rna9129, rna9129 (mRNA) Nannochloropsis gaditana

Overview
Namerna9129
Unique Namerna9129
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2601
Alignment locationKK037251.1:401271..401504 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g80.1899.mrna
Orig protein idgnl|cribi|Naga_100012g80.1899
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:401271..401504 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100012g80gene8852Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9129rna9129-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21567.1cds9099Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9129 ID=rna9129|Name=rna9129|organism=Nannochloropsis gaditana|type=mRNA|length=2601bp
ATGGAAGGGCTGCCCTGTCATCCTCCAGCTGCTACAGCCTCAAGTAGTAC
AAACCGGGATACTAATCACCCGGGGAATATTCACGAGAAAGATTCTCTAC
GAAATTTGTCGACGGATTGGAAACAACGCTTGGAAGAGCGCGGCGCTCCA
TCACTGATGCATTGTGTGGGCGACACCACAAATGCATCCCTGTCGCTTGG
ATCCTTTCTCGTTTTTATTGAAGGCTCACAGCGAAAGCAGCAAAGGACTG
ATGGTGCTGGTGCTCTCCAGGACCCGCGGCTGAACGCATCCAGAAAAATA
AAAAGTTTGGCGCACCTCCCAGGCTACGAAAGCGTACAAATATATGAGAC
GTTGGGAAGATTACGCCTCTATCGCCATGCTCCAAGAAATTTTTTTCATC
GAAGTCTCGCAACAGGAACGAGAACCGACGGAGACAAAGTTAAAGATGCC
TACGGGGACTCGTACTTTGGGCGGCAAAGTGGTCATCGGCAAGCGAGCGA
CAAAGGTGGACGCGCAGCCAAAAGTGGGAGAGACAACGAGAGAAGTTACA
AAGCAGAAAGACTGGAGGGGGGATCTGGAGATGCTGCGCACGAGGATGAG
TGGCATTTCCTTCCTTTTCGGCCCGCACGTTTGTTCACTGTCCTCCTACT
AGACTGCCAAAACACGGACTGTGCCAGCGGCTTCAATTATGCTAATGCCA
AAGAACAGCATGATGGTACGCAACTCCCAGATATTCATCTTGAGTCAGGG
CACCTTCCAGAACAATCCTGTCATGCCGTGCATGCTGTATCCGCGCGGCA
AATCCTGCAAAGCCTAACAGAGATGGCCCCTCGGATCAGATTCATCCAAA
TAGTGCGGGACGAGGTGCACCGTAGAGTCCATGCACTGATCACGGTGGAT
TCAATTCTGGCGGTGGACAGGTTGATAGCCTTTCTTCGGGAGCCGGATGC
ATTACTCCAAGGGCAGATCCTATTCGTCTCAAGCATCGTTCTGGTGAACG
ACCAAAAAAGTGAGGAATTGCTTTCTTCCCTCGACCTAGTCATTAAAGAT
GTCACGGGAAGCAGAACATGCGTCCAAGAGACTTCTTTCATGCAAAGCAA
GAAAAGCGACCCGTTGAATATCGCACATCTGTCTCATTTAGACACAGTAC
AGCTCCGGGGGCCTCACGAAAAGGACATATGCCCTGTGTATTCTTTGGTC
TTTGGCGATTATTTGGATGCTTTGGCCCTTTCACAATCGCTCATCCTGTC
GGTCAGAGATGCAGGGTTTATCAGTGAGGATTTGTTTGGCCGAAACCTTC
AGATGCAACCGGAAGGCGGCGAGATGCAAAGCATTAGTTTGAACATCAAA
AACGATTCCAACATCGAAGGGGATGAAGAAGATGAATATGATAACATCGA
TTTATTCTCACGGGGGTTGTTATGCTATCTAGCGGAATTGCCAACCTGTC
ATGGGTGCTTAAGCCGGCTCGATCCTGTTTCTGTGGGGACCTATTTGGGA
CCTGCGCGTTCGGATGACAAGTTTTCATCAATCCAGGAATGTGACACAGG
CGTTGAAATTTCGGGAAAGATATCTGGTTCTCAAGAATACTCCGCAGGGA
AAAGGTCACCAAGCCGTAAGTCTTCTTCGATGTGTCGCATATGCAACAAA
GTCCAAATACATGCGATGAACCAGGAGAAATGTAACTTTCAAAGGTCCAA
AAAAGAAGGGACGCCGGATACTGCTTTCAATGGAAGCAAAATGGTAACAC
CTGTGTCTCTGACATGTTACACTTGTAATATACCTGAAAATCTCTGGATT
TGTTTATTATGCGGCCATGTGGGATGTGGACGGTACACGGCAGAGCATGC
CAAGCGACACTTCCACTGTTGCGGTCATATTTTTAGTCTGGAGCTCGCAA
CAGGTAGAGTTTGGGATTACGTAGAAGACATGTTTGTGCATTCTTCAGAG
TTTGAGCCTGGTGGAGGACTTTCTCCGACCTCAGCACTCAGCGAAAGTCA
TGCAATAGCGGACCGGATTCATGGTTATCGAGAAGACAATTTACACGAAG
TATCTTGCAGAAAAGTTAAAGGTGCGCGAGGTAAATTTGATGGCCTGGAG
GCAGAATATAGTGCTCTCCTTTTGTCCCAGCTGGAAGAGCAGAATGCTTA
CCATGAAAGGCTTTTAACCAAGGCTGCTACAGATTTTGCTCAGAATATTT
GCCAGGATGATGAGCTTTCCGATGACGAAAGACGGGAGGCATTCAAAATC
CGAAGTGACATACAAAAAATGGAGGAGGATCATTCGTGCTTCATGGAAGA
GTTGCGTAGGGCAGAAGAATCGGCGCGTAAAATGAGAGTGCGCAACCAGG
AGCTACTGTGCGATCAAAAGGAGGGCAAATTTCATCTGTCGAATTTACGC
AGTAATATTACAAGCGCTAAGATCAGACAAAAACATGATATTCAGGAGCT
GGAGGCACAGATCAGTGATTTGTTGTTCTTCTTGCGCTCAAAAGAGGCCG
TACAATCGTCCGAACTTGAAGGGGGAGACTTGATAGTCCAGGGATTGACG
GCTAATCCTCATCGGGTGTCCAAGCATGGGCGAAGGAGGAGAAATCGGTA
G
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protein sequence of rna9129

>rna9129-protein ID=rna9129-protein|Name=rna9129|organism=Nannochloropsis gaditana|type=polypeptide|length=77bp
MPASFPSPEHPPKQPRYQALLNSKFGRALVLAEVATLAGTGVLYYTLTTS
EDARNKLAYRMPWVMDVFHKVTQDKYK
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mRNA from alignment at KK037251.1:401271..401504+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9129 ID=rna9129|Name=rna9129|organism=Nannochloropsis gaditana|type=mRNA|length=234bp|location=Sequence derived from alignment at KK037251.1:401271..401504+ (Nannochloropsis gaditana)
ATGCCGGCTTCATTTCCTAGTCCTGAGCATCCACCTAAGCAGCCGAGGTA
TCAAGCCTTGTTGAACAGCAAGTTTGGGCGAGCACTGGTACTTGCCGAGG
TAGCCACACTCGCGGGAACAGGGGTCCTATACTATACTCTCACGACAAGC
GAGGACGCAAGAAACAAACTTGCCTATCGGATGCCCTGGGTAATGGATGT
TTTCCACAAAGTTACGCAGGATAAATACAAATAG
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Coding sequence (CDS) from alignment at KK037251.1:401271..401504+

>rna9129 ID=rna9129|Name=rna9129|organism=Nannochloropsis gaditana|type=CDS|length=234bp|location=Sequence derived from alignment at KK037251.1:401271..401504+ (Nannochloropsis gaditana)
ATGCCGGCTTCATTTCCTAGTCCTGAGCATCCACCTAAGCAGCCGAGGTA
TCAAGCCTTGTTGAACAGCAAGTTTGGGCGAGCACTGGTACTTGCCGAGG
TAGCCACACTCGCGGGAACAGGGGTCCTATACTATACTCTCACGACAAGC
GAGGACGCAAGAAACAAACTTGCCTATCGGATGCCCTGGGTAATGGATGT
TTTCCACAAAGTTACGCAGGATAAATACAAATAG
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Synonyms
Publications