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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100019g71.510.mrna |
| Orig protein id | gnl|cribi|Naga_100019g71.510 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:84515..85882 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9200 ID=rna9200|Name=rna9200|organism=Nannochloropsis gaditana|type=mRNA|length=1250bp
GTTCCTGAGACCGACAAAGTAGTAGCAGGAGAGACAGGAGGGTCGGGCCG
GGGTGCAGGAGGGGCAAAAGGACGGTCTTCTTCCGAGTCACTTCCATAGT
CCACGCCCAGCAAGGACATACCTGCTTTAACAAATTGTGCGCGCAGGATA
AGAAAAATTTGAGGTGAATGTAAAAAACGACGAGGCAGAATAGGGCGTCG
ACTCGCACAAAATGAGTCTCCCCACCTAGCTGGGAATGCCGCTCAAAAGG
AATCGATGAAATTTTCGTCCCTCTTATGGTTACCGCCTGTCTCTCGTGTG
ATTCGACACAATTTTTATCGCATCGAATGCAACCACAGGATTCCTCGTTA
GCCTTAGCCTGCGCGCATGGATCCACCAAGATCTTCAGACAGTGTACGTT
CGAGTCATTCCCTCAAGAGTCCTTTGCTCCTTGATCACAGAGCGCCCCAA
GCTATCTCCCCCTCCGCCCCGCCGGCTCCCTCAGTCTCAGAGGACTCCCC
ACAACGCCTCTATCCTCCCATGCCAGAGCCTGACTCACCTTTCCTCTCCC
CTTCCTCCCGCTTCTTGGCCGCTGACGCGACGAGTGACGGGGCGCGTTGG
GCGGGTGCACCGGCTCCGAGCTGGCGGACCGAGACGGCAGGGTCCCCGGC
ACACCGCCTCCAAAACGTCCCTTCGGCCCCCTCTGCGAGCGCAGGCAACA
CCCGCAGCCACGACCCCGCCATTTCTTCCTTGAGGCCGTCGTCTGAGTTC
CTCCGTCAAGCGCAAGCGCTGGCTATGCGGCGCGTTACTGAGGAGAACTT
ACGCGCAGAAGAGGCATCTCGCCAAGGGTGGCAGCGCAACGTCCTGGACC
ATGCGACCCTGCGGGCGGCGGAGGCGGCCGCAGCCGCGAGACGATCTCGC
CCGGGGCTGGAGGAGAGCGAAGGTCTGCAGGTGGATCCGTCCACGCACGA
CGGGGCGCCATGTTTGACGGAGCTATTGGAAGCTGGCAAGAAGAGGGAGG
GAGGGAGGGAGGGAGGCCGGGACGGGGGTAAAGAGGGAGGGCACCATGAC
GGGTATAAAATGGCGGAGTACGACATCAAGGAAGGGTACCAAATCAGTGA
ATACCGAAGTATATACGACTCATGAGGCATACAGGAAAGCATAGACTCTC
GAGAAAGCAAGGATGACCGCGACGCAGAGGCTGTGAAATAGGGGGTACTG
AAGCGTGCTTGCATGTATAAAGAAAAACAGGATCAGGAGGGGAGCAACTT back to topprotein sequence of rna9200 >rna9200-protein ID=rna9200-protein|Name=rna9200|organism=Nannochloropsis gaditana|type=polypeptide|length=248bp
MDPPRSSDSHSLKSPLLLDHRAPQAISPSAPPAPSVSEDSPQRLYPPMPE
PDSPFLSPSSRFLAADATSDGARWAGAPAPSWRTETAGSPAHRLQNVPSA
PSASAGNTRSHDPAISSLRPSSEFLRQAQALAMRRVTEENLRAEEASRQG
WQRNVLDHATLRAAEAAAAARRSRPGLEESEGLQVDPSTHDGAPCLTELL
EAGKKREGGREGGRDGGKEGGHHDGYKMAEYDIKEGYQISEYRSIYDS back to topmRNA from alignment at KK037252.1:84515..85882+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9200 ID=rna9200|Name=rna9200|organism=Nannochloropsis gaditana|type=mRNA|length=1368bp|location=Sequence derived from alignment at KK037252.1:84515..85882+ (Nannochloropsis gaditana)
GTTCCTGAGACCGACAAAGTAGTAGCaggagagacaggagggtCGGGCCG
gggtgcaggaggggcaaaagGACGGTCTTCTTCCGAGTCACTTCCATAGT
CCACGCCCAGCAAGGACATACCTGCTTTAACAAATTGTGCGCGCAGGATA
AGAAAAATTTGAGGTGAATGTAAAAAACGACGAGGCAGAATAGGGCGTCG
ACTCGCACAAAATGAGTCTCCCCACCTAGCTGGGAATGCCGCTCAAAAGG
AATCGATGAAATTTTCGTCCCTCTTATGGTTACCGCCTGTCTCTCGTGTG
ATTCGACACAATTTTTATCGCATCGAATGCAACCACAGGATTCCTCGTTA
GCCTTAGCCTGCGCGCATGGATCCACCAAGATCTTCAGACAGTGTACGTT
CGAGTGTAAGCAACAATCCCCCTCCAGACACTCCACCCAGGCAGAGGTCT
AGTCGGATTTTATCATGATTTTCCGTGCGCTTATTTGTTTGCACTTCTAT
TTCCCACCACAACTATGAGACAGCATTCCCTCAAGAGTCCTTTGCTCCTT
GATCACAGAGCGCCCCAAGctatctccccctccgccccgccggcTCCCTC
AGTCTCAGAGGACTCCCCACAACGCCTCTATCCTCCCATGCCAGAGCCTG
ACTcacctttcctctccccttcctcccgcttcttggCCGCTGACGCGACG
AGTGACGGGGCGCGTTGGGCGGGTGCACCGGCTCCGAGCTGGCGGACCGA
GACGGCAGGGTCCCCGGCACACCGCCTCCAAAACGTCCCTTCGGCCCCCT
CTGCGAGCGCAGGCAACACCCGCAGCCACGACCCCgccatttcttccttg
aGGCCGTCGTCTGAGTTCCTCCGTCAAGCGCAAGCGCTGGCTATGCGGCG
CGTTACTGAGGAGAACTTACGCGCAGAAGAGGCATCTCGCCAAGGGTGGC
AGCGCAACGTCCTGGACCATGCGACCctgcgggcggcggaggcggccgca
gCCGCGAGACGATCTCGCccggggctggaggagagcgaAGGTCTGCAGGT
GGATCCGTCCACGCACGACGGGGCGCCATGTTTGACGGAGCTATTGGAAG
Ctggcaagaagagggagggagggagggagggaggccgggacgggggtaaa
gagggagggcaccaTGACGGGTATAAAATGGCGGAGTACGACATCAAGGA
AGGGTACCAAATCAGTGAATACCGAAGTATATACGACTCATGAGGCATAC
AGGAAAGCATAGACTCTCGAGAAAGCAAGGATGACCGCGACGCAGAGGCT
GTGAAATAGGGGGTACTGAAGCGTGCTTGCATGTATAAAGAAAAACAGGA
TCAGGAGGGGAGCAACTT back to topCoding sequence (CDS) from alignment at KK037252.1:84515..85882+ >rna9200 ID=rna9200|Name=rna9200|organism=Nannochloropsis gaditana|type=CDS|length=1494bp|location=Sequence derived from alignment at KK037252.1:84515..85882+ (Nannochloropsis gaditana)
ATGGATCCACCAAGATCTTCAGACAGTCATTCCCTCAAGAGTCCTTTGCT
CCTTGATCACAGAGCGCCCCAAGctatctccccctccgccccgccggcTC
CCTCAGTCTCAGAGGACTCCCCACAACGCCTCTATCCTCCCATGCCAGAG
CCTGACTcacctttcctctccccttcctcccgcttcttggCCGCTGACGC
GACGAGTGACGGGGCGCGTTGGGCGGGTGCACCGGCTCCGAGCTGGCGGA
CCGAGACGGCAGGGTCCCCGGCACACCGCCTCCAAAACGTCCCTTCGGCC
CCCTCTGCGAGCGCAGGCAACACCCGCAGCCACGACCCCgccatttcttc
cttgaGGCCGTCGTCTGAGTTCCTCCGTCAAGCGCAAGCGCTGGCTATGC
GGCGCGTTACTGAGGAGAACTTACGCGCAGAAGAGGCATCTCGCCAAGGG
TGGCAGCGCAACGTCCTGGACCATGCGACCctgcgggcggcggaggcggc
cgcagCCGCGAGACGATCTCGCccggggctggaggagagcgaAGGTCTGC
AGGTGGATCCGTCCACGCACGACGGGGCGCCATGTTTGACGGAGCTATTG
GAAGCtggcaagaagagggagggagggagggagggaggccgggacggggg
taaagagggagggcaccaTGACGGGTATAAAATGGCGGAGTACGACATCA
AGGAAGGGTACCAAATCAGTGAATACCGAAGTATATACGACTCATGAATG
GATCCACCAAGATCTTCAGACAGTCATTCCCTCAAGAGTCCTTTGCTCCT
TGATCACAGAGCGCCCCAAGctatctccccctccgccccgccggcTCCCT
CAGTCTCAGAGGACTCCCCACAACGCCTCTATCCTCCCATGCCAGAGCCT
GACTcacctttcctctccccttcctcccgcttcttggCCGCTGACGCGAC
GAGTGACGGGGCGCGTTGGGCGGGTGCACCGGCTCCGAGCTGGCGGACCG
AGACGGCAGGGTCCCCGGCACACCGCCTCCAAAACGTCCCTTCGGCCCCC
TCTGCGAGCGCAGGCAACACCCGCAGCCACGACCCCgccatttcttcctt
gaGGCCGTCGTCTGAGTTCCTCCGTCAAGCGCAAGCGCTGGCTATGCGGC
GCGTTACTGAGGAGAACTTACGCGCAGAAGAGGCATCTCGCCAAGGGTGG
CAGCGCAACGTCCTGGACCATGCGACCctgcgggcggcggaggcggccgc
agCCGCGAGACGATCTCGCccggggctggaggagagcgaAGGTCTGCAGG
TGGATCCGTCCACGCACGACGGGGCGCCATGTTTGACGGAGCTATTGGAA
GCtggcaagaagagggagggagggagggagggaggccgggacgggggtaa
agagggagggcaccaTGACGGGTATAAAATGGCGGAGTACGACATCAAGG
AAGGGTACCAAATCAGTGAATACCGAAGTATATACGACTCATGA back to top
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