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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100019g74.500.mrna |
| Orig protein id | gnl|cribi|Naga_100019g74.500 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:79311..80755 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9196 ID=rna9196|Name=rna9196|organism=Nannochloropsis gaditana|type=mRNA|length=2365bp
TCATTACCAGGACAAAAGCAGCTCAGGTGTCGTCGCCGTCGTACTTTTAG
CCGTGCCAGCATGACGGACTCCACTGCCCCAGTCGTCGACGTGGATGCCT
TGGCTGCAGCCGTCACGAAGCAAGGTGGTGTGGTAAAAATGTTGAAGAAA
GACGGGGCCAAGGCGGAGGTCTTGGAGCCAGAAGTGGCCAAGCTTCTGGC
CCTCAGAGCTGAATTTGACGCCGCACGTAAAGCCGCGGATGGCAATAATA
CAGACAAGCCTTTCAACCGAGCCGCCTTTGACGATTTAGTCAAGCGCAAA
ATGTTCGTAGTTTCAGCGTTCGAAATCCATGGTGGTGTAGGCGGTCTGTT
TGACTTAGGACCGGCCTCGTGCGCGCTCAAAGCAAACATACTGGACGTGT
GGCGCCAGCACTTCATTTTGGAGGAGAACATGCTGGAGATGGAGTGCACG
TGTCTGACTCCGGAGGTGGTCCTGAAAACGAGTGGCCACGTGGAAAAATT
CACCGACTTGATGGTCAAGGACGAGAGCACAGGGGATTGTCATCGGGCGG
ACAAGCTGTTGGAGGATTTCATCGACAGCTTTTTGGAGAGCAACCCCACC
CTCTCACGTGAGGAGCAGGATGAGCACCGGCGGGTCCAGCGGCAAGCGGA
CGCCTACACGCCCGAGGAGCTGCACGAACTCTTCCAGAAATACGGCATCG
TCAGCCCCACAACAGGCAATGCCCTCACCTTTCCCTTCGCTTTCAACCTC
ATGTTCAAGACCTCTATCGGGCCCGAGGGCGTGGCTGCAGGCTATCTGCG
TCCGGAGACGGCCCAAGGGCTCTTTGTCAACTTCCGCCGCCTCCTCGAGT
ACAATTCGGGTCGCATGCCGTTTGCCGCCGCCCAAATTGGCCTGGGCTTT
CGGAACGAGATCTCCCCTCGGGCAGGCCTCCTCCGCGTGCGCGAGTTTTG
CATGGCGGAGATAGAGCACTTCGTGAACCCGCAGGACAAGAAACACCCCA
AGTTCGCCTCCCTCGCCGGTCAGTCCCTGGTCCTCTTCCCCAACGACGAG
CAGCTCGGATCGGGGAAGACGCGGGTGATGACAATCGGCGAGGCGGTTCG
GGAGGGGATCGTGAACAACGAGACGCTTGGGTTCTTCATGGCCAAGACCT
GGCGGTTCATGGAGAAGATCGGCATGGACGCTGCCAGGCTGCGGTTTCGA
CAGCACCTAAAGACAGAGATGGCGCATTACGCGGCAGACTGCTGGGACCT
GGAGATCAAGTCCAGCTACGGGTGGGTGGAGTGCGTGGGCCACGCGGACC
GGGCATGCTATGACCTGATGGTGCACTCGAAGAAGAGCAAGGTGCCCCTC
ATTGCCTCCTACACGCTGCCGGAGCCGCGGGAGGAGGAGGTGTGGGTGAT
GAAGGCGGATAAGGCGGTGATCGGCAAGACCTTCAAGCAGGAGCAGAAGA
AGGTGATGGCAGCCCTGGAGGCGCTGACAGAAGAGGGGGGCGAGCGAGTG
GAGGCGGTGCTGGCCGAGTTGGAGGGGCCGGAGGGGGCGGCGGAGGTGGA
GGGTTGCCGCGTTACGCGAGGCATGGTGACTTGGAGCAAGGTCAAGAGGA
TGGTCCAAGAGGTCAAGTACATGCCCAGCGTCATCGAGCCCTCCTTTGGG
ATCGGCCGCGTCCTCTACTCCCTCCTCGAGCATTCTTTTTACCAACGGAA
GACGGACGAGAACCGGTGCGTGATGGCTTTCCTCCCCCGCGTAGCCCCCA
TCAAGGTGGGGGTGTACCCGCTGTTGAACAAGCCCGAGTTCGCGCCCTTC
ACCGAGAGCATCGTCGGGAAGCTGACGGAGGCCGGGATCTCCAACAGGGC
GGACGCGACGGGGGTGAGTGTGGGGAGACGGTACTCGCGCGCCGACGAGA
TCGGCTGCCCCTTCGGCGTGACCGTAGACTATGAGACCCTGGCGGCCCAG
GACGTGACGGTACGGGAGCGGGACAGCACGGCGCAGATCCGCGTCCCGAT
CGAGAGGCTGGTGCCGCTCTTGAAGGGGCTGGTGGACGGGAGTAAGACGT
GGGAGAAGGACGCGATGGGCAGCTTCCCTGTTGTGCGGACTGGGGAGGAG
GAAGAAGATGGGGGGGGAAGAAGGGGGGGGGGAACACTGAAGGAGGGCGT
GGTGACGGTCGTGGAGAAGACACCGCGAGGCAGGTTCTCGAGACCGGCGG
AGACTGTGACCTCGATACCGGCGATGGATAAGCTGAGGCTGGAATAGGAT
GGCGTGGAGGTGGGAGTGCATGTTGGCAGGATGTATTGGATAGAGGAGAG
CAGGGCAGCGTCGTGCCGATCGTGACTAGGTGGCGTTACAATAGATAGCA
ATATGGCGACGTTGA back to topprotein sequence of rna9196 >rna9196-protein ID=rna9196-protein|Name=rna9196|organism=Nannochloropsis gaditana|type=polypeptide|length=413bp
MRRYADLGVDALVTDFPERFVAVRQEGEEALRVAQKAAGRGGGVGEDAEG
REGKERGRGPACEEGGDGAWAQDPRGVPGASCQDVAGARALHRESQVMSA
AYPGPLHQPRRRLVKALRHAWPLLRALEGRSRDPTARCNDEEKTGGMLPA
LLGEGTREGPVWHLQLAARQAEESATAVLKPRLPRRRRGWTQAVDSERVR
NVQESLPTTLEKGGAKRGGRGQGGWSCTEAPESSKVLDPFPLSATGEDGK
GGYGHSCDRGEAPDGPPGSRCRGQREGVVWFLLALEHVARCDVELCEVGE
GTLQSVTGSQGSGRNSIGPLRTEGVIVARVVERLLIRHEGAESGPRRTYL
FPFPGDRESDAYSRAGVTARIPRVVCTERCLIAFWPLVAHSTCSVVSCVC
DHDKVIVVVREVA back to topmRNA from alignment at KK037252.1:79311..80755- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9196 ID=rna9196|Name=rna9196|organism=Nannochloropsis gaditana|type=mRNA|length=1445bp|location=Sequence derived from alignment at KK037252.1:79311..80755- (Nannochloropsis gaditana)
ATGCGCCGGTATGCGGACCTCGGCGTAGACGCCCTGGTCACGGACTTCCC
CGAGCGCTTCGTTGCAGTGCGACAGGAGGGAGAGGAGGCCCTGCGCGTCG
CACAAAAGGCAGCCGGGAGAGGCGGGGGGGTGGGAGAGGATGCGGAGGGT
CGGGAGGGGAAGGAAAGGGGTCGAGGCCCCGCCTGCGAGGAGGGGGGGGA
CGGCGCGTGGGCGCAGGACCCGCGGGGGGTACCAGGGGCATCCTGCCAAG
ACGTGGCGGGTGCGAGGGCGCTGCATCGCGAGTCTCAGGTCATGTCAGCC
GCGTATCCTGGCCCCCTCCATCAACCGCGCCGGCGCCTTGTCAAGGCGCT
GCGCCACGCCTGGCCCCTGCTCCGGGCCCTGGAAGGTCGATCACGGGATC
CCACGGCCCGATGCAACGACGAGGAGAAGACCGGAGGGATGCTGCCAGCC
TTGCTGGGGGAGGGGACGAGGGAAGGCCCGGTCTGGCATTTGCAGCTGGC
GGCGCGGCAAGCGGAAGAGTCTGCGACAGCGGTATTGAAGCCCCGCTTGC
CCCGACGTCGACGGGGCTGGACCCAGGCGGTGGACAGTGAGAGGGTCAGG
AACGTGCAGGAATCCCTACCCACGACGCTCGAGAAGGGGGGGGCAAAGCG
CGGTGGGCGAGGGCAGGGGGGTTGGTCTTGTACGGAGGCTCCGGAGAGCT
CGAAGGTCCTGGACCCGTTCCCCTTGTCGGCCACAGGAGAGGATGGGAAA
GGCGGTAGGAAGGAGGACGGGGGGCCTACTGCCTATGGAAGACTCTGGAT
GGATGGGCGAGACGAGGCAGAGGGCGCGCACGACCGGCCATTCCTCCCTT
TTGAAAGGGTATGGGCACAGCTGTGATAGGGGAGAGGCACCCGACGGGCC
GCCAGGGAGTCGGTGTCGTGGTCAGCGCGAGGGGGTTGTCTGGTTTCTAT
TAGCATTGGAGCACGTCGCACGGTGTGATGTGGAGCTGTGTGAAGTCGGT
GAGGGAACTTTGTGCATAAACGACGGTGTAAGAGGTCTCTGAGCAGCAAT
AATGGCATGGAAGGCAGAGTGTGACTGGCTCCCAGGGTAGCGGCAGAAAC
AGCATCGGCCCCTTGCGCACCGAGGGTGTGATAGTCGCGCGTGTCGTCGA
GCGTCTTCTCATTCGACACGAGGGGGCAGAGTCCGGCCCGCGTCGCACTT
ACCTCTTCCCCTTTCCCGGCGATAGAGAGAGCGACGCATACTCAAGGGCT
GGCGTGACTGCTCGAATTCCGAGGGTAGTTTGCACAGAAAGATGTTTGAT
CGCCTTTTGGCCCCTTGTTGCCCACTCCACGTGTTCAGGTACCTCATGAA
TGCAAAGGGGAATTGTAGTTGAAGCGGCTATAGTAGTGGTCAGCTGTGTA
TGTGACCACGATAAAGTTATAGTAGTCGTTAGGGAAGTAGCGTAG back to topCoding sequence (CDS) from alignment at KK037252.1:79311..80755- >rna9196 ID=rna9196|Name=rna9196|organism=Nannochloropsis gaditana|type=CDS|length=4968bp|location=Sequence derived from alignment at KK037252.1:79311..80755- (Nannochloropsis gaditana)
TGGTCAGCTGTGTATGTGACCACGATAAAGTTATAGTAGTCGTTAGGGAA
GTAGCGTAGGCAGAGTGTGACTGGCTCCCAGGGTAGCGGCAGAAACAGCA
TCGGCCCCTTGCGCACCGAGGGTGTGATAGTCGCGCGTGTCGTCGAGCGT
CTTCTCATTCGACACGAGGGGGCAGAGTCCGGCCCGCGTCGCACTTACCT
CTTCCCCTTTCCCGGCGATAGAGAGAGCGACGCATACTCAAGGGCTGGCG
TGACTGCTCGAATTCCGAGGGTAGTTTGCACAGAAAGATGTTTGATCGCC
TTTTGGCCCCTTGTTGCCCACTCCACGTGTTCAGGGTATGGGCACAGCTG
TGATAGGGGAGAGGCACCCGACGGGCCGCCAGGGAGTCGGTGTCGTGGTC
AGCGCGAGGGGGTTGTCTGGTTTCTATTAGCATTGGAGCACGTCGCACGG
TGTGATGTGGAGCTGTGTGAAGTCGGTGAGGGAACTTTATGCGCCGGTAT
GCGGACCTCGGCGTAGACGCCCTGGTCACGGACTTCCCCGAGCGCTTCGT
TGCAGTGCGACAGGAGGGAGAGGAGGCCCTGCGCGTCGCACAAAAGGCAG
CCGGGAGAGGCGGGGGGGTGGGAGAGGATGCGGAGGGTCGGGAGGGGAAG
GAAAGGGGTCGAGGCCCCGCCTGCGAGGAGGGGGGGGACGGCGCGTGGGC
GCAGGACCCGCGGGGGGTACCAGGGGCATCCTGCCAAGACGTGGCGGGTG
CGAGGGCGCTGCATCGCGAGTCTCAGGTCATGTCAGCCGCGTATCCTGGC
CCCCTCCATCAACCGCGCCGGCGCCTTGTCAAGGCGCTGCGCCACGCCTG
GCCCCTGCTCCGGGCCCTGGAAGGTCGATCACGGGATCCCACGGCCCGAT
GCAACGACGAGGAGAAGACCGGAGGGATGCTGCCAGCCTTGCTGGGGGAG
GGGACGAGGGAAGGCCCGGTCTGGCATTTGCAGCTGGCGGCGCGGCAAGC
GGAAGAGTCTGCGACAGCGGTATTGAAGCCCCGCTTGCCCCGACGTCGAC
GGGGCTGGACCCAGGCGGTGGACAGTGAGAGGGTCAGGAACGTGCAGGAA
TCCCTACCCACGACGCTCGAGAAGGGGGGGGCAAAGCGCGGTGGGCGAGG
GCAGGGGGGTTGGTCTTGTACGGAGGCTCCGGAGAGCTCGAAGGTCCTGG
ACCCGTTCCCCTTGTCGGCCACAGGAGAGGATGGGAAAGGCGTGGTCAGC
TGTGTATGTGACCACGATAAAGTTATAGTAGTCGTTAGGGAAGTAGCGTA
GGCAGAGTGTGACTGGCTCCCAGGGTAGCGGCAGAAACAGCATCGGCCCC
TTGCGCACCGAGGGTGTGATAGTCGCGCGTGTCGTCGAGCGTCTTCTCAT
TCGACACGAGGGGGCAGAGTCCGGCCCGCGTCGCACTTACCTCTTCCCCT
TTCCCGGCGATAGAGAGAGCGACGCATACTCAAGGGCTGGCGTGACTGCT
CGAATTCCGAGGGTAGTTTGCACAGAAAGATGTTTGATCGCCTTTTGGCC
CCTTGTTGCCCACTCCACGTGTTCAGGGTATGGGCACAGCTGTGATAGGG
GAGAGGCACCCGACGGGCCGCCAGGGAGTCGGTGTCGTGGTCAGCGCGAG
GGGGTTGTCTGGTTTCTATTAGCATTGGAGCACGTCGCACGGTGTGATGT
GGAGCTGTGTGAAGTCGGTGAGGGAACTTTATGCGCCGGTATGCGGACCT
CGGCGTAGACGCCCTGGTCACGGACTTCCCCGAGCGCTTCGTTGCAGTGC
GACAGGAGGGAGAGGAGGCCCTGCGCGTCGCACAAAAGGCAGCCGGGAGA
GGCGGGGGGGTGGGAGAGGATGCGGAGGGTCGGGAGGGGAAGGAAAGGGG
TCGAGGCCCCGCCTGCGAGGAGGGGGGGGACGGCGCGTGGGCGCAGGACC
CGCGGGGGGTACCAGGGGCATCCTGCCAAGACGTGGCGGGTGCGAGGGCG
CTGCATCGCGAGTCTCAGGTCATGTCAGCCGCGTATCCTGGCCCCCTCCA
TCAACCGCGCCGGCGCCTTGTCAAGGCGCTGCGCCACGCCTGGCCCCTGC
TCCGGGCCCTGGAAGGTCGATCACGGGATCCCACGGCCCGATGCAACGAC
GAGGAGAAGACCGGAGGGATGCTGCCAGCCTTGCTGGGGGAGGGGACGAG
GGAAGGCCCGGTCTGGCATTTGCAGCTGGCGGCGCGGCAAGCGGAAGAGT
CTGCGACAGCGGTATTGAAGCCCCGCTTGCCCCGACGTCGACGGGGCTGG
ACCCAGGCGGTGGACAGTGAGAGGGTCAGGAACGTGCAGGAATCCCTACC
CACGACGCTCGAGAAGGGGGGGGCAAAGCGCGGTGGGCGAGGGCAGGGGG
GTTGGTCTTGTACGGAGGCTCCGGAGAGCTCGAAGGTCCTGGACCCGTTC
CCCTTGTCGGCCACAGGAGAGGATGGGAAAGGCGTGGTCAGCTGTGTATG
TGACCACGATAAAGTTATAGTAGTCGTTAGGGAAGTAGCGTAGGCAGAGT
GTGACTGGCTCCCAGGGTAGCGGCAGAAACAGCATCGGCCCCTTGCGCAC
CGAGGGTGTGATAGTCGCGCGTGTCGTCGAGCGTCTTCTCATTCGACACG
AGGGGGCAGAGTCCGGCCCGCGTCGCACTTACCTCTTCCCCTTTCCCGGC
GATAGAGAGAGCGACGCATACTCAAGGGCTGGCGTGACTGCTCGAATTCC
GAGGGTAGTTTGCACAGAAAGATGTTTGATCGCCTTTTGGCCCCTTGTTG
CCCACTCCACGTGTTCAGGGTATGGGCACAGCTGTGATAGGGGAGAGGCA
CCCGACGGGCCGCCAGGGAGTCGGTGTCGTGGTCAGCGCGAGGGGGTTGT
CTGGTTTCTATTAGCATTGGAGCACGTCGCACGGTGTGATGTGGAGCTGT
GTGAAGTCGGTGAGGGAACTTTATGCGCCGGTATGCGGACCTCGGCGTAG
ACGCCCTGGTCACGGACTTCCCCGAGCGCTTCGTTGCAGTGCGACAGGAG
GGAGAGGAGGCCCTGCGCGTCGCACAAAAGGCAGCCGGGAGAGGCGGGGG
GGTGGGAGAGGATGCGGAGGGTCGGGAGGGGAAGGAAAGGGGTCGAGGCC
CCGCCTGCGAGGAGGGGGGGGACGGCGCGTGGGCGCAGGACCCGCGGGGG
GTACCAGGGGCATCCTGCCAAGACGTGGCGGGTGCGAGGGCGCTGCATCG
CGAGTCTCAGGTCATGTCAGCCGCGTATCCTGGCCCCCTCCATCAACCGC
GCCGGCGCCTTGTCAAGGCGCTGCGCCACGCCTGGCCCCTGCTCCGGGCC
CTGGAAGGTCGATCACGGGATCCCACGGCCCGATGCAACGACGAGGAGAA
GACCGGAGGGATGCTGCCAGCCTTGCTGGGGGAGGGGACGAGGGAAGGCC
CGGTCTGGCATTTGCAGCTGGCGGCGCGGCAAGCGGAAGAGTCTGCGACA
GCGGTATTGAAGCCCCGCTTGCCCCGACGTCGACGGGGCTGGACCCAGGC
GGTGGACAGTGAGAGGGTCAGGAACGTGCAGGAATCCCTACCCACGACGC
TCGAGAAGGGGGGGGCAAAGCGCGGTGGGCGAGGGCAGGGGGGTTGGTCT
TGTACGGAGGCTCCGGAGAGCTCGAAGGTCCTGGACCCGTTCCCCTTGTC
GGCCACAGGAGAGGATGGGAAAGGCGTGGTCAGCTGTGTATGTGACCACG
ATAAAGTTATAGTAGTCGTTAGGGAAGTAGCGTAGGCAGAGTGTGACTGG
CTCCCAGGGTAGCGGCAGAAACAGCATCGGCCCCTTGCGCACCGAGGGTG
TGATAGTCGCGCGTGTCGTCGAGCGTCTTCTCATTCGACACGAGGGGGCA
GAGTCCGGCCCGCGTCGCACTTACCTCTTCCCCTTTCCCGGCGATAGAGA
GAGCGACGCATACTCAAGGGCTGGCGTGACTGCTCGAATTCCGAGGGTAG
TTTGCACAGAAAGATGTTTGATCGCCTTTTGGCCCCTTGTTGCCCACTCC
ACGTGTTCAGGGTATGGGCACAGCTGTGATAGGGGAGAGGCACCCGACGG
GCCGCCAGGGAGTCGGTGTCGTGGTCAGCGCGAGGGGGTTGTCTGGTTTC
TATTAGCATTGGAGCACGTCGCACGGTGTGATGTGGAGCTGTGTGAAGTC
GGTGAGGGAACTTTATGCGCCGGTATGCGGACCTCGGCGTAGACGCCCTG
GTCACGGACTTCCCCGAGCGCTTCGTTGCAGTGCGACAGGAGGGAGAGGA
GGCCCTGCGCGTCGCACAAAAGGCAGCCGGGAGAGGCGGGGGGGTGGGAG
AGGATGCGGAGGGTCGGGAGGGGAAGGAAAGGGGTCGAGGCCCCGCCTGC
GAGGAGGGGGGGGACGGCGCGTGGGCGCAGGACCCGCGGGGGGTACCAGG
GGCATCCTGCCAAGACGTGGCGGGTGCGAGGGCGCTGCATCGCGAGTCTC
AGGTCATGTCAGCCGCGTATCCTGGCCCCCTCCATCAACCGCGCCGGCGC
CTTGTCAAGGCGCTGCGCCACGCCTGGCCCCTGCTCCGGGCCCTGGAAGG
TCGATCACGGGATCCCACGGCCCGATGCAACGACGAGGAGAAGACCGGAG
GGATGCTGCCAGCCTTGCTGGGGGAGGGGACGAGGGAAGGCCCGGTCTGG
CATTTGCAGCTGGCGGCGCGGCAAGCGGAAGAGTCTGCGACAGCGGTATT
GAAGCCCCGCTTGCCCCGACGTCGACGGGGCTGGACCCAGGCGGTGGACA
GTGAGAGGGTCAGGAACGTGCAGGAATCCCTACCCACGACGCTCGAGAAG
GGGGGGGCAAAGCGCGGTGGGCGAGGGCAGGGGGGTTGGTCTTGTACGGA
GGCTCCGGAGAGCTCGAAGGTCCTGGACCCGTTCCCCTTGTCGGCCACAG
GAGAGGATGGGAAAGGCG back to top
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