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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100012g37.1916.mrna |
| Orig protein id | gnl|cribi|Naga_100012g37.1916 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:296514..301106 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9085 ID=rna9085|Name=rna9085|organism=Nannochloropsis gaditana|type=mRNA|length=444bp
ATGGCAGGGCGTTTGCTGCCGCTTGAGCTTGTGGACAAATGCATCGGGTC
TCGCCTGTGGGTCATCATGAAGGGCGACCAAGAGCTGGTGGGAACCCTGA
AGAGCTTCGACGACTACGTGAACATGGTTTTGGAAGATGTTACCGAGTAC
GAAGTGACTCCGGAGGGAAAAGTCGCGCATAAACTAGATCAGATCTTGTT
GAACGGTAACAACATCGCTATACTGGTCCCAGGGCGGTCACCAGAAGATG
GGCGACTAGTAAGATTTGTTGGGCGCCGGGAGCATGATGTGCATCTTATG
AAATGCCAATTTCTGTGGGAGTGCGTCGAAGCTACCGCGACCCGCTTTCC
GACGCTTGATATGGTTTTGCCAGGGCTGAATTGGGGTGGTAGTCCACGGA
TTTGTAGCATACTAAGGAAAAACAGACAACGCCATACTGCTTAA back to topprotein sequence of rna9085 >rna9085-protein ID=rna9085-protein|Name=rna9085|organism=Nannochloropsis gaditana|type=polypeptide|length=709bp
MERLVRERVRARWLGEVKARQHERDLLAALEAEEMGAEGESGKRRGKKNK
KKEKERKKKQEEAAKKREAALEKEREAAARQKALQEKVEADRRARLEQQR
REAEEEKKKLEAALEVRRLEEEAKRRRALEEERERQQRGSDERQRLRHQP
PQSLPKQAPQPQRQQGCKPVPHQQLRHPSSQPPRPLSSTSLAAGKQSPQQ
HPSGFGGAVSRSKKPLPGPHPHAQAAGARQGVSPAPAHRGPPRSPPHHLH
APRRASLPPTSRVPPGNAHLPQPPNKTRPAPAAPLSSGAWRHPFLPSCKQ
PRCRLRPHWPPVSPPALSERRRLALLPLQTPCGWREQAPLSSWHFSHAGG
LSPGGWTLSAPPPPPSGDRLPRLPQHLKPPPGQPPLRSSPPGPSTRGRQA
TGFGASRGWGDARLSRHGHVDAALLQPVRLSAPGTCSQILQPMRGGRRPL
GRDRSGRRRHRLIRCLLPFLPSPCPFPVGHAALASSDGRAWRPSPALEGR
GSRQVLQPSSLRPQHSTTVRVCAPSARPPPFLHASGPSCLRTHVSPARTG
TRPPRPAGRKGAARWAGGRRGGLGWEGRGDREGRWRRRRRRGSERVVRGE
IRFLGHIVARARRGQGGSLCGRITGVAVLSQCYGQNQGASQIARARETGS
RGQKRRNFEWTAFLPAASDWVTVLMAKLGTRPVGFFDFPPFHLTGSVFPP
SSKSGSRAA back to topmRNA from alignment at KK037251.1:296514..301106+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9085 ID=rna9085|Name=rna9085|organism=Nannochloropsis gaditana|type=mRNA|length=4593bp|location=Sequence derived from alignment at KK037251.1:296514..301106+ (Nannochloropsis gaditana)
GAAAGCATGATAATGACCACTCGTTCCCTTCGCACAGCGCTTCACTCATA
CATTTCGTTGTCTTACTGTTGCAACATACGTGGACACGAATACCTTGATT
GTGTCCGATTAATACAAAGGAGCAATTCGTACTGGCTTTGGTcgccttcg
cccccctccgtccttgcttcaaggagaggagcctACTGAAACCCGTTGCC
CCCGGATTTTCATATCGCGTGCAAGATTTTCAATCCTCATGCGTTTTTTC
TCAGGGTGAGGGGTTAAAAGTGTGAATACAATTCGCGTGATAAACGTTGC
AGCATACGTTGAGTGGCGCGACGTTTGCTTCAGGCGGCATTATCATCCTC
ATCTGAGTAGTGAACACCCAGCACCACAATCTCTCTTCCACAcgtttctc
ctctctctgtACAGCGGCATTGCTGCACGGGCAGCACGCCCTTCGACGCA
GTCTGCCAGTAAAAAGGAATCTTCTGCGTGTGATTTGACAGATCGAGATC
AAAAGATAGGACCCCCGCGGCCAGACGCAGCAAGCAAAGTGCGGCTTGTC
AGATTGAAGCGCGTGGGGCCAGCAAGGGTGGTGTGAAAAGGCAAACACGA
CTTTCCCTCATAAAATGACTGAAGATGCGGACTCTCAAGAGACAACATTT
GGCTTGCATGAATTCTGGAGCTCGTTGGACGAGCAACAAAAGCAGACTCT
CTTGGCTTTGCGCAAGGTAAGGGGATACGTGGCGTACCACAAGCGGAAGT
TAAAATTGCGGGAGCCATAACGTGGCGATTTGTGTTCAAGCACCTGTTGC
TCTCGTTTTTGTTCGAGTCAAGCACGCTTATTATAGTAACATGTCTTggg
ttttcctcctttcctccccttgttttcctttttccgcGTGCGCTCTCCCG
TCtcaccatctcctcgtcgATCACGCGCCCCGCCGTAATTAGGACACGAT
ATGTAGCGCCATCGAGTGTGCCACTTGCCGGGACCTTTTGGCCGCCTCTT
TGAAAGATATTGAGAAAGCGCAGCAGTATGCGACTGCTTATGCACAGAAG
CACGAAGAGGCCGAGGGCCTGGACGATTATGACTTGGGCGGGAGCCTAGG
AAGCAGCACGGGAAGCGCCAGCACAACGGGCACGAGCgcgggaaagcggg
gggggggtgcaaGCAAGAAAGGGAATGGCATCGGCGGACCTCTCCACCCG
CCATCCTCCCAGAAGGGGGCCCTCAGCCCCGCCCTTTTTCGGTCCGCTGG
AGGTGTCTTCCTCCCGGGCAAGTGGAGCCAGGCAACGCTCTCTCAGTGGG
CGATGGGTCTGCACGCGCCCTCATTTCCAGGCCCGGCCCATctaccttcc
ttctccagcgcttcctcccggccggcGATCGAggcgccgcgtcctccctc
cccctcagcgtccgcttcccccccgcccgaggaCAGTCCCGTGGgcttca
cctccttccagaACGGAAGCTTTGATCTTCTCCCCagccaggccctggag
gctttgctcctggacgaggaaaggggggaagagggtgggggggagaaaga
gaaagcgggcTCGGAAAGCCCCTCGGGACGCGCCCGCCGTCGCCCGCGGA
GTGcgggggatggggtggggagggagggggagaaggaggaccttccctgc
cccttctgCGCGGACAAGGTCTTTGTCCGCTTCGTGGACATGCTCACCTA
CCCCCGCCCGGTACGCAAATTCAGCATGCTTCTGCccaagaggatgagga
ttgGGGCTCTGCGGGAGATGTTGTGGCGCGAAGTgggcctggagaaggag
gcgctcCTTGAGGTCCGAATACGGAATCGGCGATTGacggcggggcaggg
ggatgcggggggaggggaggaagacacgcTGGAGGCTGTGGGGGTCCGAG
ACGGggtgcaggtggtggtgagtaaggtgctgggggggggacggggagga
gggggacaaggcgggcgTGAACGCCAAGAACAAGCAGTTTGTGGGGGATC
TGCTGTTTGGGCAAACcggcaaaggggaggggaacgagggggcggaggaa
gagcgaggggaaggagggggggggggcggaggtaCGTCGACGGGCGCAGG
CGGCAGTGCCAGTGCCAGTCGCGCCCGGAGCAcggtgaaagggaagggag
gcagggggccggggaagaaggcgacggcgaaagagaaagcggcggccgcg
gaacgggagaaggagcaagccttgcgggagaagcgggagcgggaggaaga
gggacagCCCTTGAGTGTGATCGAGGCCTTTCGGATCAGTGGGGGCTACC
AGGTCTTGGGGCAGACGATGGAGCGGCTGGTCCGGGAGAGGGTGCGGGCA
AGGTGGCTGGGGGAGGTCAAGGCCCGCCAGCACGAGAGGGACCTGCTCGC
CgccctggaggcggaggagatgggcgcggagggggagtcTGGGAAGCGAC
GGGGcaagaagaacaagaagaaggagaaggagaggaagaagaagcaggag
gaggcggcgaagaagcgggaagcggccttggagaaggagagggaagccgC
AGCTAGGCAGAAGGCGCTGCAAGAGAAGGTGGAAGCAGACCGACGCGCAC
GTTTAGAACAGCaacggcgggaggcggaggaggagaagaagaaactGGAA
GCGGCCCTGGAAGTGCggcgcctggaggaggaggccaagcgTCGGCgagc
gctggaggaggagagggagcgccAGCAACGCGGGTCCGACGAGCGGCAGC
GACTTCGCCATCAGCCACCACAGTCATTACCCAAGCAGGCGCCACAGCCG
CAACGGCAACAGGGATGCAAACCGGTGCCCCACCAGCAGCTCCGCCATCC
TTCAAGTCAGCCACCAcggcccctgtcctccacatCCTTGGCCGCGGGGA
AACAGTCGCCGCAGCAGCATCCCTCTGGCTTCGGGGGGGCAGTCAGTCGC
AGCAAGAAGCCTCTCCCGGGACCCCACCCGCACGCCCAAGCTGCAGGCGC
CAGGCAGGGAGTttccccggcccccgcccacaGGGGAccgccccgctccc
ccccccaccacctccatgcGCCACGCCGGGCCTCACTCCCACCGACCAGC
CGGGTCCCACCAGGGAATGCCCACCTACCCCAACCACCAAACAAAACACG
CCCAGCCCCCGCAGCTCCCCTATCGTCAGGCGCCTGGaggcatcccttcc
tcccgtcctgcaAACAGCCCCGCTGCCGCCTACGCCCACACTggcccccc
gtctccccaCCTGCCTTATCAGAGCGCCGtcgtctcgccctcctccccct
ccaaacCCCTTGCGGGTGGCGCGAGCaagcccccctctcctcctggcaTT
TCTCTCACGCCGGGGGTCTCAGCCCCGGCGGGTGGACCCTCTccgctccg
ccccccccaccatcgggcgaccgcctccctcggctCCCCCAGCACCTTAA
GCCCCCGCCAGgccagcctccccttcgATCTTCCCCACCCGGCCCCTCCA
CTCGCGGGCGCCAAGCTACGGGCTTTGGGGCCAGCCGAGGGTGGGGGGAT
GCCCGCCTCTCCCGACACGGTCACGTTGACGCCGCGCTTTTGCAGCCAGT
GCGGCTCTCAGCTCCAGGGACATGCTCCCAAATTCTGCAGCCAATGCGGG
GCGGGCGTAGGCCGCTCGGTCGGGACCGCTCAGGAcggcgccgccaccgc
cttatccgctgtctcctccccttcctcccctctccctgcccctttccaGT
GGGACACGCTGCCCTCGCATCCAGTGAcgggcgggcgtggcgcccttccc
ccgccctcgaggggaggggaagcaggcaagtcctccagccttcctcgctc
cgccCCCAGCACTCCACGACAGTACGCGTCtgcgctccctccgcccgacc
accccccttcctacaTGCATCTGGTCCGTCCTGCCTCAGGACCCATGTCT
CCCCAGCAAGAACAGGcacgcgccccccccgccctgcagGACGGAAGGGG
GCAGCgcggtgggcgggagggaggcgtggaggactcggatgggaggggag
aggagacagggagggtaggtggcggagaaggagaagaagggggagcgAGA
GGGTTGTACGAGGAGAAATCAGGTTCCTTGGGCACATTGTCGCCCGTGCG
AgaaggggccaggggggaagTCTCTGCGGCAGGATCACCGGCGTCGCTGT
CCTCTCCCAGTGCTACGGGCAAAATCAGGGGGCAAGCCAAATTGCCAGGG
CCCGCGAGACCGGTAGTAGAGGACAGAAACGGCGAAATTTCGAGTGGACT
GCCTTTCTTCCAGCGGCTTCGGATTGGGTAACGGTGCTAATGGCAAAGCT
TGGCACACGACCTGTGGGGTTCTTTGATTTTCCGCCCTTTCATCTCACGG
GCTCCGTCTTCCCACCAAGCTCAAAGTCAGGCTCGCGCGCGGCCTGATGG
GGGAGCGATTGATCCATGATTTGCTTATGTGCATGAAAAATGGCTGCTTT
CGAGCGACACAGGAAAGTAAAATCCTTTCCTTGGTACAGAAAGAGAAATA
GATAGATAACAAAAGCAAATTGCCCGCGTGGTGTCGTATGCCG back to topCoding sequence (CDS) from alignment at KK037251.1:296514..301106+ >rna9085 ID=rna9085|Name=rna9085|organism=Nannochloropsis gaditana|type=CDS|length=2130bp|location=Sequence derived from alignment at KK037251.1:296514..301106+ (Nannochloropsis gaditana)
ATGGAGCGGCTGGTCCGGGAGAGGGTGCGGGCAAGGTGGCTGGGGGAGGT
CAAGGCCCGCCAGCACGAGAGGGACCTGCTCGCCgccctggaggcggagg
agatgggcgcggagggggagtcTGGGAAGCGACGGGGcaagaagaacaag
aagaaggagaaggagaggaagaagaagcaggaggaggcggcgaagaagcg
ggaagcggccttggagaaggagagggaagccgCAGCTAGGCAGAAGGCGC
TGCAAGAGAAGGTGGAAGCAGACCGACGCGCACGTTTAGAACAGCaacgg
cgggaggcggaggaggagaagaagaaactGGAAGCGGCCCTGGAAGTGCg
gcgcctggaggaggaggccaagcgTCGGCgagcgctggaggaggagaggg
agcgccAGCAACGCGGGTCCGACGAGCGGCAGCGACTTCGCCATCAGCCA
CCACAGTCATTACCCAAGCAGGCGCCACAGCCGCAACGGCAACAGGGATG
CAAACCGGTGCCCCACCAGCAGCTCCGCCATCCTTCAAGTCAGCCACCAc
ggcccctgtcctccacatCCTTGGCCGCGGGGAAACAGTCGCCGCAGCAG
CATCCCTCTGGCTTCGGGGGGGCAGTCAGTCGCAGCAAGAAGCCTCTCCC
GGGACCCCACCCGCACGCCCAAGCTGCAGGCGCCAGGCAGGGAGTttccc
cggcccccgcccacaGGGGAccgccccgctcccccccccaccacctccat
gcGCCACGCCGGGCCTCACTCCCACCGACCAGCCGGGTCCCACCAGGGAA
TGCCCACCTACCCCAACCACCAAACAAAACACGCCCAGCCCCCGCAGCTC
CCCTATCGTCAGGCGCCTGGaggcatcccttcctcccgtcctgcaAACAG
CCCCGCTGCCGCCTACGCCCACACTggccccccgtctccccaCCTGCCTT
ATCAGAGCGCCGtcgtctcgccctcctccccctccaaacCCCTTGCGGGT
GGCGCGAGCaagcccccctctcctcctggcaTTTCTCTCACGCCGGGGGT
CTCAGCCCCGGCGGGTGGACCCTCTccgctccgccccccccaccatcggg
cgaccgcctccctcggctCCCCCAGCACCTTAAGCCCCCGCCAGgccagc
ctccccttcgATCTTCCCCACCCGGCCCCTCCACTCGCGGGCGCCAAGCT
ACGGGCTTTGGGGCCAGCCGAGGGTGGGGGGATGCCCGCCTCTCCCGACA
CGGTCACGTTGACGCCGCGCTTTTGCAGCCAGTGCGGCTCTCAGCTCCAG
GGACATGCTCCCAAATTCTGCAGCCAATGCGGGGCGGGCGTAGGCCGCTC
GGTCGGGACCGCTCAGGAcggcgccgccaccgccttatccgctgtctcct
ccccttcctcccctctccctgcccctttccaGTGGGACACGCTGCCCTCG
CATCCAGTGAcgggcgggcgtggcgcccttcccccgccctcgaggggagg
ggaagcaggcaagtcctccagccttcctcgctccgccCCCAGCACTCCAC
GACAGTACGCGTCtgcgctccctccgcccgaccaccccccttcctacaTG
CATCTGGTCCGTCCTGCCTCAGGACCCATGTCTCCCCAGCAAGAACAGGc
acgcgccccccccgccctgcagGACGGAAGGGGGCAGCgcggtgggcggg
agggaggcgtggaggactcggatgggaggggagaggagacagggagggta
ggtggcggagaaggagaagaagggggagcgAGAGGGTTGTACGAGGAGAA
ATCAGGTTCCTTGGGCACATTGTCGCCCGTGCGAgaaggggccagggggg
aagTCTCTGCGGCAGGATCACCGGCGTCGCTGTCCTCTCCCAGTGCTACG
GGCAAAATCAGGGGGCAAGCCAAATTGCCAGGGCCCGCGAGACCGGTAGT
AGAGGACAGAAACGGCGAAATTTCGAGTGGACTGCCTTTCTTCCAGCGGC
TTCGGATTGGGTAACGGTGCTAATGGCAAAGCTTGGCACACGACCTGTGG
GGTTCTTTGATTTTCCGCCCTTTCATCTCACGGGCTCCGTCTTCCCACCA
AGCTCAAAGTCAGGCTCGCGCGCGGCCTGA back to top
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