rna9154, rna9154 (mRNA) Nannochloropsis gaditana

Overview
Namerna9154
Unique Namerna9154
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length243
Alignment locationKK037251.1:452133..453709 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100564g8.6263.mrna
Orig protein idgnl|cribi|Naga_100564g8.6263
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:452133..453709 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100564g8gene8879Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21553.1cds9124Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9154rna9154-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9154 ID=rna9154|Name=rna9154|organism=Nannochloropsis gaditana|type=mRNA|length=243bp
ATGGGAGGCAGGCAGAGGTCTGCTGGGAGGAATAAGAAAGACGGCAAGAC
GCCGAGTAGACATTGTGTGCAGAGCGCACCACAGTCGCACAAGAAAAGCA
TCGAAGCAAAGCTTTCAATACGGGGCCACGAGTCTGCAACAAAGCGAGGG
CGATCAAGCCGTGGAGGTGCTGGTGACAGCCTCGAGCACGCGCGGCCCAT
GTCGTGTCAAAAACGAATTTATTTTTTTTCCTTTGTGGTGTGA
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protein sequence of rna9154

>rna9154-protein ID=rna9154-protein|Name=rna9154|organism=Nannochloropsis gaditana|type=polypeptide|length=249bp
FQAKKGFVTQYPAFLSQASASAPPTRRRDVLAAYCQHPASLFASATPFPP
PSPGAPPAHARASYRIEGGQEEGLVHLRIEAGGQGGERRHSSSMKRTYRL
SGSVTEGRGPTPSALASPILPSSARGWFAFASSLLIKPSRALLAAVRQRL
DPAPPLGRGGEDGAEGEEDVYLPREEPRDVVAHKASRMWCGLLLLAYGLL
MLMSLPGSRRRFQERLRRGGGSMRALALERSKHEWDAYLRKTMATTAHR
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mRNA from alignment at KK037251.1:452133..453709-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9154 ID=rna9154|Name=rna9154|organism=Nannochloropsis gaditana|type=mRNA|length=1577bp|location=Sequence derived from alignment at KK037251.1:452133..453709- (Nannochloropsis gaditana)
TTCCAGGCCAAGAAAGGCTTCGTCACCCAGTACCCCGCCTTCCTTAGCCA
AGCTTCTGCCTCGGCGCCCCCCACGCGGCGAAGAGACGTCTTGGCTGCCT
ACTGCCAGCACCCAGCCTCCCTCTTCGCCTCCGCCACGCCCTTCCCCCCG
CCCTCCCCCGGTGCGCCCCCCGCGCACGCACGCGCTTCCTACAGGATAGA
GGGCGGGCAGGAAGAAGGGTTGGTGCACCTGCGTATCGAGGCGGGGGGGC
AGGGCGGGGAAAGGAGACACAGCTCCTCGATGAAAAGGACCTACCGACTG
TCAGGATCCGTCACCGAGGGCAGGGGGCCCACTCCCTCCGCCCTGGCCTC
CCCCATCCTCCCTTCCTCCGCCCGGGGCTGGTTTGCCTTCGCCTCCTCCC
TCCTCATCAAGCCCTCCCGCGCCCTGCTCGCTGCCGTCCGTCAGCGCCTC
GACCCCGCTCCCCCCTTGGGACGGGGAGGGGAGGACGGGGCGGAGGGGGA
GGAAGACGTCTACCTCCCTCGGGAGGAGCCCCGGGACGTGGTGGCCCACA
AGGCGTCTCGGATGTGGTGCGGCCTCTTGTTGTTAGCCTATGGTCTCTTG
ATGCTCATGTCCCTTCCCGGGAGCCGCCGGCGGTTCCAGGAACGGCTGCG
ACGGGGGGGAGGCTCGATGCGGGCATTGGCCTTGGAACGGAGCAAGCACG
AGTGGGACGCATACCTGCGGAAGACGATGGCGACGACGGCGCATCGTTAA
ATGTAGAGAAAGGGGGAGGAGGGGAAGGGAAATGCGTGGAGGCGTGGGTG
AGAGGGGGGGTAGGGACGTTCACTCTTTGGAGTGATGCGGAGGGAAGGAG
GGCGGCCGACGTCGGTGTGACGAGTGGGACTGCGGACACGAAAAGCCTCA
GGAAGAGAGGCAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGATAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGCCACCTCGCCTTGGAGCGT
GGGATGTGATTGAGTATGACAAGGGTACGGACGGCAGGGGGGGAGATGGA
AGCCCCCCCTCCGTCCGGCCCATTTTTGAGGGAAGAAGGACGGGTGATGC
ATGAATGAGTGTTGTTTCTCGTCCCGAGGGGACGTAGGATCGAGGCAATG
CTTTAGAAAGCCTGCTTGGATAGACGATGTAGGGGCCGTGGGGATTGGGG
GGGGGGGGGACGTAGAGATTATGAGGTCGACGAAGAGAGAGAGGACGTGT
ACAGATAGTCAGCTGCTCCCGGGCCTAGTGGAGGGAAACTAACCGGCATA
GGAAAAAGACTGAAGCCACAACCATAAGAAAGGGAGGGAGGGAAAGATGC
GTGGTGGTGATGGAGGAGACTGGGAGGAAGGGAGGCGCACCGAGGGAGGG
ATCCCTCTCGGCCTTCAAAATTCTTTCAGTCGTCCCCATTGACCCGCCTC
CGCCTCTCGTCTCACCGCACAAGCACAGTAAGTTAGTCAGGGTGATGAGC
ATGCTCACACCACAAAGGAAAAAAAATAAATTCGTTTTTGACACGACATG
GGCCGCGCGTGCTCGAGGCTGTCACCA
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Coding sequence (CDS) from alignment at KK037251.1:452133..453709-

>rna9154 ID=rna9154|Name=rna9154|organism=Nannochloropsis gaditana|type=CDS|length=750bp|location=Sequence derived from alignment at KK037251.1:452133..453709- (Nannochloropsis gaditana)
TTCCAGGCCAAGAAAGGCTTCGTCACCCAGTACCCCGCCTTCCTTAGCCA
AGCTTCTGCCTCGGCGCCCCCCACGCGGCGAAGAGACGTCTTGGCTGCCT
ACTGCCAGCACCCAGCCTCCCTCTTCGCCTCCGCCACGCCCTTCCCCCCG
CCCTCCCCCGGTGCGCCCCCCGCGCACGCACGCGCTTCCTACAGGATAGA
GGGCGGGCAGGAAGAAGGGTTGGTGCACCTGCGTATCGAGGCGGGGGGGC
AGGGCGGGGAAAGGAGACACAGCTCCTCGATGAAAAGGACCTACCGACTG
TCAGGATCCGTCACCGAGGGCAGGGGGCCCACTCCCTCCGCCCTGGCCTC
CCCCATCCTCCCTTCCTCCGCCCGGGGCTGGTTTGCCTTCGCCTCCTCCC
TCCTCATCAAGCCCTCCCGCGCCCTGCTCGCTGCCGTCCGTCAGCGCCTC
GACCCCGCTCCCCCCTTGGGACGGGGAGGGGAGGACGGGGCGGAGGGGGA
GGAAGACGTCTACCTCCCTCGGGAGGAGCCCCGGGACGTGGTGGCCCACA
AGGCGTCTCGGATGTGGTGCGGCCTCTTGTTGTTAGCCTATGGTCTCTTG
ATGCTCATGTCCCTTCCCGGGAGCCGCCGGCGGTTCCAGGAACGGCTGCG
ACGGGGGGGAGGCTCGATGCGGGCATTGGCCTTGGAACGGAGCAAGCACG
AGTGGGACGCATACCTGCGGAAGACGATGGCGACGACGGCGCATCGTTAA
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Synonyms
Publications