rna9098, rna9098 (mRNA) Nannochloropsis gaditana

Overview
Namerna9098
Unique Namerna9098
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1782
Alignment locationKK037251.1:326587..327195 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g49.1950.mrna
Orig protein idgnl|cribi|Naga_100012g49.1950
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:326587..327195 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100012g49gene8822Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9098rna9098-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21618.1cds9068Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9098 ID=rna9098|Name=rna9098|organism=Nannochloropsis gaditana|type=mRNA|length=1782bp
ATGCCAGGCTCAGAGGATGATGCTTCGGGCCCCGGTGCAGCGGCGCTGCC
AGGCGAAGAAGAATCACAGCCGCCCGCAGTGAGGACGGAGGGCGAAGGGG
CTTCTGAGGCTCTCTCTTCGAATGGGACCGGCCACAAAGGAGGCGATGTA
CACGAGGAAGAAGGACGAGGAAAGGAAGAGATGGGAGGCCCCAACGGGAA
GGAAAGGCATGGGGACAGGGATGAGGATGAGGAGGAGGTCGCGAGCAAGG
AAAAGCGGCGGGAACGCAGGCGACATTCGTCCCGATCGCGAAGTCGATCT
CCTCGCGGAGGCAGCCGTGGGTCACGGAGAGACAAAAGACGGAGCCGGAG
TCGTTCTGAAAGTCCGAGGGGGGACCGGCGGCGGCGCAGCCGAGATAGGG
AGGGGAAATCATCGCGGCGCTCTAGGCGCTCAGCCAGTGGCAGCCGCAGT
CTGTCCCCCCCGTCCTCTCGCCGTCGCCGACGTCGAGAACGGGCCAACAA
CTGGGACAAGCCTCCTGAGGGGCTAACAGTGGGACAGGGGGCCGTGACTG
CGACGCTTCAAGGCTTGGGGGGGCTGGGACTGTCCGGGTCGGGGGCGGGG
CAGTTTATGGACCCGCCGATGCTGGATCCGGGCGTGATGATGGGGACGGC
GGCGTTGGGGGCGGGAGGCGTGGTGCGGGGTGCGATCGGGACGCTGACGG
CGCCCACGGCCCCGCCCAACCAGCAGGAGTTGTTTAACGGCGTGATGGTG
CCCACCATGATGCTTCGACAGGCCAAGCGCCTTTACGTGGGGAATGTGCC
GATGGGCTGCGACCAGTTCGTCTTGATGCAGCTCTTCAACCAGGCCATGG
TGGCAGCGGGCAAGGGGAGCGCCACCGCCCCCCCCATCGTGGGCGTGCAA
GTGAACGAGAGCAAGCCCTTCGCCTTCTTGGAGACCCGCACCCCCGAGGA
CGCCGCCAACGTCCTCCTCTTCGACGGGATCACCATCGGGGCCAACCAGC
TGAAGGTCCGGCGGCCCAAGGACTTCAAGCCGCTGCCCGGCATCGTTGAC
CCCCCTACGGGCGTCTCCCTCATCCCGGGGCACCTGCCCACCAGCGTGGA
GAACACGGAGAACAAGATCTATCTGGGCTCCATTCCCACCCACTTCAACG
ACCTCCAGGTGCGGGAGCTTGTCTCTGCCTTCGGGAACCTCAAGGCCTTC
AACCTGGTCAAGGATCCGGCCCTGGGGACCAGCAAGGGCTTCTGTTTCTT
CGAGTACCTGGATCACGCCCTTACGGACCGGGTATGCGCGGAGCTGAACG
GCTTCGAACTCGGGGAGCGGAAGCTCATCTGCCAGCGCGCGAACCCCAGC
CCCGCTCCCGCTGCTGCCCCCTCGATGGCGGCCTTGGCGGGCGGGAGCAT
GCACCCCTACGCAGCCCTCTTGACCGGGTCATCGGCGGCGGCGGCTCCGC
TGGGCCCGGCCACCAAGGTCCTGAAATTGAGCAACATGGTGGTGGCGGAG
GAGTTGCGGGACGACAACGAGTACGAGGAGATCGTGATGGATATCAAGGA
GGAGTGCGGAAAGTACGGGCAGGTGGTGTCCCTGAAGGTGCCGCGTCCCT
CCTACAAGGAGGACGGGAGCGTGGACGTGTCGCCCCCGGGGGTCGGGGAG
GTTTTTGTCGAGTTTGCGGATGAGGATGGGGCTACGAAGGCGGGGAATGC
CCTCAGGAATCGACAGTTCTCTGGGAGGACCGTGGTGTGTGAGTTCGTCA
AGGAGGAGGATTACGCGGGCGGGAACCTCTGA
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protein sequence of rna9098

>rna9098-protein ID=rna9098-protein|Name=rna9098|organism=Nannochloropsis gaditana|type=polypeptide|length=178bp
MTLVFRSTRYPTSPGEREGGRWTRGETPCFWSCPGRACVCRFDSVFFCRR
DRLGVLSLVSLLGRPRRSQSVRCPSHGTTYSVHIGDFLRSVSEARCFLFV
YSEPVGRRLPCRGSEEHSLIITPSSVLDGQGARTTRQEEIGLREREVTLI
VGEGSRRVCPWSGPGACFKFKEEFEGES
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mRNA from alignment at KK037251.1:326587..327195-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9098 ID=rna9098|Name=rna9098|organism=Nannochloropsis gaditana|type=mRNA|length=609bp|location=Sequence derived from alignment at KK037251.1:326587..327195- (Nannochloropsis gaditana)
ATGACCCTAGTCTTTCGGAGCACTCGGTACCCCACCAGCCCCGGAGAGAG
GGAAGGAGGGAGGTGGACCCGCGGGGAGACCCCGTGCTTCTGGTCGTGCC
CGGGCAGGGCGTGTGTGTGTAGGTTTGATTCTGTTTTTTTTTGTCGACGT
GACCGCCTCGGGGTCCTCTCACTCGTCTCCCTTTTGGGAAGGCCGCGTCG
CTCTCAGTCCGTTCGCTGTCCATCCCACGGCACCACCTATTCAGTTCATA
TTGGAGACTTCCTGCGCAGTGTCTCAGAAGCAAGATGCTTCCTTTTCGTT
TACAGCGAGCCTGTGGGCAGGCGACTCCCATGTCGGGGTTCGTGCTGGCA
TGGCCTCGAGGGAGGTGGAAATGGCGAGTTCCCTTGTGGAAGGGCACTGT
AAAACACTCTTAGGGAGGAGCATTCACTCATTATCACACCGTCATCCGTG
CTGGATGGACAGGGCGCGAGGACGACTCGACAGGAGGAGATAGGCTTGAG
AGAGAGAGAAGTGACCTTGATTGTCGGAGAGGGATCAAGACGTGTATGTC
CTTGGTCAGGACCCGGTGCCTGTTTTAAGTTCAAGGAAGAGTTTGAAGGC
GAATCTTGA
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Coding sequence (CDS) from alignment at KK037251.1:326587..327195-

>rna9098 ID=rna9098|Name=rna9098|organism=Nannochloropsis gaditana|type=CDS|length=1074bp|location=Sequence derived from alignment at KK037251.1:326587..327195- (Nannochloropsis gaditana)
GGAGGAGCATTCACTCATTATCACACCGTCATCCGTGCTGGATGGACAGG
GCGCGAGGACGACTCGACAGGAGGAGATAGGCTTGAGAGAGAGAGAAGTG
ACCTTGATTGTCGGAGAGGGATCAAGACGTGTATGTCCTTGGTCAGGACC
CGGTGCCTGTTTTAAGTTCAAGGAAGAGTTTGAAGGCGAATCTTGAATGA
CCCTAGTCTTTCGGAGCACTCGGTACCCCACCAGCCCCGGAGAGAGGGAA
GGAGGGAGGTGGACCCGCGGGGAGACCCCGTGCTTCTGGTCGTGCCCGGG
CAGGGCGTGTGTGTGTAGGTTTGATTCTGTTTTTTTTTGTCGACGTGACC
GCCTCGGGGTCCTCTCACTCGTCTCCCTTTTGGGAAGGCCGCGTCGCTCT
CAGTCCGTTCGCTGTCCATCCCACGGCACCACCTATTCAGTTCATATTGG
AGACTTCCTGCGCAGTGTCTCAGAAGCAAGATGCTTCCTTTTCGTTTACA
GCGAGCCTGTGGGCAGGCGACTCCCATGTCGGGGTTCGGAGGAGCATTCA
CTCATTATCACACCGTCATCCGTGCTGGATGGACAGGGCGCGAGGACGAC
TCGACAGGAGGAGATAGGCTTGAGAGAGAGAGAAGTGACCTTGATTGTCG
GAGAGGGATCAAGACGTGTATGTCCTTGGTCAGGACCCGGTGCCTGTTTT
AAGTTCAAGGAAGAGTTTGAAGGCGAATCTTGAATGACCCTAGTCTTTCG
GAGCACTCGGTACCCCACCAGCCCCGGAGAGAGGGAAGGAGGGAGGTGGA
CCCGCGGGGAGACCCCGTGCTTCTGGTCGTGCCCGGGCAGGGCGTGTGTG
TGTAGGTTTGATTCTGTTTTTTTTTGTCGACGTGACCGCCTCGGGGTCCT
CTCACTCGTCTCCCTTTTGGGAAGGCCGCGTCGCTCTCAGTCCGTTCGCT
GTCCATCCCACGGCACCACCTATTCAGTTCATATTGGAGACTTCCTGCGC
AGTGTCTCAGAAGCAAGATGCTTCCTTTTCGTTTACAGCGAGCCTGTGGG
CAGGCGACTCCCATGTCGGGGTTC
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Synonyms
Publications