|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100019g57.485.mrna |
| Orig protein id | gnl|cribi|Naga_100019g57.485 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:116190..118470 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9213 ID=rna9213|Name=rna9213|organism=Nannochloropsis gaditana|type=mRNA|length=1737bp
TAGTAGATGCGCATTATCTGTCAGCTGTCGGATACTATTTTCTTTTTCGC
GAAAAGCTACCCAGTAGCTTGGGGTTGAACACGAGAGAAATATAGAAATT
GATATGCCGGCCTTATCCTCATGATGTGTGCGCTAGGCTGCGTGATAAGA
TCGTGTCGCCAACATATCGAAGGTCATGAAGGTTTTGCCGCGGCAGGACC
TAAACATGGGGGAAGGTGGAGGCAGAGGGCGAGAGGGCGAAAGAGGGAGC
GCGGACGCAGGAAGGGGTAAGCGCATGCTTGAGGATAGACACTTGACGTC
GCCTCCCGCAGGAGTGGCAGAATGTATATACACTTCATTTGTAGTTACCG
AGTTGAACACTTGTAGACACGTAGACAGGAGACACCAGCCCTCCTAGGTC
TCTGGGCAACATTCTGGGGGTCTGCCGATCTCTTCACGCACGCTCACGGT
GTGAGTATGTCACTTGAGCACTGGCAAGAAGAACTGCAGCGGCGGGTGGG
GGAGCTGCAGGACCATTTAAAGGAGCTTAAGGAAAGCCATGGGAGTGTCT
CCACAGCTACATTACAGAAACGCAAACACCTTGACGCATGCCAGCGGCGT
CTGGATGAGGTGAGAGAGGCGAGCAAAAACTGTGACCGGGCCGTTCGAAT
TGTGAAGGATCCAGTGAAGCGGACTGCCGGAAAGGACATGTTACGCGGTG
TGGAGAGGCAAATCAGGGAGTGCCAAGACGAAGTGCGTCGAGCGGAACTG
AAATTAAACTATTCGCACGCGATCAATATGGATAAAGACACATCGGAAGG
GGAGTACAAGAAAGAGATAGACCGGATGCAGGACGGCATGAAGGAGAGCT
ATGCACGGCAGCTTGAAACGCTGGACCGTACACTCGACGTAGCGGGCAAG
GCTAGAGATGGAGTGGAATCCCAAGGCCAACAGATTCACACTCTAGCAGA
AGAAACGGGTAGGATTGGGGATGGGCTCGAGCGAGCGGAGTACGCAGTAC
AGCGCTTCAAGCGGCAAGTTTCCAGCGACCGCATTTGTCAGGCCCTCACT
GTGGGAAACGTTCTTGTGCTCGTCGTACTCGTGGTACTTGCCATTTTAAA
TCGAAAACCTCTCTTGCACTCCATCGGAGTTTGAAAGGGGGTTGGAAAGT
TACTGTGCGCACGGATTGCCGCAAGCACCCTTGAAGGAGGGCTAAATGCC
CAGCACCGCCGAGGGGAAGCTGGAAGGCGGCCACCTTTTGTACAGGAGAT
AAAGGGGCCGTAAAGCGCATTGTCAGGCGGTGAAGAGGAGGGGTGTACGT
ATCATAATATTTGAATACTTCTTTACGTAGAAAATTAAGAAAATTGACAA
ACTATCCACAAGGGACGTCGTCCGTGGGCACCTGGCTGCGATGAGCCTTT
CACTTGATTGCGCTACCTCTGATGTGATATGCTGCATGCGTGACGGAAGG
CATCGCTGCATTAAATCCATCTTCGCGATTTATGCCGCGTTCTGCATAAT
GCCCGCACGAAGCTGTTCCTTTAGTTCCGTGACCGCCGACGGGCCGTGAG
TCATGAAGAGCGTCGTCGGGGTGGGGTTGTTGCCCACGTCCTGTGGGGTC
ATGGATGAGAGTGACGCGATATAAGGACGGAAAGAGAATGTGAACGAATG
GCTGGGTAGAAGCGGCGCCTCAAACTGTGACAGGCCGGGTCGAGCGACCC
TCCATGGTCCAGACAAGTGACCTCTCAGCGGTAGCAG back to topprotein sequence of rna9213 >rna9213-protein ID=rna9213-protein|Name=rna9213|organism=Nannochloropsis gaditana|type=polypeptide|length=703bp
MPLVDVEMKLPPSLTELDEDGSLSVTFISLDKTVASDTAAFHLATALEER
ERSRGLLVLPLPTTNDAERPVFELLCFGGLSKLPNGIIRNVATECGLTLE
AITRGSLTVLNENYLLLLGQRLLSRFLIDQGWCRIFDDVYTSHTDLFPRY
TSNCSEKLDMREGKLARRDFVEAVKVVVLLNTRTTNPWREHSETANCQIG
LTISLEPMVFKRIRPPFDDLKLLATQHHVQQSQRGRLMSSQNQQDYVRDE
DGVYSGRDVFPPDEAVLEMRAVKVLPDLTKTGFLVSLPTPNIEITPLEKI
NTQHGFDAEVPRDEVALRRFWRLTHGIELPAEPLTYVRVIFEGQGRTSTI
YPTLCLVSQFVHNYSRTTQAYSQLCQTFLRLLRDFPSVLRLSTDFSSSSG
GPVGRRLSSPEKSGLSAFKTARQLRDSIKEGRPHVGDNARLQKYVALATQ
ASKKPSTNPFSSVLPSFSSSSNPSSPLLPHAIGSQSICSSKRTAKAARAL
SDPPETMNSVKVSPPPTLKFSSRTADVHSSESSAAFLTSSSSPDGVSFES
GAAFLTSSLSLDGVSSESSAAFLTSSSSPDGVDCEHVSDATSTCTSATSA
PSKMIPSRHQPPRSDSKTDWVDEAKKSNGFQVSKTTHAEPLLERKAISSS
LAMTGKKKGHTVREISIKTKSRGYESLKKQKEQANRNNAQNHKTRAKTSN
KRQ back to topmRNA from alignment at KK037252.1:116190..118470- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9213 ID=rna9213|Name=rna9213|organism=Nannochloropsis gaditana|type=mRNA|length=2281bp|location=Sequence derived from alignment at KK037252.1:116190..118470- (Nannochloropsis gaditana)
CTATGCCTCTCGTAGATGTAGAGATGAAGCTTCCCCCTTCTCTTACAGAG
CTAGACGAGGATGGTAGTCTTTCTGTGACATTCATCAGCCTTGACAAAAC
TGTGGCAAGCGACACCGCAGCGTTCCACCTGGTGAGCTGAAGCGATCCTC
CTCCGAACGGACATTTTATTTCATTTCTATTCCTCACTCTTCATGCAAAC
AGAATCTTATAAAATTTAATACTACGTAATTTTTTTAATTGGAAGTTGCT
GCTCTTTCCTCTCTTACACTAAGGCTACTGCGTTGGAGGAGAGAGAGCGA
TCGCGTGGATTGCTTGTACTTCCACTTCCCACTACCAATGATGCTGAAAG
GCCTGTTTTCGAGCTACTCTGTTTTGGAGGACTCTCTAAATTACCCAACG
GTATTATTCGAAATGTTGCGACGGAATGTGGCCTTACTCTCGAGGCGATA
ACTCGTGGAAGCTTGACCGTCCTGAATGAGAACTACCTCCTCTTGCTGGG
CCAGCGCCTACTCTCGCGCTTTTTAATTGATCAAGGCTGGTGTCGCATAT
TCGACGACGTTTATACAAGTCATACTGATCTATTTCCACGCTACACTTCC
AATTGTTCAGAGAAGCTTGACATGAGAGAGGGAAAACTCGCTAGGAGAGA
TTTCGTGGAGGCTGTCAAAGTGGTGGTCCTGCTCAACACGCGCACGACCA
ATCCCTGGCGAGAGCATAGTGAAACCGCAAATTGTCAGATAGGCCTCACC
ATCTCGCTGGAGCCCATGGTCTTCAAGCGGATCCGTCCACCTTTCGATGA
TCTTAAGCTCCTCGCAACACAGCATCATGTGCAGCAGTCGCAACGCGGTC
GTCTCATGTCGTCACAAAATCAGCAAGATTATGTTCGAGATGAGGATGGT
GTCTACAGCGGCAGAGATGTTTTTCCACCGGACGAAGCCGTTCTGGAAAT
GAGGGCAGTCAAGGTGTTGCCAGATCTTACCAAAACGGGCTTTCTTGTCT
CCTTGCCTACGCCGAACATAGAGATCACACCCTTAGAGAAGATAAATACA
CAGCACGGCTTTGATGCCGAAGTGCCCCGGGATGAGGTCGCCTTGCGTCG
CTTCTGGCGGCTCACTCACGGGATCGAGCTGCCTGCCGAGCCTCTCACTT
ACGTCCGTGTCATTTTCGAAGGCCAGGGCCGTACATCCACGATCTACCCG
ACATTGTGTCTTGTTTCTCAATTCGTGCATAATTACTCTCGTACGACCCA
GGCTTACTCTCAACTCTGCCAGACCTTTCTACGCCTCCTGCGCGACTTTC
CCAGCGTCCTCCGGCTTTCAACTGACTTTTCGTCCTCCTCTGGCGGGCCC
GTCGGGAGGCGTCTGTCGTCGCCAGAGAAATCCGGACTTAGCGCCTTTAA
AACGGCTCGGCAGCTCCGGGACAGTATAAAAGAAGGGAGACCCCACGTTG
GAGACAATGCAAGGCTGCAGAAATATGTCGCTTTAGCCACACAAGCAAGT
AAAAAACCATCCACAAACCCATTTTCATCAGTTTTACCATCTTTCTCGTC
GTCTTCAAATCCCTCATCACCCCTGCTTCCCCATGCCATTGGCTCTCAAT
CAATTTGCTCCTCCAAAAGGACAGCAAAAGCAGCGAGAGCCCTCTCAGAT
CCTCCTGAAACAATGAACTCCGTGAAGGTCAGTCCTCCACCAACTTTGAA
ATTCTCTTCCCGTACCGCAGATGTCCACTCCTCTGAGTCCAGTGCAGCTT
TTCTTACTTCTTCTTCGTCACCAGATGGCGTGTCCTTTGAGTCCGGTGCA
GCTTTTCTTACTTCTTCTTTGTCACTAGATGGCGTGTCCTCTGAGTCCAG
TGCAGCTTTTCTTACTTCTTCTTCGTCACCAGATGGCGTGGACTGCGAAC
ATGTCTCTGACGCGACTAGCACGTGTACATCCGCGACGTCCGCGCCATCA
AAAATGATTCCATCACGTCATCAGCCCCCTCGCTCGGATTCAAAGACTGA
CTGGGTAGATGAGGCGAAAAAATCGAATGGTTTCCAAGTTTCAAAGACGA
CACATGCGGAACCTTTATTAGAAAGGAAAGCGATTAGCTCATCACTTGCG
ATGACGGGGAAGAAAAAAGGACATACGGTGCGGGAGATATCTATCAAGAC
CAAATCGCGAGGATATGAAAGTTTGAAAAAGCAAAAGGAACAGGCGAACA
GAAATAATGCCCAAAATCACAAAACGAGGGCGAAAACTTCAAATAAAAGA
CAGTAACTCAGCGGAAAGACAATTAAGCTTC back to topCoding sequence (CDS) from alignment at KK037252.1:116190..118470- >rna9213 ID=rna9213|Name=rna9213|organism=Nannochloropsis gaditana|type=CDS|length=4224bp|location=Sequence derived from alignment at KK037252.1:116190..118470- (Nannochloropsis gaditana)
GCTACTGCGTTGGAGGAGAGAGAGCGATCGCGTGGATTGCTTGTACTTCC
ACTTCCCACTACCAATGATGCTGAAAGGCCTGTTTTCGAGCTACTCTGTT
TTGGAGGACTCTCTAAATTACCCAACGGTATTATTCGAAATGTTGCGACG
GAATGTGGCCTTACTCTCGAGGCGATAACTCGTGGAAGCTTGACCGTCCT
GAATGAGAACTACCTCCTCTTGCTGGGCCAGCGCCTACTCTCGCGCTTTT
TAATTGATCAAGGCTGGTGTCGCATATTCGACGACGTTTATACAAGTCAT
ACTGATCTATTTCCACGCTACACTTCCAATTGTTCAGAGAAGCTTGACAT
GAGAGAGGGAAAACTCGCTAGGAGAGATTTCGTGGAGGCTGTCAAAGTGG
TGGTCCTGCTCAACACGCGCACGACCAATCCCTGGCGAGAGCATAGTGAA
ACCGCAAATTGTCAGATAGGCCTCACCATCTCGCTGGAGCCCATGGTCTT
CAAGCGGATCCGTCCACCTTTCGATGATCTTAAGCTCCTCGCAACACAGC
ATCATGTGCAGCAGTCGCAACGCGGTCGTCTCATGTCGTCACAAAATCAG
CAAGATTATGTTCGAGATGAGGATGGTGTCTACAGCGGCAGAGATGTTTT
TCCACCGGACGAAGCCGTTCTGGAAATGAGGGCAGTCAAGGTGTTGCCAG
ATCTTACCAAAACGGGCTTTCTTGTCTCCTTGCCTACGCCGAACATAGAG
ATCACACCCTTAGAGAAGATAAATACACAGCACGGCTTTGATGCCGAAGT
GCCCCGGGATGAGGTCGCCTTGCGTCGCTTCTGGCGGCTCACTCACGGGA
TCGAGCTGCCTGCCGAGCCTCTCACTTACGTCCGTGTCATTTTCGAAGGC
CAGGGCCGTACATCCACGATCTACCCGACATTGTGTCTTGTTTCTCAATT
CGTGCATAATTACTCTCGTACGACCCAGGCTTACTCTCAACTCTGCCAGA
CCTTTCTACGCCTCCTGCGCGACTTTCCCAGCGTCCTCCGGCTTTCAACT
GACTTTTCGTCCTCCTCTGGCGGGCCCGTCGGGAGGCGTCTGTCGTCGCC
AGAGAAATCCGGACTTAGCGCCTTTAAAACGGCTCGGCAGCTCCGGGACA
GTATAAAAGAAGGGAGACCCCACGTTGGAGACAATGCAAGGCTGCAGAAA
TATGTCGCTTTAGCCACACAAGCAAGTAAAAAACCATCCACAAACCCATT
TTCATCAGTTTTACCATCTTTCTCGTCGTCTTCAAATCCCTCATCACCCC
TGCTTCCCCATGCCATTGGCTCTCAATCAATTTGCTCCTCCAAAAGGACA
GCAAAAGCAGCGAGAGCCCTCTCAGATCCTCCTGAAACAATGAACTCCGT
GAAGGTCAGTCCTCCACCAACTTTGAAATTCTCTTCCCGTACCGCAGATG
TCCACTCCTCTGAGTCCAGTGCAGCTTTTCTTACTTCTTCTTCGTCACCA
GATGGCGTGTCCTTTGAGTCCGGTGCAGCTTTTCTTACTTCTTCTTTGTC
ACTAGATGGCGTGTCCTCTGAGTCCAGTGCAGCTTTTCTTACTTCTTCTT
CGTCACCAGATGGCGTGGACTGCGAACATGTCTCTGACGCGACTAGCACG
TGTACATCCGCGACGTCCGCGCCATCAAAAATGATTCCATCACGTCATCA
GCCCCCTCGCTCGGATTCAAAGACTGACTGGGTAGATGAGGCGAAAAAAT
CGAATGGTTTCCAAGTTTCAAAGACGACACATGCGGAACCTTTATTAGAA
AGGAAAGCGATTAGCTCATCACTTGCGATGACGGGGAAGAAAAAAGGACA
TACGGTGCGGGAGATATCTATCAAGACCAAATCGCGAGGATATGAAAGTT
TGAAAAAGCAAAAGGAACAGGCGAACAGAAATAATGCCCAAAATCACAAA
ACGAGGGCGAAAACTTCAAATAAAAGACAGTAAATGCCTCTCGTAGATGT
AGAGATGAAGCTTCCCCCTTCTCTTACAGAGCTAGACGAGGATGGTAGTC
TTTCTGTGACATTCATCAGCCTTGACAAAACTGTGGCAAGCGACACCGCA
GCGTTCCACCTGGCTACTGCGTTGGAGGAGAGAGAGCGATCGCGTGGATT
GCTTGTACTTCCACTTCCCACTACCAATGATGCTGAAAGGCCTGTTTTCG
AGCTACTCTGTTTTGGAGGACTCTCTAAATTACCCAACGGTATTATTCGA
AATGTTGCGACGGAATGTGGCCTTACTCTCGAGGCGATAACTCGTGGAAG
CTTGACCGTCCTGAATGAGAACTACCTCCTCTTGCTGGGCCAGCGCCTAC
TCTCGCGCTTTTTAATTGATCAAGGCTGGTGTCGCATATTCGACGACGTT
TATACAAGTCATACTGATCTATTTCCACGCTACACTTCCAATTGTTCAGA
GAAGCTTGACATGAGAGAGGGAAAACTCGCTAGGAGAGATTTCGTGGAGG
CTGTCAAAGTGGTGGTCCTGCTCAACACGCGCACGACCAATCCCTGGCGA
GAGCATAGTGAAACCGCAAATTGTCAGATAGGCCTCACCATCTCGCTGGA
GCCCATGGTCTTCAAGCGGATCCGTCCACCTTTCGATGATCTTAAGCTCC
TCGCAACACAGCATCATGTGCAGCAGTCGCAACGCGGTCGTCTCATGTCG
TCACAAAATCAGCAAGATTATGTTCGAGATGAGGATGGTGTCTACAGCGG
CAGAGATGTTTTTCCACCGGACGAAGCCGTTCTGGAAATGAGGGCAGTCA
AGGTGTTGCCAGATCTTACCAAAACGGGCTTTCTTGTCTCCTTGCCTACG
CCGAACATAGAGATCACACCCTTAGAGAAGATAAATACACAGCACGGCTT
TGATGCCGAAGTGCCCCGGGATGAGGTCGCCTTGCGTCGCTTCTGGCGGC
TCACTCACGGGATCGAGCTGCCTGCCGAGCCTCTCACTTACGTCCGTGTC
ATTTTCGAAGGCCAGGGCCGTACATCCACGATCTACCCGACATTGTGTCT
TGTTTCTCAATTCGTGCATAATTACTCTCGTACGACCCAGGCTTACTCTC
AACTCTGCCAGACCTTTCTACGCCTCCTGCGCGACTTTCCCAGCGTCCTC
CGGCTTTCAACTGACTTTTCGTCCTCCTCTGGCGGGCCCGTCGGGAGGCG
TCTGTCGTCGCCAGAGAAATCCGGACTTAGCGCCTTTAAAACGGCTCGGC
AGCTCCGGGACAGTATAAAAGAAGGGAGACCCCACGTTGGAGACAATGCA
AGGCTGCAGAAATATGTCGCTTTAGCCACACAAGCAAGTAAAAAACCATC
CACAAACCCATTTTCATCAGTTTTACCATCTTTCTCGTCGTCTTCAAATC
CCTCATCACCCCTGCTTCCCCATGCCATTGGCTCTCAATCAATTTGCTCC
TCCAAAAGGACAGCAAAAGCAGCGAGAGCCCTCTCAGATCCTCCTGAAAC
AATGAACTCCGTGAAGGTCAGTCCTCCACCAACTTTGAAATTCTCTTCCC
GTACCGCAGATGTCCACTCCTCTGAGTCCAGTGCAGCTTTTCTTACTTCT
TCTTCGTCACCAGATGGCGTGTCCTTTGAGTCCGGTGCAGCTTTTCTTAC
TTCTTCTTTGTCACTAGATGGCGTGTCCTCTGAGTCCAGTGCAGCTTTTC
TTACTTCTTCTTCGTCACCAGATGGCGTGGACTGCGAACATGTCTCTGAC
GCGACTAGCACGTGTACATCCGCGACGTCCGCGCCATCAAAAATGATTCC
ATCACGTCATCAGCCCCCTCGCTCGGATTCAAAGACTGACTGGGTAGATG
AGGCGAAAAAATCGAATGGTTTCCAAGTTTCAAAGACGACACATGCGGAA
CCTTTATTAGAAAGGAAAGCGATTAGCTCATCACTTGCGATGACGGGGAA
GAAAAAAGGACATACGGTGCGGGAGATATCTATCAAGACCAAATCGCGAG
GATATGAAAGTTTGAAAAAGCAAAAGGAACAGGCGAACAGAAATAATGCC
CAAAATCACAAAACGAGGGCGAAAACTTCAAATAAAAGACAGTAAATGCC
TCTCGTAGATGTAGAGATGAAGCTTCCCCCTTCTCTTACAGAGCTAGACG
AGGATGGTAGTCTTTCTGTGACATTCATCAGCCTTGACAAAACTGTGGCA
AGCGACACCGCAGCGTTCCACCTG back to top
|