rna912, rna912 (mRNA) Nannochloropsis gaditana

Overview
Namerna912
Unique Namerna912
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length3233
Alignment locationCM002456.1:713635..713931 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100022g23.873.mrna
Orig protein idgnl|cribi|Naga_100022g23.873
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:713635..713931 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100022g23gene875Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29774.1cds912Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna912rna912-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna912 ID=rna912|Name=rna912|organism=Nannochloropsis gaditana|type=mRNA|length=3233bp
AGCTTTGAGTTTCCACGTGTATGACTTGTGCATCACACTCGATGCCGGAG
GGCGGGGGCCTGACACGTGCTCTTATCTCGCCCAGGAATTGTTCCTCTTA
TCGTGTTGATCTCCGCCGCGGCCTCGCTGCCTCTCGCCCCTTTCCGATGT
CGAGATCGCCGCCTCAGGCGCCACAGGCGATGTTCGCAGTCGGGTGACGA
GAAATGTGACTCACCAAGTCTTCGGCCAGACAGCCTACTCCCCAGGAAAT
ATGCTACATCGCATGGTGCGGCGGCGGCCCTGGGTGTGTGGCTTAACAGA
GCCGGCGACGTGCCTGCGATTGCAGCCTGAGGGGTCTTCCGGTACTGCCT
CAGCCAAGTTTCCCTCTTGCCGGGGCTGCCGCCATCCCAAATCCCATACA
TTTTCTACCGGCGCGGACACTGCCTTGAGTATCGTGCGGACGCAATCTGG
AAATCGCAAGCTTTCTGAGATTCTGAATGAAGCTGAGAAAGCATGGCAAG
ACTCACAGTATCCGTCGAAAATCACCTTCCAACTGCTGCATCTCCATGAC
GAGCTTGAAGACCAAGATACGGACGGGGCAATTCAAGCTACTGCGCCGAC
CTTGATCGCCACTGCTGAGCGCAATCAACTTCTCGATACGGATTTGATGA
CAACGGAAAGAGGCAACCCTGCGAGGGAAAAAGAAGAGCTCTCATGGAAG
CACCCGAGCACCGCAACATGCATCAGCGTCGCCCTTCCCCACGCCCAGGA
GGTTGTCCTCTTTCGATGCCACGACGCCTCATTCCCTCAACTCCGACGCA
AAGGAGTACAAGGTGCCGGAAGTGACGGTGCGGATGCATCAGCGTTGCAG
GATATGGTGCTGCAACGACAACCGCAGCTTTTGCTCCTCATCGCGGAGCC
TAACTTTCCCCTGGCCGAGTTGAGCAGTCGCCTTGAGTGCATTTTTGACA
AAAGCTATGTGCTGGCTGCATATGCGCGTGCCGTGCTTCCAGCCCTGCGC
CCTCCACGCATCCTGGCGCTCGGCGGAGCTGAGACTCCCGCTCCGGGCCC
CGAGGGAGGAGCGGAGGGAGGAGACGCCACGGTGCCGCGGGCCCTTGGAC
TGGCCGTGTTCGGCGACCAGACCCTTTCCGCGGATGACGCGGGCCGCTTG
GCCTGCTGCCTCTTGGGGTCTTCGTGGCTGGGCAACTTTTCCTTGGACCA
GGCCCTGACGCGGCAACTCTTCGTCCCCCGACACTGGACGCTGGGGCGGC
AGCCTCCCACCCACCGGTACCGGTCAGTAAGCGACACCCAGGCCCGGGAC
CTTCCTTTATTTCGACTGCAGTCTGTGCTCTTCCCGGGCTGCTCCCTCAT
CCTGAAAGTATTCGAGCCCCGGTACCGGCGCATGGTGAAGCAGTGCCTGG
AGCGGAATGAGCCCTTCGGCCTCGTCCACGCCCGGGACACGGTCGGGACC
CTGGCCTCCATCACGGTACGTGCCCCTGCCCCTGCACGCCTCGGCTCCCA
CCCTGCACCCGGCCCCCACGTGCTCACTCGTTCCCCTCGCTCGGTCGCAG
GAGGTCTACCGGATGGAGGAGGAGACTGGCGTCAGCATCCTCAGGGTCTC
CGGCACGCGCCGGTTTCAGGTGGAGGGCAGCCGCCTGGCCGAGGATAGCT
TCGGGCTCCTGACGGCGACGCGGGCCCGCTTCTTCGACGAGGACCCGGTG
GAGGACCTGGAGGAGCTCGAGGCACTCCGGCTGCAGGCGCGCACCTGCCT
GACGAGCTCGCTGGCCGCGGCCTCCGCCTCAGCCATGGGCCCGCCTCCCC
CCTTGTCTCTCTTGCAGGATGCGCCCTTGCGACCGTCGCCTGGGGAAGGG
AAGGACGGGAACGGGCAGAGCACAAGGGGCCAGCCGCGGTCCGGGGGGAG
GGAGCAGACGGGGGGCGTGGAGGAGCTCGCCAGGGCCTTGGCGAACGAGT
CCTTCCTCCTGAGCCAGTGGCTGGTGGACAGCTACCAGAGCTTGTTGCCG
GATGGCAAAAAGGTTGAATGGCTCCGGACTCGGTCGACCAGGGAGCGCAT
GAGGGGATGTTTGGACTTGCTGCTGAGGCTCGTCAGAGAGGGGAAAGGCA
GGGTGAGGGGATCGACCGAGCCAGGCAAGGAGGGCTCCGTGTGAACCAAA
GGAAGGAGAAGAGAGGGGCTTGCATGCCTTCATGGGTAGCTATTGGCAAC
AAGATCTTTGTCGTACTGGCCTCCTCCGTGACTCATTCTTTGGTGCTGGG
GCTGTGCTCTATTCGGCGCCCTCTCCCATAGGTTTCCAGGGAGGTGTGCA
CGCTGCACCGTAGTCTTTTCCTTCATACGAAGCATGCGCGTCCGTGACAT
ACTATATTCCGCAATAGAACCCAAACCCCTGCCCGTGATGCATCGAAGTC
GCTGAGCTCGCATCGGGCCATCCTCACCTTTCCTTGCTGGCCTCTGCCCA
CGTCCTCGTGGTGGCCGTGCATGCATTCAGGGGCAGCTTTCGGGCACCTC
CGCTGTATGCTCTGGAAATTGTCATCCTAGGAGAGATCGCGCAGGTTGAA
CTGTGGGGGATGACAAGGGAAAGCTGTCAAGAAAGTCTCTTTCAAAGTGG
AAGGTATCCTCATCTATTAGTATACTAGGCTCACAAAGCCAGTTCCAAAA
TGCAGCAACAAATGAACTAGATAAACAAGTGAGTACTCAACACATGCACT
CTTTATCTTACCCCCGACCGTTCCATTCACGTACGATGTCTCCAAAGTTA
TTGTAGAAGCCTTTGTGTACTTGCTTCTCGCCGCCCAGATAACCATCTCC
AGCCGCCAAGTCCATGCCGCTCGCTCCGTCCTCCTCGAGAAATCCTCGAC
TTTGCCATCTCTCTGCACTGGAGTCTTTGCCTGTACTCGACACTTTAAAC
CCCCGGACCCGCTGCCGACCACCTTCGCGGGGTGGAGCGTAGTCCGTTGT
GCTCCACATGGCGAGTGACAGTAAGGCTTCCTGCGGCGTCCCTCTAAGAA
ATATTGATATGTGCAACGTCACGAGTCTTAGGAGAAGATGCACAATGGTA
ACGCCCGAGTCGCCCCGTGAATCACGACACCTCTTTTGTGGGGAGGAATT
CGCGCAGACAACGTAGGGACCCCACTCGAATCATGGCGCCCTTGGAACCT
GCGAAATAATACATCGACGGTCTCCCTTCGTGCTAATGTGCCATAGGGAT
AGCCTCCTGAGTCCTTGATAGCGTAGCAACAAT
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protein sequence of rna912

>rna912-protein ID=rna912-protein|Name=rna912|organism=Nannochloropsis gaditana|type=polypeptide|length=98bp
MHARPPRGRGQRPARKGEDGPMRAQRLRCITGRGLGSIAEYSMSRTRMLR
MKEKTTVQRAHLPGNLWERAPNRAQPQHQRMSHGGGQYDKDLVANSYP
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mRNA from alignment at CM002456.1:713635..713931-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna912 ID=rna912|Name=rna912|organism=Nannochloropsis gaditana|type=mRNA|length=297bp|location=Sequence derived from alignment at CM002456.1:713635..713931- (Nannochloropsis gaditana)
ATGCATGCACGGCCACCACGAGGACGTGGGCAGAGGCCAGCAAGGAAAGG
TGAGGATGGCCCGATGCGAGCTCAGCGACTTCGATGCATCACGGGCAGGG
GTTTGGGTTCTATTGCGGAATATAGTATGTCACGGACGCGCATGCTTCGT
ATGAAGGAAAAGACTACGGTGCAGCGTGCACACCTCCCTGGAAACCTATG
GGAGAGGGCGCCGAATAGAGCACAGCCCCAGCACCAAAGAATGAGTCACG
GAGGAGGCCAGTACGACAAAGATCTTGTTGCCAATAGCTACCCATGA
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Coding sequence (CDS) from alignment at CM002456.1:713635..713931-

>rna912 ID=rna912|Name=rna912|organism=Nannochloropsis gaditana|type=CDS|length=297bp|location=Sequence derived from alignment at CM002456.1:713635..713931- (Nannochloropsis gaditana)
ATGCATGCACGGCCACCACGAGGACGTGGGCAGAGGCCAGCAAGGAAAGG
TGAGGATGGCCCGATGCGAGCTCAGCGACTTCGATGCATCACGGGCAGGG
GTTTGGGTTCTATTGCGGAATATAGTATGTCACGGACGCGCATGCTTCGT
ATGAAGGAAAAGACTACGGTGCAGCGTGCACACCTCCCTGGAAACCTATG
GGAGAGGGCGCCGAATAGAGCACAGCCCCAGCACCAAAGAATGAGTCACG
GAGGAGGCCAGTACGACAAAGATCTTGTTGCCAATAGCTACCCATGA
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Synonyms
Publications