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Properties
Property Name | Value |
Product | signal peptide peptidase family protein |
Orig transcript id | gnl|cribi|Naga_100019g45.532.mrna |
Orig protein id | gnl|cribi|Naga_100019g45.532 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KK037252.1 | supercontig | KK037252.1:143310..145529 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9227 ID=rna9227|Name=rna9227|organism=Nannochloropsis gaditana|type=mRNA|length=2116bp CGACGGTCGAACGGTCAGCAAGCAATGTATCTTGCCATCTTCTCGGTTTT CGAAAAGAGGTATAAGAACAGCAGCTTTGCAAAGCGTAACGGGACTGGTA GCACGACTCCTGTTATACGCCATGGCATCATTTCTCACGAAGCTCCCACC AAAACTCGATGGAGTTGTAAGACTGGAAGCTGACGCTTGTGGACAACATT GGACATTTTGTTGTGATTGTGCATGGCCAACCTTCTGGGAGGCACAAACA AAGGCCTCGATCAGTGCATCCATCCCGTTTGGCCTGTGAGCTACTTCGTA TCGTGTAGGGAGAGAGCGAGGAAACATGACCGTAGTGAAAGGGCTAGCAA GCATATGGGAGGCTGTATCAACCCAAACCTCACCCGTCCAGAGCACAGAT TGCCATCACTATTTCCATGGGATTATCAAAATGAAATACACTCAAGCAAA GAAGGACTGTATACCTGTTAAGCGGGGTCGCACAGGTTAATTGAGTTCGG TGGCTTGAACGCAGGGTCTTAAGTGCGTGAGTCACGGGGTGCAGCGACCC GAAGGAGGGACACAAGGATACCAAGGCCACGTCCATGGATAAAGCCGTAG GCCTTCCTTGCACCCGGAGTTGTAGCAAATGTTTCTGATTTACTCATATT TTCCAATTCACACTGCAGGGAGCGAGACAATTGTTGAGTTCGCTTTTGGG CTGACGAGGAGTTAAGGGGTCGGGGAAGCATTAGCCATGCCCGGACAGCA TGGAAGCTCCGCCACACTTGCGCGCTTTGTCATCCTGTTGATTTTCCCAT ATGAAATTCAGGGATTCATTACGGCACCTATGGATGGCCAAGGGTTTTAT GCCCATCGTCAGGACCCTTATTCCTATTTCCTCCCCCCCTCCTCCTGTTC CCCTTCCTCCCGCCATCCCCTCATCACTTTCCTGTCATCTTCTTCTTCCT CGTCCTCTGCGTCTTCTTCACCTTCTTCATCTTTTCCCACTGCATCTTCG TCATCTCCTACTTCTGGAGACGAAGCGTTCCAAAAAAAAAAGAAAACCTA AAAAAGACACTTCGGAGAGAATACGCCTCTTTCTTCGCACCCATGGAGAG AGACATGTACCGGCCAGATGTCGAGTTCGTTGATCCTCTCACAAGATTAC GGGGCGTTGATTCATATCAACGAAATGTGGACATGCTGGGCTCACGCACC CTCTTGGGTGGAATCCTCTTCAGCGACGCTGGTATCGTGCTGCATAATAT CGAGGATCTGGGACCTCGTAAATTATTAACGCGCTGGACCTTGCGTTTGC GTGCTAAGGTCCTACCTTGGGGGCCAATGGCGCGCTTTACAGGTGTCTCT TTGTATGACCTAGACGAGCAGGCGCGCGTGGTGAGGCAGACGGACTACTG GGACAGCATCAACCTTGTGGAAGGGGAGTATCGGCCAGCGCCTCTGCTGA CAGGCCTCAAGGACTTCTTAAAGCAGCTGGCACCGGGTGCGGGGGGAGCT CAACAGGCTATGAATGCGGAACTTCCTTTCGAGCTACTGCGTCGGGCACC TGAGTACGAGGTAAGGAGATACCCGGCCTTCGAGGCAGTCGAGACAAACT ACAACACACGCCCTGAAGGCTATGACCGCCTAGGTACATACGCGTCGGGA TGGAATGTCGAAAATCGTAAATTCAAGCCTTTTAGTCCGTCTATCATGCG CATCGACAAGAACGAGAAAGATAAGACCATGATGTGGCCCGTGGGGTTTA GCAACGAAGACCTGGATCAGGTGGGGGGCGTGGTGTCGTCACAGGCCATA CCCGCTCCTGCCGATGAAATCATCCGCCGTACCAGCGTACCTGTTCAGGT TGTTGCTGTGCTGCGGTTTGAGGTGCCGGCCACAGCGCCCGTAGTGAAGT ATTATGCGAGCAGGCTGGTCGAGCTTCTTGCTGCCGACGAGTTAGTTCCC ACCCCAGCAGCAGCGCAAACCTACACTCTCTGTCAGTATGATGCCATATT TTCCGTTGGCACTCGCCGAAATGAGGTATGGGCCGTGCTGGAGAAGCATG ACTGGCAAATTTGATGTCTGTGAGTGAAAGAAAGAAAAGAATATCTGTAC GATCCTGTACTACTTT back to topprotein sequence of rna9227 >rna9227-protein ID=rna9227-protein|Name=rna9227|organism=Nannochloropsis gaditana|type=polypeptide|length=491bp MNATTMPQSPSGDWRVSLLEVKGLGSTVDMVELQLEGKTSTFDVKPPAET GEGPLKVAKTFYLYGHGHDHTTPLTIALKHGDSTLCTASLPHDKAETTED WIVLMDAGGRAAGKILVRTQWVSKIYVTPTSTNYILPAAYVLLFGLWSMS NVVLIPVTFNLLATSLAIIYIGCHRSLQLRDKGAMSDEDQLETISKEDAY KFPLIGSCVLFGLYAAFKFFDKDWVNWLLAVYFSIIGAAMLTCTFEPPAA YVLRSSASYGVGPFSLPLLGKMDLRFTQAELAAGVVAVALAGCWFQSKHW MLNNGFGIAFCIQGLERISLGSYKVGAILLTGLFFYDIFWVFGTEVMVTV AKSFDAPIKLLFPRVLATASTKAQHSMLGLGDIVIPGIFIALLLRYDAER KSVSPRASPSAAFSKPFFHVCFLAYGLGLGTTIFVMNYFKAAQPALLYLV PACLLSSFGTALALKEFKALLAYNEEEDEHASVKNEDQKND back to topmRNA from alignment at KK037252.1:143310..145529+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9227 ID=rna9227|Name=rna9227|organism=Nannochloropsis gaditana|type=mRNA|length=2220bp|location=Sequence derived from alignment at KK037252.1:143310..145529+ (Nannochloropsis gaditana) ACACCACAGGCGCATCTGATTCGAATTGTGTCATAGCTGTACTCTCAATG
AACGCTACCACGATGCCGCAGTCCCCCTCTGGCGACTGGCGGGTCTCCTT
GCTTGAGGTGAAAGGCCTGGGAAGCACCGTCGACATGGTTGAGTTGCagc
tggagggaaagacgagcACATTTGATGTCAAACCCCCCGCAGAGACTGGA
GAAGGGGTGAGTTGTACCTACTATGAGGGATTGGATGCTGTTGTTGTAGT
ACAGTCGGTATAAGACAGACCTGGCGATTGAACATCTGTGCTCACCTCGG
CACTTTCACGTCCTCTGCCTAACCCTCCCAGCCTCTCAAAGTGGCAAAGA
CTTTCTACCTGTACGGGCACGGACATGACCACACTACGCCCCTCACTATC
GCACTCAAGGTTTGTGATGGGTCCGTATGATCGGCATCTCTTGGACTAGT
TTTAACCCGTCTTGATGCTAACAAGTTGCTCGTCGAACCATCTTAACAGC
ATGGAGATAGCACACTGTGCACGGCGAGTCTCCCCCACGACAAGGCGGAA
ACAACAGAGGATGTACGTATTCAGTTAAAACATTTAAAATTGCAACTTAC
AGGCGGGATTGATTGAGATGTTGTTTCGGGTTTTGCGCTGGCCGTAAGCC
TTGACTGACACTTTGAGGACATGATTAGCCCATTATCTTCAAAGGACTTT
GTTGATCAAATATGAATGTCCAAGATTGAAAGCTGATTTGTATTTCTTTC
ACAATTTTTTTATGGCAATTGCAAAAGTGGATCGTCTTGATGGATGCTGG
CGGGAGAGCGGCTGGGAAGATACTGGTTCGCACGCAATGGGTTTCTAAAA
TCTACGTGACACCCACCAGCACAAACTACATACTACCAGCGGCCTATGTG
TTGCTTTTTGGGCTCTGGTCGATGTCCAATGTGGTGCTGATTCCGGTCAC
CTTCAACCTGTTGGCGACATCCCTGGCGATCATCTACATCGGTTGTCACA
GGTCGTTGCAGCTCCGAGACAAGGGTGCCATGTCGGACGAGGACCAGCTC
GAGACCATTTCAAAGGAGGATGCCTACAAGTTCCCGTTGATCGGATCGTG
CGTGCTTTTCGGTCTTTACGCGGCTTTTAAATTCTTTGACAAGGACTGGG
TAAATTGGCTGCTTGCAGTCTACTTCTCCATCATTGGCGCCGCCATGCTG
ACGTGCACCTTTgagccccccgccgcctACGTTCTGCGATCCTCAGCTTC
ATACGGTGTGGGACCTTTTTCACTTCCACTTCTGGGCAAGATGGATTTGC
GCTTCACGCAGGCCGAGCTGGCTGCAGGCGTAGTGGCAGTAGCGCTAGCC
GGGTGTTGGTTCCAGTCGAAGCACTGGATGCTGAACAACGGCTTCGGTAT
CGCGTTTTGTATTCAAGGACTGGAGCGCATCTCTTTGGGATCTTACAAAG
TCGGCGCCATACTGCTGACCGGGCTTTTCTTTTATGacattttttgggtt
ttTGGAACTGAAGTCATGGTCACCGTAGCCAAATCCTTCGATGCGCCCAT
CAagcttctctttcctcgcgTGCTAGCGACTGCTTCCACGAAGGCTCAGC
ACTCTATGCTCGGGCTCGGCGATATCGTGATTCCTGGCATATTCATTGCC
CTTCTCTTACGTTACGACGCGGAGCGTAAATCTGTATCACCCCGCGCCag
tccctccgccgccttctccaaacCCTTTTTCCATGTATGCTTTCTGGCGT
ACGGACTAGGCCTAGGGACGACCATATTCGTCATGAACTACTTCAAAGCA
GCTCAACCCGCCCTACTCTACTTGGTGCCCGCTTGTCTTCTTTCCTCGTT
CGGGACAGCCCTCGCCCTGAAGGAATTTAAGGCTTTACTTGCTTAcaatg
aagaagaggacgaacATGCTTCGGTAAAGAATGAGGACCAAAAAAATGAT
TGAGGGATAAGCAGAAATGTAGCGCAATacaagagcaggagaagTGTCCC
TCACAAAGCATGCGCCCGTTAAGCGCCTCGATTCACCTGCATCTTAATGA
CTGCTATGTCGAAGGGTAGGCCCTGTAAAAGGGGTGCACGGGATGTTGCA
ACATTTGATACCTTCCGGAGTAAAAACAACCAAGGTTTGCAAGGTAAGAG
TAGAAACCTAAAAAGGCTTGTGGCGGACTGGAATAACAAAGAATAAGGAA
GAGTTATTTATTTAGCGTGC back to topCoding sequence (CDS) from alignment at KK037252.1:143310..145529+ >rna9227 ID=rna9227|Name=rna9227|organism=Nannochloropsis gaditana|type=CDS|length=5904bp|location=Sequence derived from alignment at KK037252.1:143310..145529+ (Nannochloropsis gaditana) ATGAACGCTACCACGATGCCGCAGTCCCCCTCTGGCGACTGGCGGGTCTC CTTGCTTGAGGTGAAAGGCCTGGGAAGCACCGTCGACATGGTTGAGTTGC agctggagggaaagacgagcACATTTGATGTCAAACCCCCCGCAGAGACT GGAGAAGGGCCTCTCAAAGTGGCAAAGACTTTCTACCTGTACGGGCACGG ACATGACCACACTACGCCCCTCACTATCGCACTCAAGCATGGAGATAGCA CACTGTGCACGGCGAGTCTCCCCCACGACAAGGCGGAAACAACAGAGGAT TGGATCGTCTTGATGGATGCTGGCGGGAGAGCGGCTGGGAAGATACTGGT TCGCACGCAATGGGTTTCTAAAATCTACGTGACACCCACCAGCACAAACT ACATACTACCAGCGGCCTATGTGTTGCTTTTTGGGCTCTGGTCGATGTCC AATGTGGTGCTGATTCCGGTCACCTTCAACCTGTTGGCGACATCCCTGGC GATCATCTACATCGGTTGTCACAGGTCGTTGCAGCTCCGAGACAAGGGTG CCATGTCGGACGAGGACCAGCTCGAGACCATTTCAAAGGAGGATGCCTAC AAGTTCCCGTTGATCGGATCGTGCGTGCTTTTCGGTCTTTACGCGGCTTT TAAATTCTTTGACAAGGACTGGGTAAATTGGCTGCTTGCAGTCTACTTCT CCATCATTGGCGCCGCCATGCTGACGTGCACCTTTgagccccccgccgcc tACGTTCTGCGATCCTCAGCTTCATACGGTGTGGGACCTTTTTCACTTCC ACTTCTGGGCAAGATGGATTTGCGCTTCACGCAGGCCGAGCTGGCTGCAG GCGTAGTGGCAGTAGCGCTAGCCGGGTGTTGGTTCCAGTCGAAGCACTGG ATGCTGAACAACGGCTTCGGTATCGCGTTTTGTATTCAAGGACTGGAGCG CATCTCTTTGGGATCTTACAAAGTCGGCGCCATACTGCTGACCGGGCTTT TCTTTTATGacattttttgggttttTGGAACTGAAGTCATGGTCACCGTA GCCAAATCCTTCGATGCGCCCATCAagcttctctttcctcgcgTGCTAGC GACTGCTTCCACGAAGGCTCAGCACTCTATGCTCGGGCTCGGCGATATCG TGATTCCTGGCATATTCATTGCCCTTCTCTTACGTTACGACGCGGAGCGT AAATCTGTATCACCCCGCGCCagtccctccgccgccttctccaaacCCTT TTTCCATGTATGCTTTCTGGCGTACGGACTAGGCCTAGGGACGACCATAT TCGTCATGAACTACTTCAAAGCAGCTCAACCCGCCCTACTCTACTTGGTG CCCGCTTGTCTTCTTTCCTCGTTCGGGACAGCCCTCGCCCTGAAGGAATT TAAGGCTTTACTTGCTTAcaatgaagaagaggacgaacATGCTTCGGTAA AGAATGAGGACCAAAAAAATGATTGAATGAACGCTACCACGATGCCGCAG TCCCCCTCTGGCGACTGGCGGGTCTCCTTGCTTGAGGTGAAAGGCCTGGG AAGCACCGTCGACATGGTTGAGTTGCagctggagggaaagacgagcACAT TTGATGTCAAACCCCCCGCAGAGACTGGAGAAGGGCCTCTCAAAGTGGCA AAGACTTTCTACCTGTACGGGCACGGACATGACCACACTACGCCCCTCAC TATCGCACTCAAGCATGGAGATAGCACACTGTGCACGGCGAGTCTCCCCC ACGACAAGGCGGAAACAACAGAGGATTGGATCGTCTTGATGGATGCTGGC GGGAGAGCGGCTGGGAAGATACTGGTTCGCACGCAATGGGTTTCTAAAAT CTACGTGACACCCACCAGCACAAACTACATACTACCAGCGGCCTATGTGT TGCTTTTTGGGCTCTGGTCGATGTCCAATGTGGTGCTGATTCCGGTCACC TTCAACCTGTTGGCGACATCCCTGGCGATCATCTACATCGGTTGTCACAG GTCGTTGCAGCTCCGAGACAAGGGTGCCATGTCGGACGAGGACCAGCTCG AGACCATTTCAAAGGAGGATGCCTACAAGTTCCCGTTGATCGGATCGTGC GTGCTTTTCGGTCTTTACGCGGCTTTTAAATTCTTTGACAAGGACTGGGT AAATTGGCTGCTTGCAGTCTACTTCTCCATCATTGGCGCCGCCATGCTGA CGTGCACCTTTgagccccccgccgcctACGTTCTGCGATCCTCAGCTTCA TACGGTGTGGGACCTTTTTCACTTCCACTTCTGGGCAAGATGGATTTGCG CTTCACGCAGGCCGAGCTGGCTGCAGGCGTAGTGGCAGTAGCGCTAGCCG GGTGTTGGTTCCAGTCGAAGCACTGGATGCTGAACAACGGCTTCGGTATC GCGTTTTGTATTCAAGGACTGGAGCGCATCTCTTTGGGATCTTACAAAGT CGGCGCCATACTGCTGACCGGGCTTTTCTTTTATGacattttttgggttt tTGGAACTGAAGTCATGGTCACCGTAGCCAAATCCTTCGATGCGCCCATC AagcttctctttcctcgcgTGCTAGCGACTGCTTCCACGAAGGCTCAGCA CTCTATGCTCGGGCTCGGCGATATCGTGATTCCTGGCATATTCATTGCCC TTCTCTTACGTTACGACGCGGAGCGTAAATCTGTATCACCCCGCGCCagt ccctccgccgccttctccaaacCCTTTTTCCATGTATGCTTTCTGGCGTA CGGACTAGGCCTAGGGACGACCATATTCGTCATGAACTACTTCAAAGCAG CTCAACCCGCCCTACTCTACTTGGTGCCCGCTTGTCTTCTTTCCTCGTTC GGGACAGCCCTCGCCCTGAAGGAATTTAAGGCTTTACTTGCTTAcaatga agaagaggacgaacATGCTTCGGTAAAGAATGAGGACCAAAAAAATGATT GAATGAACGCTACCACGATGCCGCAGTCCCCCTCTGGCGACTGGCGGGTC TCCTTGCTTGAGGTGAAAGGCCTGGGAAGCACCGTCGACATGGTTGAGTT GCagctggagggaaagacgagcACATTTGATGTCAAACCCCCCGCAGAGA CTGGAGAAGGGCCTCTCAAAGTGGCAAAGACTTTCTACCTGTACGGGCAC GGACATGACCACACTACGCCCCTCACTATCGCACTCAAGCATGGAGATAG CACACTGTGCACGGCGAGTCTCCCCCACGACAAGGCGGAAACAACAGAGG ATTGGATCGTCTTGATGGATGCTGGCGGGAGAGCGGCTGGGAAGATACTG GTTCGCACGCAATGGGTTTCTAAAATCTACGTGACACCCACCAGCACAAA CTACATACTACCAGCGGCCTATGTGTTGCTTTTTGGGCTCTGGTCGATGT CCAATGTGGTGCTGATTCCGGTCACCTTCAACCTGTTGGCGACATCCCTG GCGATCATCTACATCGGTTGTCACAGGTCGTTGCAGCTCCGAGACAAGGG TGCCATGTCGGACGAGGACCAGCTCGAGACCATTTCAAAGGAGGATGCCT ACAAGTTCCCGTTGATCGGATCGTGCGTGCTTTTCGGTCTTTACGCGGCT TTTAAATTCTTTGACAAGGACTGGGTAAATTGGCTGCTTGCAGTCTACTT CTCCATCATTGGCGCCGCCATGCTGACGTGCACCTTTgagccccccgccg cctACGTTCTGCGATCCTCAGCTTCATACGGTGTGGGACCTTTTTCACTT CCACTTCTGGGCAAGATGGATTTGCGCTTCACGCAGGCCGAGCTGGCTGC AGGCGTAGTGGCAGTAGCGCTAGCCGGGTGTTGGTTCCAGTCGAAGCACT GGATGCTGAACAACGGCTTCGGTATCGCGTTTTGTATTCAAGGACTGGAG CGCATCTCTTTGGGATCTTACAAAGTCGGCGCCATACTGCTGACCGGGCT TTTCTTTTATGacattttttgggttttTGGAACTGAAGTCATGGTCACCG TAGCCAAATCCTTCGATGCGCCCATCAagcttctctttcctcgcgTGCTA GCGACTGCTTCCACGAAGGCTCAGCACTCTATGCTCGGGCTCGGCGATAT CGTGATTCCTGGCATATTCATTGCCCTTCTCTTACGTTACGACGCGGAGC GTAAATCTGTATCACCCCGCGCCagtccctccgccgccttctccaaacCC TTTTTCCATGTATGCTTTCTGGCGTACGGACTAGGCCTAGGGACGACCAT ATTCGTCATGAACTACTTCAAAGCAGCTCAACCCGCCCTACTCTACTTGG TGCCCGCTTGTCTTCTTTCCTCGTTCGGGACAGCCCTCGCCCTGAAGGAA TTTAAGGCTTTACTTGCTTAcaatgaagaagaggacgaacATGCTTCGGT AAAGAATGAGGACCAAAAAAATGATTGAATGAACGCTACCACGATGCCGC AGTCCCCCTCTGGCGACTGGCGGGTCTCCTTGCTTGAGGTGAAAGGCCTG GGAAGCACCGTCGACATGGTTGAGTTGCagctggagggaaagacgagcAC ATTTGATGTCAAACCCCCCGCAGAGACTGGAGAAGGGCCTCTCAAAGTGG CAAAGACTTTCTACCTGTACGGGCACGGACATGACCACACTACGCCCCTC ACTATCGCACTCAAGCATGGAGATAGCACACTGTGCACGGCGAGTCTCCC CCACGACAAGGCGGAAACAACAGAGGATTGGATCGTCTTGATGGATGCTG GCGGGAGAGCGGCTGGGAAGATACTGGTTCGCACGCAATGGGTTTCTAAA ATCTACGTGACACCCACCAGCACAAACTACATACTACCAGCGGCCTATGT GTTGCTTTTTGGGCTCTGGTCGATGTCCAATGTGGTGCTGATTCCGGTCA CCTTCAACCTGTTGGCGACATCCCTGGCGATCATCTACATCGGTTGTCAC AGGTCGTTGCAGCTCCGAGACAAGGGTGCCATGTCGGACGAGGACCAGCT CGAGACCATTTCAAAGGAGGATGCCTACAAGTTCCCGTTGATCGGATCGT GCGTGCTTTTCGGTCTTTACGCGGCTTTTAAATTCTTTGACAAGGACTGG GTAAATTGGCTGCTTGCAGTCTACTTCTCCATCATTGGCGCCGCCATGCT GACGTGCACCTTTgagccccccgccgcctACGTTCTGCGATCCTCAGCTT CATACGGTGTGGGACCTTTTTCACTTCCACTTCTGGGCAAGATGGATTTG CGCTTCACGCAGGCCGAGCTGGCTGCAGGCGTAGTGGCAGTAGCGCTAGC CGGGTGTTGGTTCCAGTCGAAGCACTGGATGCTGAACAACGGCTTCGGTA TCGCGTTTTGTATTCAAGGACTGGAGCGCATCTCTTTGGGATCTTACAAA GTCGGCGCCATACTGCTGACCGGGCTTTTCTTTTATGacattttttgggt tttTGGAACTGAAGTCATGGTCACCGTAGCCAAATCCTTCGATGCGCCCA TCAagcttctctttcctcgcgTGCTAGCGACTGCTTCCACGAAGGCTCAG CACTCTATGCTCGGGCTCGGCGATATCGTGATTCCTGGCATATTCATTGC CCTTCTCTTACGTTACGACGCGGAGCGTAAATCTGTATCACCCCGCGCCa gtccctccgccgccttctccaaacCCTTTTTCCATGTATGCTTTCTGGCG TACGGACTAGGCCTAGGGACGACCATATTCGTCATGAACTACTTCAAAGC AGCTCAACCCGCCCTACTCTACTTGGTGCCCGCTTGTCTTCTTTCCTCGT TCGGGACAGCCCTCGCCCTGAAGGAATTTAAGGCTTTACTTGCTTAcaat gaagaagaggacgaacATGCTTCGGTAAAGAATGAGGACCAAAAAAATGA TTGA back to top
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