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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100019g50.527.mrna |
Orig protein id | gnl|cribi|Naga_100019g50.527 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KK037252.1 | supercontig | KK037252.1:132701..134367 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9220 ID=rna9220|Name=rna9220|organism=Nannochloropsis gaditana|type=mRNA|length=2231bp TACTGCATCTGTATAAAAATATGATCATATAATCCACTGGCATCATGCTA ACATTTTGTGAACTTAATTTGCGCATGCACAGCCGATAAATGTCACGATC TTTCCTGTGCAAGACAGCAAGGAAAACAATAGTGATCGTGGGTCATGCTT TACTGAGAATACCTCCGCCGTGGAAGTCTACTCTTGCAATTCTAGCCCTG TGCATCGTCAATTTACAGAGCACGGTAGCCTTTGTACCACCCCTGGTGGG GGCAGTTTTCACTCAAAGTGAAGACCTTCTGCCGGCAGCACCGCTGAAAG ACAGCAACAAGATCGCGAGCGCTTTTTTTGGAAGTCTAGGTTCCTTCACT AGAATACATTCCAAGTATTTCCCTTGTGGAACCAAGCCAAATATCAGAAT TGCAGCGCGCAGTAGTGTGCCCTCCAACGAAATGATGGAGGGAAACTTAC AAGAAAGACGTTATCAAATTATTGCGGCACCTGTATGCGAGCCTATGGCT CGTCGCCTTCAAATACAGTATCCGGAGCGCTTTCGTTTTCATCCTACCTA TTGGGGGAAGTTTCCGGATGGCACTGACAACATAGAAGTCGGTGGCTTCC AACCACACAATGTCATGGCAGGGGAACACGTGTTATTTCTGGCATCGTTC CACAACAACGACGTTACTCTCTCCCAATTTCAAGTTATGGTTATGCTTCT ACAAAGCTTTATCGAGAGTCTCACAATTGTGCTTCCATTTTATCCTGTCG GTACGATGGAACGAGTGAGTAAAGAAGGCCAGGTTGCCACGGCTAATACG TATGCGCAGATGTTCTCAAATCTGCCATCATGTGGTCGTCCAACTCGACT TCTCATCTACGACTTACACACGCTCCAAAACCGCTTCTACCTTCACGGTA ATTCTATCGCTAGTCTACAAACCACCATTCCTATCCTATTCGATGAAATT CGACAGGAAAAAATTGATTGTGTTGCCTTTCCAGATGACGGAGCTGCAAA ACGTTTTGCTCACATGTTTGCTCCATTAACCCTTGAACTGGTTACATGTG GAAAGACTCGAGACGGTGATAAGCGCGCCATCACGGTTCAAGATGGGAAC CCGAAAAATAAAAGGGTGTTAATTGTGGATGACCTCGTACAAACGGGGGG GACTCTTTACGAGTGTGGTGTAGCATTGAAAGCCCTAGGTGCTGCTTCTG TGTCAGCTTTCGTGGCCCACTCTGTTTTCCCAAATGAGTCCTGGAAGCGC TTTTCGCGTGGTGGGGACCGCAGCGTATTTGAAAAATTTTGGACTACCAA CTCGATACCAACTGTAACAAACAACCTTCCAAAGGAGGATGTGTTTGTTG TTTTAGATCTGTTGGAGAAAATTGTTTATGACCTAGATTTTCGGTAAAAA AATTAAAAAGGTGTTAATAGACCTTTACTAGTCGTTCATTTCATGGAAAA TCTTCCGAAGTCTGAGAAGGAAACGTACTCGGGCAAAACAAAATGAAAGA GAATGAAAGTGTAACTATGCACTAATGCAAGAAAGGAATTGTCATATAGG GTCTTCATAGCGGGCATAAATTGACGGTCCCTTGAAAATGTTTCAGATAG GGTTATCTTCATATGCATGGTATGAAGTCGAGGATTGCGTTATAATTTCC TGACAGACATGTGATGCTTTTGTAAGAACGTACGCAACCCGCATTTTGAA GAGCACGCGACTCCATCTACACATCGACTTGGCCGATAACAGTCGAAATT CGATTGCTCATATGTGATTAAGATATTTGACCATCCAGGTTGGCTGAAAG CAATGGATTAGAGCGGAAATATGTACTTTTCCTATCATAATTTAACTGAT TTTTGTTATATGATGATACTCAAGGGTATCAGAGGCCTTTCTATTATTCC GAGTTGCATAATCATAGATAAAAGCTTCGCTAGACTAGCTACCACACGAT GTTGCATCGTGCGGAGCAGAGACACTTTAGAGGTACAATCCATCAATTCT TGCCGCTTTTCATTGGCGTGGAATACTCCAAATTATACGCAGAGCTCAAA AGACGTCATCGATATTTTAATTTTACGCTCCACTTTTCTCGACTGCGTAC AACCATCAAGATTCAGTTACTGATTTTATCACATTTTTCTTTTCTTCCTT TGATAAGTTGTCATTTCTCCCCTTCTTCGCGAAAAGCAGAGTGAACCGTC TCTTGTTAATGAACGGTCTTTGCCTCATTCA back to topprotein sequence of rna9220 >rna9220-protein ID=rna9220-protein|Name=rna9220|organism=Nannochloropsis gaditana|type=polypeptide|length=477bp MIHAHFCMSFCTDLTEYTMKFCSHVLIMALAIAFLVHKTTEAVGNNGARS RLVSKLKREVAAKEFSSAKYHNAVLNKIEHKGNKEWSAVGGKEAISPESK SDLVGEEMRFLEEAEEEVEENDEEEDEDDDWDDDEFEDDDDSEVEEKDAS PIKNQPALQGEVLIVEGSDKDDLAAALKQVGATNEDIEEILEEEAAFEKL ENEIEHAMDADSGTPNEAEAEEAGWKTGTDKAAKAMTQKESDANKGKVAA DVDNLEEGDTMKMDEESRGVDESDEDKEQDEDEHDEDEDGDDDEDEDDED EDQDQDGEEVENENEIEDEDKEGEHKNGLDNTVEAEGIINDRKEDKKGVS EFKDGQASMATDKSSTIAGRLVDQSYTQQDSASTSTLAASGETKLDKTHG AGRNNFWIVSGIGGVVLVAALLISRNRRRFSNGNNMLNTTAFGSNVNHDP FGMDANSSVTQHYDQYRRVTTHDSRAA back to topmRNA from alignment at KK037252.1:132701..134367- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna9220 ID=rna9220|Name=rna9220|organism=Nannochloropsis gaditana|type=mRNA|length=1667bp|location=Sequence derived from alignment at KK037252.1:132701..134367- (Nannochloropsis gaditana) CCAGCCGTTGGCCCATATTATTCTCTCTCGCTCATGATTCATGCACATTT
TTGTATGTCTTTTTGCACAGATTTAACAGAGTATACAATGAAGTTCTGCT
CACATGTGCTCATTATGGCACTGGCCATCGCATTTCTTGTGCATAAGACG
ACCGAAGCTGTTGGTAATAACGGGGCACGTTCGCGGCTAGTCTCCAAGCT
GAAGCGCGAGGTCGCAGCGAAAGAATTTAGCTCGGCCAAGTACCACAACG
CAGTACTCAACAAAATTGAGCATAAGGGAAATAAAGAGTGGTCTGCTGTT
GGAGGCAAAGAAGCGATCTCTCCTGAAAGTAAATCGGACCTTGTAGGAGA
AGAAATGCGTTTCCTAGAGGAAGCGGAGGAAGAGGTTGAGGAAAACGATG
AGGAGGAAGATGAGGACGATGATTGGGACGACGATGAATTTGAAGATGAT
GATGATTCAGAGGTGGAGGAGAAGGATGCCTCACCCATCAAAAATCAGCC
TGCTTTACAGGGCGAAGTTCTCATCGTAGAGGGGTCCGACAAGGATGACT
TGGCGGCAGCGTTAAAACAAGTCGGTGCCACGAATGAGGACATTGAAGAA
ATCCTTGAAGAGGAGGCGGCGTTTGAAAAACTGGAAAACGAAATTGAGCA
TGCGATGGACGCCGACTCAGGAACGCCAAATGAGGCCGAAGCTGAAGAAG
CAGGATGGAAGACAGGAACAGATAAAGCTGCAAAAGCAATGACGCAAAAA
GAAAGTGACGCCAACAAAGGAAAAGTAGCCGCCGACGTCGACAATCTGGA
GGAGGGAGATACGATGAAAATGGATGAGGAAAGTAGGGGAGTGGACGAAA
GTGACGAAGATAAGGAACAGGATGAGGATGAACACGACGAAGACGAGGAC
GGGGATGACGACGAAGACGAAGATGATGAAGACGAGGACCAGGACCAGGA
CGGCGAAGAAGTCGAGAACGAAAATGAGATTGAGGACGAGGATAAAGAGG
GGGAACATAAAAATGGACTAGACAATACCGTGGAAGCAGAAGGGATTATT
AATGATAGAAAAGAGGACAAAAAGGGCGTAAGTGAGTTCAAGGACGGGCA
AGCTTCAATGGCAACGGACAAAAGTAGTACAATTGCTGGTCGCCTCGTGG
ATCAATCTTATACACAACAGGATTCGGCATCGACATCGACGCTAGCAGCT
TCGGGCGAAACGAAGTTAGATAAAACGCATGGTGCAGGTAGAAACAACTT
TTGGATCGTATCAGGAATTGGTGGTGTAGTACTAGTGGCAGCCTTACTGA
TCTCGAGAAATCGACGTCGATTCTCAAATGGTAATAATATGCTTAATACT
ACGGCTTTTGGGAGCAATGTTAACCACGATCCTTTCGGAATGGATGCGAA
TTCCTCAGTCACCCAGCACTATGATCAATATAGGCGAGTAACAACCCATG
ATTCTAGAGCTGCATAAGTACACCGTGAAAATGGATTTCGTATGATCTTA
TATCATTTGCAAAAGTTATTATCAGATTACGGAAAGAGAAGATCTGAAAC
TCGCTTTGGAACACTTTTAAGTTCGGAATTCAAAAAAAATTTGGAGGGTT
TCGGGGGTGGGACCAAAAATTTGCATCATCACGTCGTGCTAAAGAATAGA
TTACGAAATTTTATAGT back to topCoding sequence (CDS) from alignment at KK037252.1:132701..134367- >rna9220 ID=rna9220|Name=rna9220|organism=Nannochloropsis gaditana|type=CDS|length=1434bp|location=Sequence derived from alignment at KK037252.1:132701..134367- (Nannochloropsis gaditana) ATGATTCATGCACATTTTTGTATGTCTTTTTGCACAGATTTAACAGAGTA TACAATGAAGTTCTGCTCACATGTGCTCATTATGGCACTGGCCATCGCAT TTCTTGTGCATAAGACGACCGAAGCTGTTGGTAATAACGGGGCACGTTCG CGGCTAGTCTCCAAGCTGAAGCGCGAGGTCGCAGCGAAAGAATTTAGCTC GGCCAAGTACCACAACGCAGTACTCAACAAAATTGAGCATAAGGGAAATA AAGAGTGGTCTGCTGTTGGAGGCAAAGAAGCGATCTCTCCTGAAAGTAAA TCGGACCTTGTAGGAGAAGAAATGCGTTTCCTAGAGGAAGCGGAGGAAGA GGTTGAGGAAAACGATGAGGAGGAAGATGAGGACGATGATTGGGACGACG ATGAATTTGAAGATGATGATGATTCAGAGGTGGAGGAGAAGGATGCCTCA CCCATCAAAAATCAGCCTGCTTTACAGGGCGAAGTTCTCATCGTAGAGGG GTCCGACAAGGATGACTTGGCGGCAGCGTTAAAACAAGTCGGTGCCACGA ATGAGGACATTGAAGAAATCCTTGAAGAGGAGGCGGCGTTTGAAAAACTG GAAAACGAAATTGAGCATGCGATGGACGCCGACTCAGGAACGCCAAATGA GGCCGAAGCTGAAGAAGCAGGATGGAAGACAGGAACAGATAAAGCTGCAA AAGCAATGACGCAAAAAGAAAGTGACGCCAACAAAGGAAAAGTAGCCGCC GACGTCGACAATCTGGAGGAGGGAGATACGATGAAAATGGATGAGGAAAG TAGGGGAGTGGACGAAAGTGACGAAGATAAGGAACAGGATGAGGATGAAC ACGACGAAGACGAGGACGGGGATGACGACGAAGACGAAGATGATGAAGAC GAGGACCAGGACCAGGACGGCGAAGAAGTCGAGAACGAAAATGAGATTGA GGACGAGGATAAAGAGGGGGAACATAAAAATGGACTAGACAATACCGTGG AAGCAGAAGGGATTATTAATGATAGAAAAGAGGACAAAAAGGGCGTAAGT GAGTTCAAGGACGGGCAAGCTTCAATGGCAACGGACAAAAGTAGTACAAT TGCTGGTCGCCTCGTGGATCAATCTTATACACAACAGGATTCGGCATCGA CATCGACGCTAGCAGCTTCGGGCGAAACGAAGTTAGATAAAACGCATGGT GCAGGTAGAAACAACTTTTGGATCGTATCAGGAATTGGTGGTGTAGTACT AGTGGCAGCCTTACTGATCTCGAGAAATCGACGTCGATTCTCAAATGGTA ATAATATGCTTAATACTACGGCTTTTGGGAGCAATGTTAACCACGATCCT TTCGGAATGGATGCGAATTCCTCAGTCACCCAGCACTATGATCAATATAG GCGAGTAACAACCCATGATTCTAGAGCTGCATAA back to top
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