT CCGGCGCCAATTCGGGCGCCCCCCGCGACAACATCATCAACCCAGATTTT GATTTTGGGAAGCTAGGTATCGGAGGTCTTGGGAACGAGTTCAATCAAAT TTTTCGTCGGGCCTTCGCGTCGCGCGTCTTTCCCGGGCACATCGTCAAGC AACTCGGGATCAACCACGTGCGGGGCATGTTGCTTTGGGGCCCACCAGGC TGCGGCAAGACCCTCATCGCGCGTACCATCGGAAAGATTCTGAATGCGCG CGAGCCCAAGATCGTGAATGGGCCCGAGGTCCTTGACAAATACGTGGGCG GGTCGGAGGAGCGGATCCGGGAGCTTTTCaaggacgcggagaaggagcag caggaaaTGGGGGACGGTAGTGGCTTGCACGTGATTATTTTCGATGAGAT TGACGCCATTTGCAAGTCTCGTGGCTCCAGCCGCGACAGCACTGGCGTTT CGGACTCGATTGTGAACCAGTTGCTCTCTAAGATCGACGGCGTGAATTCT CTGAACAACATCCTGGTCATAGGGATGACGAACAGAAAGGACATGATCGA CGAGGCAGTTTTGCGTCCCGGTCGGCTGGAGGTGCACGTGGAGATCGGGC TtcctgacgaggagggccgCCTGCAGATCATATCTATCCACACAAAAAGC ATGCGGGAGCATAAACGCATCGCGCCCGAGGCCGTGGGAAAACTTGCGGA GCTCGCACGCGCCACCAAGAACTACTCCGGCGCCGAAATTGAAGGCTTAG TCAAGTCGGCGGCCTCATTCGCCTTCCAGCGCAACGTGAACGTGAAGGAC CTGTCTCAGCttaaggaggaggagctgataGTGGAGTGGGCGGACTTTCA GCGGGCCCTCTTGGAGGTCCCTCCCCGTTTAGGGGCCAACTCGGAGGAGC TTGAGGTTTTGTTTCGGAATGGCATCGTCCCGTACGGCTCCTCTTTCGAC GCGATCATGATGACCCTGCGCCGCTTCGTCCAGCAAGTCCGGGTCTCGGA CCGGACGCCCCTCCTGTCTGTCTTGCTTGAGGGCGCTCCCAGCACGGGGA AGACGGCGATTGCCGCCTCTTTGGGCGTGCAGAGCGAGTTTCCCTTCGTG AGGGTCGTATCGGCGGATGCCATGGTCGGCTTCTCGGAGACCGCCAAGTG CTCGGCCATCCTGAAGGCTTTCCAGGACAGCTCCCGCTCGCCCCTCTCCG TGATCGTCCTCGACGATCTGGAGCGGCTCATCGACTACTCCCCCATCGGC CCACGGTTCTCTAACACGGTGGTGCAGACCTTGCTGGTGCTTCTGAAGAA gccgcccacctccccggaCAAGCGCTTGCTCGTGATCGGCACGACCTCGG TGGCGGCCCATCTCGAGGACCTGCAGCTCGTCCAGGGCTTCAACGTGATG CTGACCGTGCCCCAGCTGACGGGCCCGGAGGAGATCAAGACGGTCCTACG GGAGGTGGTCACCTCCCTGTCGcagaaggagatggatgaTATCACGTCAG CGATCAGCCAGCCAATAGGGATCAAGCAGCTCTTGATGGTGACGGAGATg gcgaggcaaggagaggagaccgTCTCGACCGATAGATTCTTGGAGTGCCT GCACATTTGTGGGTTctgaATGCCCATTTCGGTGCCCCTCGATGACGCTA CCCCCGCCGCGGCGGCCCCCTCCACTTGCGCTCAACTCCCTTCAGGTCAC AGAGTTTCACAAAAAGGGGCTCACAACGACAGAAACACGATGGATCTCGC TGTGGGCCAACAGCCTAGCAACAGTTTGGCGTACACGAATCGGGTATATG TAAGCCACCCCGATTGGGAgttccttctttctcgcgTAGGCAACCCTGAG GCCAGCAAGATTGAGGACGACGCGCTGCTCATAACAGTAAATGGACTGGT TTTTGCGGTCAGTCCAAATAAGGGCATCGAGACTGGGAACATAGGCCTGA ACTCGTTGCAACGACGTTTCGGTGTTTTTACGCTGACCCAGCGCGTCAAA GTGGACATTTTCGAGAGTAATGCTGGTCTAGCACTTACCTCTGTAATAGT CCGTGTGGACCTCTTGGCAAAAGGTAAAGTCAAGTCGCCCTTGCTGCTAG ccacggaggaaatggccgGGGCCTTCAAGGCCGCCTTTCTTTCGCAGGTC TTACAGACGCAGCAGCCCGTGGCATGGGATTTTCGTGGCACGAAGCTGGA ATTGATCATAGAGAGCTTTCAAAATCTGATACCGGGTGGAAACTGCCCCA ACGCTGGGCAGCTCTTGCAGCCCACGGATGTCGTCTTcacgaaggagaaa ggcgccATGGTGGCCCTGTCCGGCGCCAATTCGGGCGCCCCCCGCGACAA CATCATCAACCCAGATTTTGATTTTGGGAAGCTAGGTATCGGAGGTCTTG GGAACGAGTTCAATCAAATTTTTCGTCGGGCCTTCGCGTCGCGCGTCTTT CCCGGGCACATCGTCAAGCAACTCGGGATCAACCACGTGCGGGGCATGTT GCTTTGGGGCCCACCAGGCTGCGGCAAGACCCTCATCGCGCGTACCATCG GAAAGATTCTGAATGCGCGCGAGCCCAAGATCGTGAATGGGCCCGAGGTC CTTGACAAATACGTGGGCGGGTCGGAGGAGCGGATCCGGGAGCTTTTCaa ggacgcggagaaggagcagcaggaaaTGGGGGACGGTAGTGGCTTGCACG TGATTATTTTCGATGAGATTGACGCCATTTGCAAGTCTCGTGGCTCCAGC CGCGACAGCACTGGCGTTTCGGACTCGATTGTGAACCAGTTGCTCTCTAA GATCGACGGCGTGAATTCTCTGAACAACATCCTGGTCATAGGGATGACGA ACAGAAAGGACATGATCGACGAGGCAGTTTTGCGTCCCGGTCGGCTGGAG GTGCACGTGGAGATCGGGCTtcctgacgaggagggccgCCTGCAGATCAT ATCTATCCACACAAAAAGCATGCGGGAGCATAAACGCATCGCGCCCGAGG CCGTGGGAAAACTTGCGGAGCTCGCACGCGCCACCAAGAACTACTCCGGC GCCGAAATTGAAGGCTTAGTCAAGTCGGCGGCCTCATTCGCCTTCCAGCG CAACGTGAACGTGAAGGACCTGTCTCAGCttaaggaggaggagctgataG TGGAGTGGGCGGACTTTCAGCGGGCCCTCTTGGAGGTCCCTCCCCGTTTA GGGGCCAACTCGGAGGAGCTTGAGGTTTTGTTTCGGAATGGCATCGTCCC GTACGGCTCCTCTTTCGACGCGATCATGATGACCCTGCGCCGCTTCGTCC AGCAAGTCCGGGTCTCGGACCGGACGCCCCTCCTGTCTGTCTTGCTTGAG GGCGCTCCCAGCACGGGGAAGACGGCGATTGCCGCCTCTTTGGGCGTGCA GAGCGAGTTTCCCTTCGTGAGGGTCGTATCGGCGGATGCCATGGTCGGCT TCTCGGAGACCGCCAAGTGCTCGGCCATCCTGAAGGCTTTCCAGGACAGC TCCCGCTCGCCCCTCTCCGTGATCGTCCTCGACGATCTGGAGCGGCTCAT CGACTACTCCCCCATCGGCCCACGGTTCTCTAACACGGTGGTGCAGACCT TGCTGGTGCTTCTGAAGAAgccgcccacctccccggaCAAGCGCTTGCTC GTGATCGGCACGACCTCGGTGGCGGCCCATCTCGAGGACCTGCAGCTCGT CCAGGGCTTCAACGTGATGCTGACCGTGCCCCAGCTGACGGGCCCGGAGG AGATCAAGACGGTCCTACGGGAGGTGGTCACCTCCCTGTCGcagaaggag atggatgaTATCACGTCAGCGATCAGCCAGCCAATAGGGATCAAGCAGCT CTTGATGGTGACGGAGATggcgaggcaaggagaggagaccgTCTCGACCG ATAGATTCTTGGAGTGCCTGCACATTTGTGGGTTctga back to top
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