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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100650g2.1642.mrna |
| Orig protein id | gnl|cribi|Naga_100650g2.1642 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:7100..9147 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9172 ID=rna9172|Name=rna9172|organism=Nannochloropsis gaditana|type=mRNA|length=609bp
ATGTCCCGTTTTCATGCATTGGACAATGCGGTATCAGAGGCCTTTCTGGC
CGCGGGAGGGATGGTTCACTCGGCAGTGGAGCAATCCCTTTTGGGTATCG
CCTGCATCTGGGAGGCCGTGAGAGAAGCTGGGCACGGACCTGCTGTTAAA
TCATCCCTTGTGCCCGCGGATCCCACCGACAGTACTAAGATTGCTGGGGG
CGACGCCTCTATTGAACACGAAGACCTGAGTGCGGCAGCAAACGACATGG
GAACCAAAGGGCAGGCGGAGGAGGACAAAGTGGCCGTGCACATGACAATG
GAAGAAAGGCAGGACAAGAAGGAGAACGGGGTACTCAATGGGGAGAAAGA
AGATGGGAGTGCACGCTCCGCCCCCGACCTGGATCGCAAGCAATCGTTTC
TCGAGCGCATGGGCCGGAAGATGTCTCGACGTGGGGAGACCCCTGCTCCC
TCCCCCTCCCCATCCCCTCTCCTCCCTTTCCCTCCTGGTGATTCGCCGGC
GTCTACGAGCAGCGACGGGAAGAAGAGGAGGCCCTTTTCTTTCGGGGGGG
GTCGGTCCGACAGCATCAAATCGTTCAAACTGAAGCGAAACGGTCTCGAT
TGGCGGTAA back to topprotein sequence of rna9172 >rna9172-protein ID=rna9172-protein|Name=rna9172|organism=Nannochloropsis gaditana|type=polypeptide|length=583bp
MADSGASMSPVSSSPPMSDPGQSPSPVLCPAASPSQTCPTPTSMKHCQDS
PSHSSASESSSSQPGSSPAQPDASPRREQDPLHPQQEQRQHVQALEAQLL
KFKRLLTMSRERLEENQRHLAEKTQTIDRLSKEVESTRQQWRQTEAIAAS
KAQAALEATTALKELQQQLNQQQQEMKDVEKEAKHGKGGSIRRKLAPDKQ
GKQSPKPTLPAYPRRSLLYVEHGGTHWVLFDYHDPVSHKSGAQNQENGCP
SPSPSQAVWRAFPARSDLDAFLLQVPGSEPLLLPAPCLPAAQASLLQAQA
QAQVEKALEELRCGEDDRPPFLPPSLPPRPDPPSFPPHSRKYRVRTELAV
RQKDMEIQQLSAQLLASQQDRIQHQGPTEEELRRTLKAQADTLQALRAEL
RDQEEKWKGQYERLRKEKAGLEAAGAETGLALQWRRRYEELLQEREREGK
REGGGHRMSFSGSGPVEEKYTELKEEYRLYRKKALETLREKDNLIATLDG
EGERRGERRGERADGLEGGTLVYLKNLTEKYFSSGCEEIKEHTERAICTV
LGFDEEEVKRMKEARGGGGGGAWGNSLFGGGGR back to topmRNA from alignment at KK037252.1:7100..9147+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9172 ID=rna9172|Name=rna9172|organism=Nannochloropsis gaditana|type=mRNA|length=2048bp|location=Sequence derived from alignment at KK037252.1:7100..9147+ (Nannochloropsis gaditana)
GTACAGACACACAAGAGGTCCATGGCGGACAGTGGCGCCTCCATGAGTCC
ggtgtcctcctctccgcccatGTCTGACCCAGGACAGTCCCCTTCGCCAG
TCCTTTGCCCCGCAGCATCTCCATCCCAAACATGTCCGACACCCACATCC
ATGAAACATTGTCAAGATTCTCCGTCACACTCATCAGCCTCCGAATCATC
GTCGTCGCAACCAGGCTCCTCGCCAGCACAGCCTGACGCTTCACCTCGTC
GAGAACAAGACCCACTACACCCGCAACAAGAACAACGACAGCATGTTCAA
GCTCTGGAAGCGCAGCTCTTGAAATTCAAACGACTCTTGACCATGTCCCG
GGAACGCCTGGAAGAAAATCAACGGCACTTGGCGGAAAAAACGCAAACCA
TCGACCGGCTTTCCAAAGAGGTGGAAAGCACGCGACAGCAATGGAGACAG
ACAGAGGCTATtgcggcctccaaggcaCAGGCGGCCCTAGAGGCGACGAC
AGCACTGAAAGAATTGCAGCAACAGCTGaaccaacagcagcaggaaatga
aggacgtggaaaaggaagccaagcatgggaagggaggctcCATTCGACGG
AAACTCGCCCCGGACAAGCAAGGCAAGCAGAGTCCAAAGCCGACGCTCCC
AGCATATCCGCGCCGCAGCTTGCTCTATGTGGAGCACGGGGGAACGCATT
GGGTCCTTTTTGACTACCACGACCCCGTCTCCCACAAATCCGGGGCCCAG
AACCAGGAGAAtggctgcccctccccctccccctcgcagGCGGTGTGGAG
GGCCTTCCCCGCCAGGAGCGACCTggacgctttcctcctgcaggtTCCTG
GCTCCgagcctcttctcctcccggccccctgCCTTCCGGCCGCGCAagcc
tctctcctccaggcccaggCGCAAGCTCAGGTCGAGAAAGCCCTGGAAGA
ACTACGGTGCGGCGAGGACGAccgacctcccttcctccctccctccctcc
ctccccgtcctgacccaccttctttcccaccccatTCCAGAAAATACCGA
GTGCGGACGGAGCTTGCCGTCCGCCAGAAAGACATGGAAATACAGCAGTT
GTCTGCTCAGCTATTGGCGTCACAACAGGACCGGATTCAGCATCAGGGCC
CaaccgaggaggagctgagacGGACCCTCAAAGCCCAGGTaggccttccc
tccctccctccctccctcccttccttccttccttccttccgcctaTCCGT
AATTCCTCCTGTCTGTGTCGACATCTacactttctccctcgtccttccct
ccgcggccgccacaCGATGTATCCATATTCCACGTatctccccttctccg
tcctttccccttcgcgGGCTTCTCAAACCGCTTTCCTCGattcccccttt
ccctccctccctccctccctccctttttcggcccctcccgtcctatttcc
ttcatttccccagGCCGACACCCTTCAGGCCCTCCGTGCCGAGTTGAGGG
ATCAGGAAGAAAAGTGGAAGGGGCAGTACGAGCGTCtgcggaaagagaag
gcagggCTGGAGGCCGCCGGGGCTGAGACGGGCCTCGCCCTTcagtggcg
gcggcggtacGAAGAGCTCttgcaggagagggagagggagggaaaaaggg
agggaggggggcaccgCATGAGTTTCTCGGGATCGGGgcccgtggaggag
aagtacacggagttgaaggaggagtacCGCCTGTACAGAAAGAAAGCTCT
AGAGACTttgcgggagaaggacaatTTGATCGCCACgctggatggggagg
gggagaggaggggggagaggaggggggagagggcagatgggctggaggga
gggacgttgGTGTACTTGAAGAACTTGACCGAAAAGTATTTTAGCAGCGG
TTGCGAGGAGATCAAGGAGCACACCGAAAGGGCGATATGCACGGTATTGG
GGttcgatgaggaggaggtgaagaggatgaaagaggcgagaggaggggga
ggaggaggggcgtgggggaaCAGCTTgttcggggggggagggcgttga back to topCoding sequence (CDS) from alignment at KK037252.1:7100..9147+ >rna9172 ID=rna9172|Name=rna9172|organism=Nannochloropsis gaditana|type=CDS|length=3504bp|location=Sequence derived from alignment at KK037252.1:7100..9147+ (Nannochloropsis gaditana)
ATGGCGGACAGTGGCGCCTCCATGAGTCCggtgtcctcctctccgcccat
GTCTGACCCAGGACAGTCCCCTTCGCCAGTCCTTTGCCCCGCAGCATCTC
CATCCCAAACATGTCCGACACCCACATCCATGAAACATTGTCAAGATTCT
CCGTCACACTCATCAGCCTCCGAATCATCGTCGTCGCAACCAGGCTCCTC
GCCAGCACAGCCTGACGCTTCACCTCGTCGAGAACAAGACCCACTACACC
CGCAACAAGAACAACGACAGCATGTTCAAGCTCTGGAAGCGCAGCTCTTG
AAATTCAAACGACTCTTGACCATGTCCCGGGAACGCCTGGAAGAAAATCA
ACGGCACTTGGCGGAAAAAACGCAAACCATCGACCGGCTTTCCAAAGAGG
TGGAAAGCACGCGACAGCAATGGAGACAGACAGAGGCTATtgcggcctcc
aaggcaCAGGCGGCCCTAGAGGCGACGACAGCACTGAAAGAATTGCAGCA
ACAGCTGaaccaacagcagcaggaaatgaaggacgtggaaaaggaagcca
agcatgggaagggaggctcCATTCGACGGAAACTCGCCCCGGACAAGCAA
GGCAAGCAGAGTCCAAAGCCGACGCTCCCAGCATATCCGCGCCGCAGCTT
GCTCTATGTGGAGCACGGGGGAACGCATTGGGTCCTTTTTGACTACCACG
ACCCCGTCTCCCACAAATCCGGGGCCCAGAACCAGGAGAAtggctgcccc
tccccctccccctcgcagGCGGTGTGGAGGGCCTTCCCCGCCAGGAGCGA
CCTggacgctttcctcctgcaggtTCCTGGCTCCgagcctcttctcctcc
cggccccctgCCTTCCGGCCGCGCAagcctctctcctccaggcccaggCG
CAAGCTCAGGTCGAGAAAGCCCTGGAAGAACTACGGTGCGGCGAGGACGA
ccgacctcccttcctccctccctccctccctccccgtcctgacccacctt
ctttcccaccccatTCCAGAAAATACCGAGTGCGGACGGAGCTTGCCGTC
CGCCAGAAAGACATGGAAATACAGCAGTTGTCTGCTCAGCTATTGGCGTC
ACAACAGGACCGGATTCAGCATCAGGGCCCaaccgaggaggagctgagac
GGACCCTCAAAGCCCAGGCCGACACCCTTCAGGCCCTCCGTGCCGAGTTG
AGGGATCAGGAAGAAAAGTGGAAGGGGCAGTACGAGCGTCtgcggaaaga
gaaggcagggCTGGAGGCCGCCGGGGCTGAGACGGGCCTCGCCCTTcagt
ggcggcggcggtacGAAGAGCTCttgcaggagagggagagggagggaaaa
agggagggaggggggcaccgCATGAGTTTCTCGGGATCGGGgcccgtgga
ggagaagtacacggagttgaaggaggagtacCGCCTGTACAGAAAGAAAG
CTCTAGAGACTttgcgggagaaggacaatTTGATCGCCACgctggatggg
gagggggagaggaggggggagaggaggggggagagggcagatgggctgga
gggagggacgttgGTGTACTTGAAGAACTTGACCGAAAAGTATTTTAGCA
GCGGTTGCGAGGAGATCAAGGAGCACACCGAAAGGGCGATATGCACGGTA
TTGGGGttcgatgaggaggaggtgaagaggatgaaagaggcgagaggagg
gggaggaggaggggcgtgggggaaCAGCTTgttcggggggggagggcgtt
gaATGGCGGACAGTGGCGCCTCCATGAGTCCggtgtcctcctctccgccc
atGTCTGACCCAGGACAGTCCCCTTCGCCAGTCCTTTGCCCCGCAGCATC
TCCATCCCAAACATGTCCGACACCCACATCCATGAAACATTGTCAAGATT
CTCCGTCACACTCATCAGCCTCCGAATCATCGTCGTCGCAACCAGGCTCC
TCGCCAGCACAGCCTGACGCTTCACCTCGTCGAGAACAAGACCCACTACA
CCCGCAACAAGAACAACGACAGCATGTTCAAGCTCTGGAAGCGCAGCTCT
TGAAATTCAAACGACTCTTGACCATGTCCCGGGAACGCCTGGAAGAAAAT
CAACGGCACTTGGCGGAAAAAACGCAAACCATCGACCGGCTTTCCAAAGA
GGTGGAAAGCACGCGACAGCAATGGAGACAGACAGAGGCTATtgcggcct
ccaaggcaCAGGCGGCCCTAGAGGCGACGACAGCACTGAAAGAATTGCAG
CAACAGCTGaaccaacagcagcaggaaatgaaggacgtggaaaaggaagc
caagcatgggaagggaggctcCATTCGACGGAAACTCGCCCCGGACAAGC
AAGGCAAGCAGAGTCCAAAGCCGACGCTCCCAGCATATCCGCGCCGCAGC
TTGCTCTATGTGGAGCACGGGGGAACGCATTGGGTCCTTTTTGACTACCA
CGACCCCGTCTCCCACAAATCCGGGGCCCAGAACCAGGAGAAtggctgcc
cctccccctccccctcgcagGCGGTGTGGAGGGCCTTCCCCGCCAGGAGC
GACCTggacgctttcctcctgcaggtTCCTGGCTCCgagcctcttctcct
cccggccccctgCCTTCCGGCCGCGCAagcctctctcctccaggcccagg
CGCAAGCTCAGGTCGAGAAAGCCCTGGAAGAACTACGGTGCGGCGAGGAC
GAccgacctcccttcctccctccctccctccctccccgtcctgacccacc
ttctttcccaccccatTCCAGAAAATACCGAGTGCGGACGGAGCTTGCCG
TCCGCCAGAAAGACATGGAAATACAGCAGTTGTCTGCTCAGCTATTGGCG
TCACAACAGGACCGGATTCAGCATCAGGGCCCaaccgaggaggagctgag
acGGACCCTCAAAGCCCAGGCCGACACCCTTCAGGCCCTCCGTGCCGAGT
TGAGGGATCAGGAAGAAAAGTGGAAGGGGCAGTACGAGCGTCtgcggaaa
gagaaggcagggCTGGAGGCCGCCGGGGCTGAGACGGGCCTCGCCCTTca
gtggcggcggcggtacGAAGAGCTCttgcaggagagggagagggagggaa
aaagggagggaggggggcaccgCATGAGTTTCTCGGGATCGGGgcccgtg
gaggagaagtacacggagttgaaggaggagtacCGCCTGTACAGAAAGAA
AGCTCTAGAGACTttgcgggagaaggacaatTTGATCGCCACgctggatg
gggagggggagaggaggggggagaggaggggggagagggcagatgggctg
gagggagggacgttgGTGTACTTGAAGAACTTGACCGAAAAGTATTTTAG
CAGCGGTTGCGAGGAGATCAAGGAGCACACCGAAAGGGCGATATGCACGG
TATTGGGGttcgatgaggaggaggtgaagaggatgaaagaggcgagagga
gggggaggaggaggggcgtgggggaaCAGCTTgttcggggggggagggcg
ttga back to top
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