rna9153, rna9153 (mRNA) Nannochloropsis gaditana

Overview
Namerna9153
Unique Namerna9153
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length591
Alignment locationKK037251.1:451963..452205 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100564g6.6261.mrna
Orig protein idgnl|cribi|Naga_100564g6.6261
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:451963..452205 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100564g6gene8878Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9153rna9153-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21551.1cds9123Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9153 ID=rna9153|Name=rna9153|organism=Nannochloropsis gaditana|type=mRNA|length=591bp
ATGACGGTCGGGGTGGAGTACGGACTCAAGTCGGCAACCGTCAGAGACCA
AAACATACAAATCGAGATCTGGGATACCGCAGGGCAGGAAGCTTACATGT
CCCTAACAAACAGTTACTACCGCAACGCGGACGGCTGCCTGATCGTCTTC
GACTTGACCCAACGCGAGAGCTTCGAGAAGGTGTCCAAATGGGCCGAACA
CGCGCGCCAGTACAGCAACAATCCCCACCTGGTCTTTACCCTGGTCGGGA
ATAAAGCCGACCAAGCGGCCCTCCGACAGGTGGCGCGGGAAGAAGCAGAA
GCAGTGGCGGCACACCAGGGCATGGAATACCGGGAGGTAACGGCCAAGGA
CCACACGGCCGTCCAGGGTCTTTTCCAGACGACGGCAGAGAGAATCTTTC
AAGCCTTCGAGACGGGGGCAGGGCTCAAGGGAGGGATGGGGGGAAGCGAC
ATCGTAATCGATGGGGCCGGGAAAATCCGACTGCGCTCTTTCAATTCCTC
CCTCTCTTCCTCTGCCTTCGGCCTGTCGCCAGGGAGGTCCGCCCGGTCCC
AAGAAATGGCGGGAAACAGTGGGAAGGGGAGGTGTTGTTAA
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protein sequence of rna9153

>rna9153-protein ID=rna9153-protein|Name=rna9153|organism=Nannochloropsis gaditana|type=polypeptide|length=80bp
MGGRQRSAGRNKKDGKTPSRHCVQSAPQSHKKSIEAKLSIRGHESATKRG
RSSRGGAGDSLEHARPMSCQKRIYFFSFVV
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mRNA from alignment at KK037251.1:451963..452205+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9153 ID=rna9153|Name=rna9153|organism=Nannochloropsis gaditana|type=mRNA|length=243bp|location=Sequence derived from alignment at KK037251.1:451963..452205+ (Nannochloropsis gaditana)
ATGGGAGGCAGGCAGAGGTCTGCTGGGAGGAATAAGAAAGACGGCAAGAC
GCCGAGTAGACATTGTGTGCAGAGCGCACCACAGTCGCACAAGAAAAGCA
TCGAAGCAAAGCTTTCAATACGGGGCCACGAGTCTGCAACAAAGCGAGGG
CGATCAAGCCGTGGAGGTGCTGGTGACAGCCTCGAGCACGCGCGGCCCAT
GTCGTGTCAAAAACGaatttattttttttcctttgtggTGTGA
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Coding sequence (CDS) from alignment at KK037251.1:451963..452205+

>rna9153 ID=rna9153|Name=rna9153|organism=Nannochloropsis gaditana|type=CDS|length=243bp|location=Sequence derived from alignment at KK037251.1:451963..452205+ (Nannochloropsis gaditana)
ATGGGAGGCAGGCAGAGGTCTGCTGGGAGGAATAAGAAAGACGGCAAGAC
GCCGAGTAGACATTGTGTGCAGAGCGCACCACAGTCGCACAAGAAAAGCA
TCGAAGCAAAGCTTTCAATACGGGGCCACGAGTCTGCAACAAAGCGAGGG
CGATCAAGCCGTGGAGGTGCTGGTGACAGCCTCGAGCACGCGCGGCCCAT
GTCGTGTCAAAAACGaatttattttttttcctttgtggTGTGA
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Synonyms
Publications