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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100022g36.860.mrna |
| Orig protein id | gnl|cribi|Naga_100022g36.860 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:736201..738057 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna923 ID=rna923|Name=rna923|organism=Nannochloropsis gaditana|type=mRNA|length=396bp
ATGCAGTGCCTGACTCCTAGCAAGCCGTGCTCACGAGATTTTGAGGCGAT
TAAGAGAGGTGGGAAGCTTTTAGGAGCAACTCAAGTGTCCAACCATGTTT
GTGATCGACCGACTGCGCAGATCTTCTGGGGAGGGCAGCCGCCCATGCTG
GTTACACCGCGATATTTTTTGGAGTTATACGCCTCATCTATATGGCTAAA
AATTCCGGGGGGAAAGAGTAAAGTCAAGGAGATCAGACGACCTCCAGGCT
GCTCGACGAAAGAGACCGTACACCCCTCCGGACAAGTGATTACAAAAAGA
TTTATGCCTACATTATCACGCCAAATGGGTCAAGTGTTGAGGCATAGTCC
ATATGGAAGATGGCGGGAATTGTGCACCCCGGAAAGTTTGCATTAG back to topprotein sequence of rna923 >rna923-protein ID=rna923-protein|Name=rna923|organism=Nannochloropsis gaditana|type=polypeptide|length=402bp
MGHFPWGAPHSHVMRAAFFLALLLLQDLGEGHPSSPVGKALDQPFLARRR
EIRVQRQRVSNSGGRQTRGKTHGDAKLHRRRIDQGQKERESSAAAAMPDQ
EPRVEEEDLLEEAIRERSINKYFAADPLWTGQLVASALAWALVLAAASLP
PDIGRDRPILRVLAARHALGLAADVRRVLLVAADGAVNRRRIHELVGGLT
SVPGAPAYLLYTAALLAWPATDSPKGVVNGLAPLLLREFFTALAAVLDLL
QILGVSSEAASGPGSAARCGPRRPMPGSLSTISLLLEASLGLSLAVALLR
CRNQGGTLLRRCLAALLFANFLYNRIGHISGLKEAICRRSVGGSALALLK
PIWKDMEPATRQLTAVSRATLARLDTIPGGERVRSMLQLLGFLEDDAETK
EA back to topmRNA from alignment at CM002456.1:736201..738057+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna923 ID=rna923|Name=rna923|organism=Nannochloropsis gaditana|type=mRNA|length=1857bp|location=Sequence derived from alignment at CM002456.1:736201..738057+ (Nannochloropsis gaditana)
ATGGGTCATTTTCCTTGGGGCGCACCACACTCGCATGTTATGCGCGCAGC
TTTCTTTCTGGCTCTCCTCCTATTGCAGGACTTGGGGGAAGGCCACCCGT
CATCACCGGTAGGAAAAGCATTAGATCAACCTTTCCTCgcgcgacggagg
gaaaTCAGGGTCCAGCGTCAGAGAGTGTCGAattcaggagggaggcagac
aCGCGGCAAAACCCATGGAGATGCCAAACTCCACCGGCGACGGATTGATC
AAGGCCAAAAGGAGCGGGAGTCTAGTGCAGCTGCAGCCATGCCGGACCAG
GAGCcacgggtggaggaggaggacttgtTAGAAGAGGCTATACGTGAACG
CTCTATCAATAAATACTTTGCAGCGGATCCTTTATGGACGGGTCAGCTTG
TGGCGAGCGCTTTGGCATGGGCTCTGGTGGTACGTTACTCGCCAGAATTC
ATTGGCAGCCTTACCAGTGCTGACGACCTACCTGTGCCTTCGCAATTTAT
AaatcttctttctcttcttcttttgtaTAATCTTATGAGAACATGCTTCT
TTTCACAAGCTGTGGGATGCTGTCAGAGGATTTCGATTCTTTTAATCGTG
TGCTCGACGATATAGCATTTACGGCATTCAAATTCCCCTTTAAAGACGTG
TCGTGCTGTAAGTAAACGCGTTTCCACAATGTTCACTCTTGCCATGATAC
GCTTTCATCATCAGCTGGCTGCGGCCTCTTTGCCTCCGGACATTGGCAGA
GACCGCCCGATCCTACGTGTGCTGGCTGCCAGGCACGCCCTTGGCCTAGC
GGCGGACGTGCGCCGCGTGCTCTTGGTGGCGGCGGATGGCGCTGTCAATA
GAAGAAGGATTCACGAGGTATCAGGAGAGATGGAGTGTAGTAGAGAGATG
GGGCGAGTGTGGAGGTAAAGCGTGacggcgaggagaagaggccaGGCAGG
TGTGCGGGCGGACATTTATGCGCTGTATCTCAAGAGCATGCGACAGAATG
TTGTATGGCTCATTAACAAACATGACTCGTTACATTTACGCAGCTCGTTG
GCGGCCTGACAAGCGTTCCCGGGGCTCCTGCCTATCTGCTCTACACAGCC
GCACTGCTCGCATGGCCCGCGACTGACTCGCCTAAGGGGGTAGTTAACGG
CCTCgcgccgctccttctccgtgAATTTTTCACGGCCTTAGCAGCAGTTC
TGGATTTGCTTCAGATTTTAGGTGTGTCCTCGGAGGCTGCCTCAGGGCCT
GGCTCCGCTGCTCGCTGTGGACCGCGGAGGCCCATGCCTGGTTCACTCTC
TACCATTAGCTTGCTGCTTGAGGTGCGTTGTGGCAAGAATGACTAGAGTG
TAATGCATCAAAAGCAGTTATCGTTTTTGAAATTTTTTATCGTCATTCTT
TCACAGGCATCGCTGGGGCTGTCTTTGGCGGTGGCCCTCTTGCGGTGCAG
GAACCAAGGCGGTACGCTTTTGCGGCGGTGTTTGGCAGCGCTGCTCTTCG
CAAATTTCTTGTACAATCGAATTGGCCACATTTCTGGGCTTAAGGTGTGT
GTCATGAGGAGGCCTTTTCACGCTCTTTCTTGTCCAAAAGTATTTCCTTC
TTACATCGATTTTCCCGTCGGCTTTGCTTATGCATAATATCTATAAGGAG
GCGATTTGCCGACGTTCTGTTGGTGGCTCGGCTCTCGCTCTACTCAAGCC
TATATGGAAAGACATGGAACCTGCGACGCGTCAACTGACGGCCGTAAGTC
GAGCCACGCTTGCCCGCTTGGACACGATCCccgggggagaaagagtaAGA
TCCATGCTGCAGCTTCTCGGCTTTCTAGAAGACGATGCAGAGACAAAGGA
GGCATAA back to topCoding sequence (CDS) from alignment at CM002456.1:736201..738057+ >rna923 ID=rna923|Name=rna923|organism=Nannochloropsis gaditana|type=CDS|length=6045bp|location=Sequence derived from alignment at CM002456.1:736201..738057+ (Nannochloropsis gaditana)
ATGGGTCATTTTCCTTGGGGCGCACCACACTCGCATGTTATGCGCGCAGC
TTTCTTTCTGGCTCTCCTCCTATTGCAGGACTTGGGGGAAGGCCACCCGT
CATCACCGGTAGGAAAAGCATTAGATCAACCTTTCCTCgcgcgacggagg
gaaaTCAGGGTCCAGCGTCAGAGAGTGTCGAattcaggagggaggcagac
aCGCGGCAAAACCCATGGAGATGCCAAACTCCACCGGCGACGGATTGATC
AAGGCCAAAAGGAGCGGGAGTCTAGTGCAGCTGCAGCCATGCCGGACCAG
GAGCcacgggtggaggaggaggacttgtTAGAAGAGGCTATACGTGAACG
CTCTATCAATAAATACTTTGCAGCGGATCCTTTATGGACGGGTCAGCTTG
TGGCGAGCGCTTTGGCATGGGCTCTGGTGCTGGCTGCGGCCTCTTTGCCT
CCGGACATTGGCAGAGACCGCCCGATCCTACGTGTGCTGGCTGCCAGGCA
CGCCCTTGGCCTAGCGGCGGACGTGCGCCGCGTGCTCTTGGTGGCGGCGG
ATGGCGCTGTCAATAGAAGAAGGATTCACGAGCTCGTTGGCGGCCTGACA
AGCGTTCCCGGGGCTCCTGCCTATCTGCTCTACACAGCCGCACTGCTCGC
ATGGCCCGCGACTGACTCGCCTAAGGGGGTAGTTAACGGCCTCgcgccgc
tccttctccgtgAATTTTTCACGGCCTTAGCAGCAGTTCTGGATTTGCTT
CAGATTTTAGGTGTGTCCTCGGAGGCTGCCTCAGGGCCTGGCTCCGCTGC
TCGCTGTGGACCGCGGAGGCCCATGCCTGGTTCACTCTCTACCATTAGCT
TGCTGCTTGAGGCATCGCTGGGGCTGTCTTTGGCGGTGGCCCTCTTGCGG
TGCAGGAACCAAGGCGGTACGCTTTTGCGGCGGTGTTTGGCAGCGCTGCT
CTTCGCAAATTTCTTGTACAATCGAATTGGCCACATTTCTGGGCTTAAGG
AGGCGATTTGCCGACGTTCTGTTGGTGGCTCGGCTCTCGCTCTACTCAAG
CCTATATGGAAAGACATGGAACCTGCGACGCGTCAACTGACGGCCGTAAG
TCGAGCCACGCTTGCCCGCTTGGACACGATCCccgggggagaaagagtaA
GATCCATGCTGCAGCTTCTCGGCTTTCTAGAAGACGATGCAGAGACAAAG
GAGGCATAAATGGGTCATTTTCCTTGGGGCGCACCACACTCGCATGTTAT
GCGCGCAGCTTTCTTTCTGGCTCTCCTCCTATTGCAGGACTTGGGGGAAG
GCCACCCGTCATCACCGGTAGGAAAAGCATTAGATCAACCTTTCCTCgcg
cgacggagggaaaTCAGGGTCCAGCGTCAGAGAGTGTCGAattcaggagg
gaggcagacaCGCGGCAAAACCCATGGAGATGCCAAACTCCACCGGCGAC
GGATTGATCAAGGCCAAAAGGAGCGGGAGTCTAGTGCAGCTGCAGCCATG
CCGGACCAGGAGCcacgggtggaggaggaggacttgtTAGAAGAGGCTAT
ACGTGAACGCTCTATCAATAAATACTTTGCAGCGGATCCTTTATGGACGG
GTCAGCTTGTGGCGAGCGCTTTGGCATGGGCTCTGGTGCTGGCTGCGGCC
TCTTTGCCTCCGGACATTGGCAGAGACCGCCCGATCCTACGTGTGCTGGC
TGCCAGGCACGCCCTTGGCCTAGCGGCGGACGTGCGCCGCGTGCTCTTGG
TGGCGGCGGATGGCGCTGTCAATAGAAGAAGGATTCACGAGCTCGTTGGC
GGCCTGACAAGCGTTCCCGGGGCTCCTGCCTATCTGCTCTACACAGCCGC
ACTGCTCGCATGGCCCGCGACTGACTCGCCTAAGGGGGTAGTTAACGGCC
TCgcgccgctccttctccgtgAATTTTTCACGGCCTTAGCAGCAGTTCTG
GATTTGCTTCAGATTTTAGGTGTGTCCTCGGAGGCTGCCTCAGGGCCTGG
CTCCGCTGCTCGCTGTGGACCGCGGAGGCCCATGCCTGGTTCACTCTCTA
CCATTAGCTTGCTGCTTGAGGCATCGCTGGGGCTGTCTTTGGCGGTGGCC
CTCTTGCGGTGCAGGAACCAAGGCGGTACGCTTTTGCGGCGGTGTTTGGC
AGCGCTGCTCTTCGCAAATTTCTTGTACAATCGAATTGGCCACATTTCTG
GGCTTAAGGAGGCGATTTGCCGACGTTCTGTTGGTGGCTCGGCTCTCGCT
CTACTCAAGCCTATATGGAAAGACATGGAACCTGCGACGCGTCAACTGAC
GGCCGTAAGTCGAGCCACGCTTGCCCGCTTGGACACGATCCccgggggag
aaagagtaAGATCCATGCTGCAGCTTCTCGGCTTTCTAGAAGACGATGCA
GAGACAAAGGAGGCATAAATGGGTCATTTTCCTTGGGGCGCACCACACTC
GCATGTTATGCGCGCAGCTTTCTTTCTGGCTCTCCTCCTATTGCAGGACT
TGGGGGAAGGCCACCCGTCATCACCGGTAGGAAAAGCATTAGATCAACCT
TTCCTCgcgcgacggagggaaaTCAGGGTCCAGCGTCAGAGAGTGTCGAa
ttcaggagggaggcagacaCGCGGCAAAACCCATGGAGATGCCAAACTCC
ACCGGCGACGGATTGATCAAGGCCAAAAGGAGCGGGAGTCTAGTGCAGCT
GCAGCCATGCCGGACCAGGAGCcacgggtggaggaggaggacttgtTAGA
AGAGGCTATACGTGAACGCTCTATCAATAAATACTTTGCAGCGGATCCTT
TATGGACGGGTCAGCTTGTGGCGAGCGCTTTGGCATGGGCTCTGGTGCTG
GCTGCGGCCTCTTTGCCTCCGGACATTGGCAGAGACCGCCCGATCCTACG
TGTGCTGGCTGCCAGGCACGCCCTTGGCCTAGCGGCGGACGTGCGCCGCG
TGCTCTTGGTGGCGGCGGATGGCGCTGTCAATAGAAGAAGGATTCACGAG
CTCGTTGGCGGCCTGACAAGCGTTCCCGGGGCTCCTGCCTATCTGCTCTA
CACAGCCGCACTGCTCGCATGGCCCGCGACTGACTCGCCTAAGGGGGTAG
TTAACGGCCTCgcgccgctccttctccgtgAATTTTTCACGGCCTTAGCA
GCAGTTCTGGATTTGCTTCAGATTTTAGGTGTGTCCTCGGAGGCTGCCTC
AGGGCCTGGCTCCGCTGCTCGCTGTGGACCGCGGAGGCCCATGCCTGGTT
CACTCTCTACCATTAGCTTGCTGCTTGAGGCATCGCTGGGGCTGTCTTTG
GCGGTGGCCCTCTTGCGGTGCAGGAACCAAGGCGGTACGCTTTTGCGGCG
GTGTTTGGCAGCGCTGCTCTTCGCAAATTTCTTGTACAATCGAATTGGCC
ACATTTCTGGGCTTAAGGAGGCGATTTGCCGACGTTCTGTTGGTGGCTCG
GCTCTCGCTCTACTCAAGCCTATATGGAAAGACATGGAACCTGCGACGCG
TCAACTGACGGCCGTAAGTCGAGCCACGCTTGCCCGCTTGGACACGATCC
ccgggggagaaagagtaAGATCCATGCTGCAGCTTCTCGGCTTTCTAGAA
GACGATGCAGAGACAAAGGAGGCATAAATGGGTCATTTTCCTTGGGGCGC
ACCACACTCGCATGTTATGCGCGCAGCTTTCTTTCTGGCTCTCCTCCTAT
TGCAGGACTTGGGGGAAGGCCACCCGTCATCACCGGTAGGAAAAGCATTA
GATCAACCTTTCCTCgcgcgacggagggaaaTCAGGGTCCAGCGTCAGAG
AGTGTCGAattcaggagggaggcagacaCGCGGCAAAACCCATGGAGATG
CCAAACTCCACCGGCGACGGATTGATCAAGGCCAAAAGGAGCGGGAGTCT
AGTGCAGCTGCAGCCATGCCGGACCAGGAGCcacgggtggaggaggagga
cttgtTAGAAGAGGCTATACGTGAACGCTCTATCAATAAATACTTTGCAG
CGGATCCTTTATGGACGGGTCAGCTTGTGGCGAGCGCTTTGGCATGGGCT
CTGGTGCTGGCTGCGGCCTCTTTGCCTCCGGACATTGGCAGAGACCGCCC
GATCCTACGTGTGCTGGCTGCCAGGCACGCCCTTGGCCTAGCGGCGGACG
TGCGCCGCGTGCTCTTGGTGGCGGCGGATGGCGCTGTCAATAGAAGAAGG
ATTCACGAGCTCGTTGGCGGCCTGACAAGCGTTCCCGGGGCTCCTGCCTA
TCTGCTCTACACAGCCGCACTGCTCGCATGGCCCGCGACTGACTCGCCTA
AGGGGGTAGTTAACGGCCTCgcgccgctccttctccgtgAATTTTTCACG
GCCTTAGCAGCAGTTCTGGATTTGCTTCAGATTTTAGGTGTGTCCTCGGA
GGCTGCCTCAGGGCCTGGCTCCGCTGCTCGCTGTGGACCGCGGAGGCCCA
TGCCTGGTTCACTCTCTACCATTAGCTTGCTGCTTGAGGCATCGCTGGGG
CTGTCTTTGGCGGTGGCCCTCTTGCGGTGCAGGAACCAAGGCGGTACGCT
TTTGCGGCGGTGTTTGGCAGCGCTGCTCTTCGCAAATTTCTTGTACAATC
GAATTGGCCACATTTCTGGGCTTAAGGAGGCGATTTGCCGACGTTCTGTT
GGTGGCTCGGCTCTCGCTCTACTCAAGCCTATATGGAAAGACATGGAACC
TGCGACGCGTCAACTGACGGCCGTAAGTCGAGCCACGCTTGCCCGCTTGG
ACACGATCCccgggggagaaagagtaAGATCCATGCTGCAGCTTCTCGGC
TTTCTAGAAGACGATGCAGAGACAAAGGAGGCATAAATGGGTCATTTTCC
TTGGGGCGCACCACACTCGCATGTTATGCGCGCAGCTTTCTTTCTGGCTC
TCCTCCTATTGCAGGACTTGGGGGAAGGCCACCCGTCATCACCGGTAGGA
AAAGCATTAGATCAACCTTTCCTCgcgcgacggagggaaaTCAGGGTCCA
GCGTCAGAGAGTGTCGAattcaggagggaggcagacaCGCGGCAAAACCC
ATGGAGATGCCAAACTCCACCGGCGACGGATTGATCAAGGCCAAAAGGAG
CGGGAGTCTAGTGCAGCTGCAGCCATGCCGGACCAGGAGCcacgggtgga
ggaggaggacttgtTAGAAGAGGCTATACGTGAACGCTCTATCAATAAAT
ACTTTGCAGCGGATCCTTTATGGACGGGTCAGCTTGTGGCGAGCGCTTTG
GCATGGGCTCTGGTGCTGGCTGCGGCCTCTTTGCCTCCGGACATTGGCAG
AGACCGCCCGATCCTACGTGTGCTGGCTGCCAGGCACGCCCTTGGCCTAG
CGGCGGACGTGCGCCGCGTGCTCTTGGTGGCGGCGGATGGCGCTGTCAAT
AGAAGAAGGATTCACGAGCTCGTTGGCGGCCTGACAAGCGTTCCCGGGGC
TCCTGCCTATCTGCTCTACACAGCCGCACTGCTCGCATGGCCCGCGACTG
ACTCGCCTAAGGGGGTAGTTAACGGCCTCgcgccgctccttctccgtgAA
TTTTTCACGGCCTTAGCAGCAGTTCTGGATTTGCTTCAGATTTTAGGTGT
GTCCTCGGAGGCTGCCTCAGGGCCTGGCTCCGCTGCTCGCTGTGGACCGC
GGAGGCCCATGCCTGGTTCACTCTCTACCATTAGCTTGCTGCTTGAGGCA
TCGCTGGGGCTGTCTTTGGCGGTGGCCCTCTTGCGGTGCAGGAACCAAGG
CGGTACGCTTTTGCGGCGGTGTTTGGCAGCGCTGCTCTTCGCAAATTTCT
TGTACAATCGAATTGGCCACATTTCTGGGCTTAAGGAGGCGATTTGCCGA
CGTTCTGTTGGTGGCTCGGCTCTCGCTCTACTCAAGCCTATATGGAAAGA
CATGGAACCTGCGACGCGTCAACTGACGGCCGTAAGTCGAGCCACGCTTG
CCCGCTTGGACACGATCCccgggggagaaagagtaAGATCCATGCTGCAG
CTTCTCGGCTTTCTAGAAGACGATGCAGAGACAAAGGAGGCATAA back to top
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