rna9209, rna9209 (mRNA) Nannochloropsis gaditana

Overview
Namerna9209
Unique Namerna9209
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1320
Alignment locationKK037252.1:110743..111072 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100019g61.473.mrna
Orig protein idgnl|cribi|Naga_100019g61.473
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:110743..111072 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100019g61gene8933Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9209rna9209-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21451.1cds9179Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9209 ID=rna9209|Name=rna9209|organism=Nannochloropsis gaditana|type=mRNA|length=1320bp
ATGCTGTCTGCCTCCTCCGCCTCGATAGCTTCAGCCCTACCAGCTAGTGA
TCCTAATTTTCCAGCCTCTTTGCAGGGTGTCAGTGCGCGTGGTCTGGTGA
GCTTAGAGCGTGCGGAGCAAATACTACAACGCCTCATTGATACCGTGAAC
GAGCAAGGACTGCAAATTTCGAGCATATTTTTGCTACTACAGACCTTGGT
GGGGACGGATACCCAGCCGCTGCCTCGTAGCCTCCTGGACGTAGAGGGCA
AGTTTTCCCGCCTCAGTCATCGCCTAGAAAGGATCGAGCAAGCCATCCAG
GTTCCGGGACTTGCGCCCGGCGTATCTATCGGTGAGGTTGTGAACGCGAA
CGGAGTAGAACTGAACCACGCAGCTGAAGCACTTTTGACAAAGGCCGATA
AAGCTGACGTCGAGGTCAGACAGCACAAGCTGGAAGAGGAGGTCGCCGGT
GTCTATGCGTGGGCTGGGGCGAGGGAGCTCGTGGAGCGGCTGGAGGAGTC
AAATCGCGCCACACGCGTTCAAGTGCATGCTATGGAGACCGCCCTGGGGT
GTAAGCTGGACAAATCGGAGCTTGCCGGGATGGAGGCTACCGTGAACCGC
CTGAAGGCTTTCGATGCGCGCATGGAGACCTTGGAGCGAGGGCATGTCCA
GAACATGGCCGACGTGCAGGCAAAGGTACAAGCCCTCGAAGAGCATAGGA
TGGAAACAGACAGGTTGGTGGGCGCGACGCGCAGGGCTGTGGGAGAGTTG
GAAGAGAGGCACGGCGCCTGGAAAATGGAGACTCTGGAGCTTCTCAAGGA
GGTGGACAAGGAGCTGGCCGCGACAGCCTCCGTCACGCAGCTGGAGAGAA
AGCTTGACGCCCGTGTGTGGGAGCGAGAATGGCGTTCGGCCTGCGAGCGT
CTGGACCAAAAAGTCGATGTACCTGAGATGGTTGCGCTGGCGGAGAGACT
GGAAAGCGTGGCAGGAGACCTTGTGAAGCTGAGCAGAGAAAGCGACCAGT
ACTCCCGCTTTGTAGCGTGGTATTATTCACGAGGACAAGCTTACGAGCAC
AACATGCAGACACTCAACCGTACCCTCGGTCGACTAGCAAGGGACTCCCT
CTTGAAACATGTGGCATCAGCGGAGGTCCGGAGTGGCATAGGAGGCGGGC
AAAGAGGAGAGTATGGGTCACAAGTAGAAAATGGCATAAGAGATCGAGGT
TTGGACGATAGAGAGCTTATTTTGTCTTCCTCGTCTTCAGACACGGCATC
GCCACCTAACACAGAGAGCACGCCTGAGGACGAACACGCCAAGGAGGGAT
CCTTCAAACCACTTGCGTAG
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protein sequence of rna9209

>rna9209-protein ID=rna9209-protein|Name=rna9209|organism=Nannochloropsis gaditana|type=polypeptide|length=76bp
MATKPEWVYYVCASTIYRTTIPVFLTGVHTALHPFARLHGQGNFRRNIII
HRKSDMICRVKNSIYDLVYETQIDTS
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mRNA from alignment at KK037252.1:110743..111072-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9209 ID=rna9209|Name=rna9209|organism=Nannochloropsis gaditana|type=mRNA|length=330bp|location=Sequence derived from alignment at KK037252.1:110743..111072- (Nannochloropsis gaditana)
ATGGCGACAAAGCCTGAATGGGTATACTACGTGTGTGCGAGTACAATTTG TTCTACTGTCGCGCCCTACTTTGAGTGAGGCGAAAAGCTGCAGAAAACGC AGACGAATCCAGCCCCCCCCCCGCCTCGAGGGCCCCCCGCTGACCAAGAC AGAACCACTATCCCTGTGTTTCTCACGGGCGTACATACTGCATTACATCC ATTCGCGCGATTGCATGGCCAGGGAAATTTCAGAAGAAATATCATCATCC ATCGTAAATCTGATATGATTTGCAGAGTGAAGAATAGTATCTACGATCTT GTATATGAAACTCAGATTGACACGTCTTGA
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Coding sequence (CDS) from alignment at KK037252.1:110743..111072-

>rna9209 ID=rna9209|Name=rna9209|organism=Nannochloropsis gaditana|type=CDS|length=462bp|location=Sequence derived from alignment at KK037252.1:110743..111072- (Nannochloropsis gaditana)
ACAGAACCACTATCCCTGTGTTTCTCACGGGCGTACATACTGCATTACAT
CCATTCGCGCGATTGCATGGCCAGGGAAATTTCAGAAGAAATATCATCAT
CCATCGTAAATCTGATATGATTTGCAGAGTGAAGAATAGTATCTACGATC
TTGTATATGAAACTCAGATTGACACGTCTTGAATGGCGACAAAGCCTGAA
TGGGTATACTACGTGTGTGCGAGTACAATTTACAGAACCACTATCCCTGT
GTTTCTCACGGGCGTACATACTGCATTACATCCATTCGCGCGATTGCATG
GCCAGGGAAATTTCAGAAGAAATATCATCATCCATCGTAAATCTGATATG
ATTTGCAGAGTGAAGAATAGTATCTACGATCTTGTATATGAAACTCAGAT
TGACACGTCTTGAATGGCGACAAAGCCTGAATGGGTATACTACGTGTGTG
CGAGTACAATTT
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Synonyms
Publications