rna9190, rna9190 (mRNA) Nannochloropsis gaditana

Overview
Namerna9190
Unique Namerna9190
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1191
Alignment locationKK037252.1:63323..64633 -

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Properties
Property NameValue
Productgluconolactonase
Orig transcript idgnl|cribi|Naga_100317g1.5833.mrna
Orig protein idgnl|cribi|Naga_100317g1.5833
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:63323..64633 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100317g1gene8915Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21517.1cds9160Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9190rna9190-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9190 ID=rna9190|Name=rna9190|organism=Nannochloropsis gaditana|type=mRNA|length=1191bp
ATGAAGGGTAAAGCCAAACGCCGTCACGCTTTTTCTGGTACTCTACTTGT
GGTCGTCGGTATCGTGGGCACCGCTCAACTTGCTTTTGGCTTCGTTAGAT
CCACCTTTCTCGTCCATTTCAGGGACGCTCCTCCCTACCACAGGCGTCCC
ACGTCGCTTCGGGAGCACAGTCAAAGCGACACGCTGCCCTCAAAACTACT
TCTGCTCCACGTAGCCTATGATGGCAGCCAGTACAAGGTCTGGACGGACC
TCGATACTCCAGACAACCAACATCTTAAGGGTCAAAGACTCAAGAAACGG
AGCCGCCCTCCTCGGCGCACGCTTTCGTTGCATCACCGCCTCGGTACAAC
ACTCTCCATCATTCACAGTCACGTACCTCCACATTCCCTACAACTTACTC
CGGCTCTTTTAGTGACCGGGGGTGCCCACGCCGAATCGCAGCTTATCTCT
TACCGGCCGCCTGCCCTTCCTTTCAACGGAGACCTGAATCAGACCGCCCA
TGCCTTAAACAGGCTTTTGCCCGCCGATGTGAGGGTGCTGGAGGTGCTAT
TTCCCCCATGGGACAATTTTTGTATGCGTCGAGATCTGGTTAGCGTCACG
TATTCGTACACGATCATCCTCGGCGGGTTGGAAGACCCGACACTGCGGCA
CTACGCTCGGGTATACCACCATCAGAGGAAGGAATGGGTGGAGGAGGGGA
TTAAGAAGCTGCAAGCAATTTTTGGACGCTCAAATATGACGGCAGAGGAG
CTGCTTGGAAAAGGAGGGGAAAGGGATGCTGGGGCGGGGCAGAGGTTGCT
GAGTGCGACGATGGAGGCGGGGTGGGGACCAGGCATTGGTAAGGGCCGGG
CACGGCTAGCGCGGTTTGAGCTAGAGGTGGAGGGGGGGCGGTCCGAAAAT
CTTGATGACGACGAGAAAAGACAGACCATGGTAGTGGAGTGGGTGAACAC
GGTTGTTGGCGAGGTTTTTGGGGGGGAGAGGAAAGGGGTGGTTGGGACGG
TGGACAGGAGGCGGGGGGGTGAAAGGTCAGGTTTCAACGGCTTGGTCCTC
AAATCGTTACTTTTTCGCCAGCGAGGTGAAGAGAAGGTATTGTGGACACG
ACGCTCATTGGCTCGGAGGCAGGAAGGAGGGGAAAACCACAAGTGGGGGG
GGCATAGAGGCCTTTCTCCTCGGAGTAACATGAGGAGATGA
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protein sequence of rna9190

>rna9190-protein ID=rna9190-protein|Name=rna9190|organism=Nannochloropsis gaditana|type=polypeptide|length=436bp
MKLGNLLPPTDAYWATIFFPALLGYLVLLQAAMNRRPLLGSVERLQPSVL
NTLIAPDAQLEIIAEGNLWAEGPLWVSDEDSADGGFLLWSDVKKNLIYRW
EEGGGLFTIGRSVFLKESGCRPSLPPLASGGETETKDGNSSSDESCSDGI
CGDDGARCATLREPGSNGLTLEPGSGLVVMCEHGERRVSRLEANGSFTPL
ATHYQGRRLNSPNDLVFGPGGDLYFTDPPYGLNGLDADPARELESFGVYR
VSKEAMEQQVVSSARGSAEVQLVFDGLKRPNGLAFSPDFTHLYVGDSDAE
DPHWVVFEMDASTGLVKGKEGARVFADARAYQERDDAGGKTRIGNPDGLK
VDEDGNIWATGPGGVLIFSPQGERLGTILTGKKTGNVAFGGKEKSRGGKG
MFLYVCANDVVARIPILVRPAPSPPMKRVVEEASRS
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mRNA from alignment at KK037252.1:63323..64633-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9190 ID=rna9190|Name=rna9190|organism=Nannochloropsis gaditana|type=mRNA|length=1311bp|location=Sequence derived from alignment at KK037252.1:63323..64633- (Nannochloropsis gaditana)
ATGAAGCTTGGTAATCTTTTGCCCCCAACAGATGCATACTGGGCCACCAT TTTTTTCCCCGCCTTGCTTGGATATCTTGTGCTGCTTCAGGCTGCTATGA ATCGACGCCCTCTGTTGGGTAGTGTAGAACGCCTCCAACCGTCTGTCCTC AACACTTTAATCGCGCCAGACGCTCAGTTGGAAATTATTGCCGAGGGTAA TTTATGGGCAGAAGGTCCCTTGTGGGTGTCGGACGAGGACAGCGCAGACG GTGGGTTCTTGCTCTGGAGTGACGTCAAAAAGAATCTTATCTATCGGTGG GAGGAGGGTGGCGGTTTGTTCACCATCGGGAGGAGCGTCTTTTTGAAAGA GAGTGGATGTCGGCCGTCTCTGCCACCTCTCGCGTCAGGCGGCGAAACGG AGACGAAGGACGGCAACAGCAGCAGCGACGAGAGTTGCAGTGATGGTATC TGTGGAGATGACGGGGCTCGATGCGCCACTTTGAGAGAGCCGGGCTCCAA CGGGTTGACATTGGAGCCGGGATCGGGGCTGGTCGTCATGTGTGAGCATG GGGAGCGTCGGGTCTCGCGCCTGGAGGCAAACGGGAGCTTCACCCCTCTC GCTACCCACTACCAGGGCAGGCGGCTGAACTCGCCCAATGACCTGGTGTT CGGGCCGGGCGGTGACTTGTATTTCACTGACCCGCCGTACGGGTTGAATG GACTAGACGCGGACCCAGCGAGGGAGCTGGAAAGTTTCGGGGTATACCGG GTCTCCAAGGAGGCGATGGAGCAGCAGGTGGTCTCCTCGGCCAGGGGAAG CGCGGAGGTGCAACTGGTCTTTGATGGACTGAAGCGACCGAACGGTCTGG CCTTTTCCCCTGATTTCACACATCTATACGTGGGAGATAGCGACGCCGAG GACCCGCACTGGGTCGTGTTCGAGATGGATGCGAGCACAGGCCTGGTGAA AGGGAAGGAAGGCGCGCGTGTCTTTGCAGACGCTCGGGCTTACCAAGAGA GAGATGACGCTGGAGGCAAAACACGCATCGGCAATCCAGACGGCCTTAAA GTGGATGAAGATGGGAATATATGGGCCACAGGACCTGGGGGAGTTTTGAT TTTCTCTCCCCAGGGAGAGCGGCTGGGAACGATTTTGACGGGAAAAAAAA CGGGCAATGTTGCTTTTGGAGGAAAAGAGAAGTCCAGGGGAGGAAAGGGG ATGTTTTTGTACGTGTGTGCCAACGATGTTGTAGCTCGTATTCCGATATT GGTGAGGCCTGCGCCCTCCCCTCCCATGAAGCGAGTTGTCGAAGAGGCGT CTCGCTCTTGA
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Coding sequence (CDS) from alignment at KK037252.1:63323..64633-

>rna9190 ID=rna9190|Name=rna9190|organism=Nannochloropsis gaditana|type=CDS|length=1311bp|location=Sequence derived from alignment at KK037252.1:63323..64633- (Nannochloropsis gaditana)
ATGAAGCTTGGTAATCTTTTGCCCCCAACAGATGCATACTGGGCCACCAT
TTTTTTCCCCGCCTTGCTTGGATATCTTGTGCTGCTTCAGGCTGCTATGA
ATCGACGCCCTCTGTTGGGTAGTGTAGAACGCCTCCAACCGTCTGTCCTC
AACACTTTAATCGCGCCAGACGCTCAGTTGGAAATTATTGCCGAGGGTAA
TTTATGGGCAGAAGGTCCCTTGTGGGTGTCGGACGAGGACAGCGCAGACG
GTGGGTTCTTGCTCTGGAGTGACGTCAAAAAGAATCTTATCTATCGGTGG
GAGGAGGGTGGCGGTTTGTTCACCATCGGGAGGAGCGTCTTTTTGAAAGA
GAGTGGATGTCGGCCGTCTCTGCCACCTCTCGCGTCAGGCGGCGAAACGG
AGACGAAGGACGGCAACAGCAGCAGCGACGAGAGTTGCAGTGATGGTATC
TGTGGAGATGACGGGGCTCGATGCGCCACTTTGAGAGAGCCGGGCTCCAA
CGGGTTGACATTGGAGCCGGGATCGGGGCTGGTCGTCATGTGTGAGCATG
GGGAGCGTCGGGTCTCGCGCCTGGAGGCAAACGGGAGCTTCACCCCTCTC
GCTACCCACTACCAGGGCAGGCGGCTGAACTCGCCCAATGACCTGGTGTT
CGGGCCGGGCGGTGACTTGTATTTCACTGACCCGCCGTACGGGTTGAATG
GACTAGACGCGGACCCAGCGAGGGAGCTGGAAAGTTTCGGGGTATACCGG
GTCTCCAAGGAGGCGATGGAGCAGCAGGTGGTCTCCTCGGCCAGGGGAAG
CGCGGAGGTGCAACTGGTCTTTGATGGACTGAAGCGACCGAACGGTCTGG
CCTTTTCCCCTGATTTCACACATCTATACGTGGGAGATAGCGACGCCGAG
GACCCGCACTGGGTCGTGTTCGAGATGGATGCGAGCACAGGCCTGGTGAA
AGGGAAGGAAGGCGCGCGTGTCTTTGCAGACGCTCGGGCTTACCAAGAGA
GAGATGACGCTGGAGGCAAAACACGCATCGGCAATCCAGACGGCCTTAAA
GTGGATGAAGATGGGAATATATGGGCCACAGGACCTGGGGGAGTTTTGAT
TTTCTCTCCCCAGGGAGAGCGGCTGGGAACGATTTTGACGGGAAAAAAAA
CGGGCAATGTTGCTTTTGGAGGAAAAGAGAAGTCCAGGGGAGGAAAGGGG
ATGTTTTTGTACGTGTGTGCCAACGATGTTGTAGCTCGTATTCCGATATT
GGTGAGGCCTGCGCCCTCCCCTCCCATGAAGCGAGTTGTCGAAGAGGCGT
CTCGCTCTTGA
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Synonyms
Publications