rna909, rna909 (mRNA) Nannochloropsis gaditana

Overview
Namerna909
Unique Namerna909
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1200
Alignment locationCM002456.1:706698..707926 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100022g20.868.mrna
Orig protein idgnl|cribi|Naga_100022g20.868
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:706698..707926 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100022g20gene872Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna909rna909-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29769.1cds909Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna909 ID=rna909|Name=rna909|organism=Nannochloropsis gaditana|type=mRNA|length=1200bp
ATGGGAGGCGCGCACAAAACACCCTCGGCATTTGCCGAAGCCATGGGCGG
AGCCATTGGTGCACTGTGGACGACGCTACTTTTTTATCCCCTGGACGTGG
CCAAGTTACGCCTTCAGGCCGAAGCCGATTCTGAGGAGGAGGGGAGAAAG
GATGAGGAATATGATGTGGGTCGCGAGAAGGGATGCACGCCCAAGGTCAA
TACAGACATATGCGAAGACGCGAGCAGATTAGACGCTCCGGATGCGCTCA
CTACTGTTCAGAAGAAAGGGCCCAGGACCTTTCTGGGGGAAGTCTTAGTT
GTGTTGAAGCAACCAGAATTGTGGTACGCTGGATTAGGCTTGAAACTACA
ACTCTCCGTGCTCTCCACCTTCATCTACTTCTACGTGTACACCGCGCTCA
AACGGGTGTTCACGCGCGCATTCAAGCGGCCCGTGACATTCCTGCCAAAC
CTAGCGCTCGCGAGCATGGCCGGTGTCGTGAACGTCCTCCTGACAATGCC
CCTGGATACTCTCGTTACTCGTCTTCAGGTCGCACCGGCGGGTCGGCGTC
CCTCCCTTGGGGAGATGCTGCGTCTTGTGTGGGAAGAGGATGGTCCAGAC
CGAGAGCCTGTGGTAAAGCCAAGCGGTCACGAGGCAGGCGCGTACGGAGT
GGGGATGGGCGGCGTCATGCCCGTTCTCAGGCGTCTGGCGCGATTCTGGC
ACGGCTGCCTTCCCGCCCTCCTTCTCACCTCCAATCCTGCAATCAACTAC
GCAGCCTACGATGCTATGAAGACTCTGGTACCCCTTCCGCAAGGCCGCAG
ACATCACAACGTGAGGGAGACCTTTCTGATCGGCATGTTGTCCAAATTTC
TCGCCACGCTCATTACTTATCCGCTCATACGTGCAAAAGTCATAATGATG
AGCGACACGAAACGTGCGCACTACCTTGAAACCCATTTCGGGGTCAACGA
TCACAGCGAAGAGGATGCAGAGTCCATCCCTCTGGGTCTGTCGCCCAGGC
TCTTGCTGGCTCAGGAGCGACAGGGCCTCTGTAGCATTCTAAAGCAACTG
ATCAGAGAGGGCGGAGTCCGAGAGCTCTATGTCGGATTGGACGGACAAGT
TTTGAACACAGCCTTGAAAAATGCTACACTGCTCAACACGAAGGATCGCA
TCAGCCGTGTGACAAGCTTTCTGCTGCGCCGGTTCTTCGCATACCAGTAG
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protein sequence of rna909

>rna909-protein ID=rna909-protein|Name=rna909|organism=Nannochloropsis gaditana|type=polypeptide|length=185bp
METPLPGMGEMKTQEVGDIDVFDGDNGLHGSEEEEIAAMRANASPEANRF
MDSLGKIMKELSEPCQKEFGHILETQGKMVQLSEACQVEVSTASAAVPDI
VRHKEAAVQEAADRVRRANGRQPDPNTGKHLAVMLFILFVCIVGYIVWVN
RKLKEAGLTGKRPKHLSKKKMEKEMMRKQQAKKIM
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mRNA from alignment at CM002456.1:706698..707926+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna909 ID=rna909|Name=rna909|organism=Nannochloropsis gaditana|type=mRNA|length=1229bp|location=Sequence derived from alignment at CM002456.1:706698..707926+ (Nannochloropsis gaditana)
CCGCGACGCCTGCGAATTCATTTATCTGAAAGTCTTGACACAGTGACCAG
TCTCTTGTGGTTGAGCTTCGCAACCAAGACGTGCTTCCTTCACTCCTCGA
TCTGCAATATTGCAGCTTGACGGGGTCACAATTCAAATACTCGGCCCTTG
AAGCATTGGTCTCATGTCCTCCTTGAATTCCCAAGTGAGACTCGAAAACA
AGTCAAGAACATGCTAACAGATATCAATATACTATTCTGTCTGCAACGTC
GTAAGCGCTTGCATCTGTTGACCCCGAAACTGCCTCATCAACCCCAACTC
TCGTCCCTAACATGAACAAATTAGTGAAGCCCACAAGAACCTTTTTATCG
AATGGAGACGCCGCTGCCAGGAATGGGTGAGATGAAGACGCAAGAGGTAG
GAGATATTGATGTTTTCGACGGCGATAACGGCCTTCacggaagcgaggag
gaagaaatagCAGCGATGCGGGCCAACGCCTCACCGGAAGCAAACAGATT
TATGGACTCGTTGGGGAAAATCATGAAAGAGCTCTCTGAGCCCTGTCAAA
AGGAATTCGGTCACATCCTCGAAACCCAGGGAAAGATGGTGCAGCTATCT
GAAGCTTGTCAGGTGGAGGTTTCGACTGCTTCTGCCGCGGTCCCCGACAT
AGTGCGCCACAAGGAGGCTGCGGTCCAAGAGGCTGCCGACCGCGTGCGCC
GTGCCAACGGGCGCCAGCCTGACCCCAACACAGGGAAACATTTGGCAGTC
ATGCTTTTTATTCTCTTTGTCTGCATCGTGGGATATATTGTATGGGTTAA
TAGAAAGCTCAAGGAGGCCGGCCTGACTGGCAAACGCCCCAAGCACCtgt
cgaagaagaaaatggaaaaggaaatgatGCGTAAGCAGCAAGCAAAAAAG
ATCATGTGAAACTATTGATAACTGGAAGACGCAGATtctggaagaaaaag
ggatcATGCGAAAGCTCCCAGGAGATTTCTACTTGTGACATTATCGTGGC
CCACTGCAAGGCGCGCCCGAGAAAGCATAGAGAGAGAAGCTCTAGTGCGA
GCGGAGTACGGTGAacgcgaggaaaaagagacaCATTTAAGAATACGAGT
CGAGGATGCAGCGCCTGGTTTTGCTTGGCAAAGAGCTGTGCGCAACATGA
AAATTCACTTAAGTCATGTGCTTGCCTAGTGCGTCGACTGCACAAAGAAA
CGAAGCCATGTCAAGCAGTTAATTCGTCG
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Coding sequence (CDS) from alignment at CM002456.1:706698..707926+

>rna909 ID=rna909|Name=rna909|organism=Nannochloropsis gaditana|type=CDS|length=558bp|location=Sequence derived from alignment at CM002456.1:706698..707926+ (Nannochloropsis gaditana)
ATGGAGACGCCGCTGCCAGGAATGGGTGAGATGAAGACGCAAGAGGTAGG
AGATATTGATGTTTTCGACGGCGATAACGGCCTTCacggaagcgaggagg
aagaaatagCAGCGATGCGGGCCAACGCCTCACCGGAAGCAAACAGATTT
ATGGACTCGTTGGGGAAAATCATGAAAGAGCTCTCTGAGCCCTGTCAAAA
GGAATTCGGTCACATCCTCGAAACCCAGGGAAAGATGGTGCAGCTATCTG
AAGCTTGTCAGGTGGAGGTTTCGACTGCTTCTGCCGCGGTCCCCGACATA
GTGCGCCACAAGGAGGCTGCGGTCCAAGAGGCTGCCGACCGCGTGCGCCG
TGCCAACGGGCGCCAGCCTGACCCCAACACAGGGAAACATTTGGCAGTCA
TGCTTTTTATTCTCTTTGTCTGCATCGTGGGATATATTGTATGGGTTAAT
AGAAAGCTCAAGGAGGCCGGCCTGACTGGCAAACGCCCCAAGCACCtgtc
gaagaagaaaatggaaaaggaaatgatGCGTAAGCAGCAAGCAAAAAAGA
TCATGTGA
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Synonyms
Publications