rna9080, rna9080 (mRNA) Nannochloropsis gaditana

Overview
Namerna9080
Unique Namerna9080
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1382
Alignment locationKK037251.1:286922..288794 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g32.1938.mrna
Orig protein idgnl|cribi|Naga_100012g32.1938
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:286922..288794 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100012g32gene8806Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21606.1cds9050Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9080rna9080-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9080 ID=rna9080|Name=rna9080|organism=Nannochloropsis gaditana|type=mRNA|length=1382bp
GATTCCAAGGTCCCGTCTGCCATGTTGGAAGCCTCAATCCACCTTTTTTT
AATATATGTACCCATTTTATCATTCTTTCAGAGCATAGGAGGCGGAAGGA
GGCGGCAAAACTTCACACATGACGACTTCGTCGTTGTTCTTGCACCCCTC
TCGCGTCGGTACTGCCCATGTGGCCAGCCTTCTCATATGCATCGGCGCCA
TCGTAAACATGCCCGGCGTCTTTGCTACAGCTGTAATTGGGAGTATGACA
CCTTCTTCCTCTGATCGATGGCCCCCCCAGCTTTTTGTGGCAGACCTATT
GCTGTCCTCTGCTTTTTTGACAGCGGGATTTTTTTGGGTAAAGACGCCGG
ACATGACCCCGAAGCGCCTGGCCTGGTTACTGAGTGCCTTTAGTAGCTTC
ATCACCGCATCATTGAGCATGTCTGCTTTGTATCAGTTGTTCGCTCAGTC
GTGGGTAATAGAAAACGTCCTATTTGCCGACGATCGTCTGAGTCGCTTCA
CGGCCACGTTCTTCATTGCCTTCCTAATCTTGGACTTGGCCTTAGGCATG
CGGTACTACCCATCCCAAATCCACCTGTTGAGCGGGTGGGTGCACCATTG
CTTCTATCTGGGGGTCTTGGCCTGGGCCCTCCATTCCCACTTCTCCCTCG
GCTTCTGCCTCTTTTTGCCCCTGGAGATCCCCACCTTCATCCTGGCCGTC
GGCTCCATATACCCCCAGCGCCGAAGCGATTGGCTCTTTGGCATGACGTT
TTTAATCACCAGGATTTGCTACCACCTCTGGTTGTTCGTCCTTGTGAGGG
AGATCAAGGACCCGCGGCTGCCCGTGTGGGTGGTGATTGCGGTCACCTTC
TGTCTGCACATATATTGGTTCGGATTATGGTGGAAAAGTTACAGGAGAAA
ATATTTGTTGGGGAAGGGAGGGAAGAAAGAGGGTGCCATGGATGGGAAGG
GCGTGGCAGCAGCGGCGGGGGAGCAGGGTAACGAGGATGGGGGGAGGAAG
AGCAAGAAGGAGTGAGAAAAGCATGGCTGGTGTAGACGCAGAACAAGGGA
ACCGGGGAGGAAGGCGGCACTGTGATTGCGTCGGATTCACAGGTGACAAG
GGACCGCTTTCCTCTTCAGTGTCCACGCGTGGGCGACGGGCAGGGTCCGG
GTTTTGAGGTGGATGAGGTGCATGTATCAAATCAGCATTTTTGAGCCAGG
AAATGCGTGACTGCCGTAATCATGTGTGTGCAGACGCCAAAGAAAACGAG
CAGGGAGGATGCTGGACTCGACGTCGCTCTCACCTGTGTCCACCAAGAGG
GGCTTGAGAAGGTGGGGGGAGAAGCTCCTGTACACAGACATCGCACAAGG
GATTAATGATTGAAAGAAATACAGAATCATTA
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protein sequence of rna9080

>rna9080-protein ID=rna9080-protein|Name=rna9080|organism=Nannochloropsis gaditana|type=polypeptide|length=371bp
MPYWDCRLARCLLLWIVLLSLVDKSYGRDEESIRALASTRTRRPTPVRAT
RAPRPTRAPRTKPPTFNDPLPTKIPTLAPTHAKLTARPTAYVPPPKPGEE
SVPGEVEALLPEAINSKPFIYAGIGVGLFLIVLASVFLVVRSLRRSAASA
ILNAGSGGPSSGFGTPPPYGNSFSSPVLTPSLYACSPSPYQDPKSHFSSS
TLSSNAASRVADASAGLRASRQGPQAPENQQQQPKQASSSQIRPAPFTRP
APSPPPPSSINQHVSSLPPLPPSPTQPPAKPRPVARPSNLPPPPIHSPPP
VARAPSSQPPPHRPPRRGHDPPPDRRGRQPEAPPRGRELEQRQAPPPRGR
RAFVEGVRIREGEGDDGDSGF
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mRNA from alignment at KK037251.1:286922..288794-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9080 ID=rna9080|Name=rna9080|organism=Nannochloropsis gaditana|type=mRNA|length=1873bp|location=Sequence derived from alignment at KK037251.1:286922..288794- (Nannochloropsis gaditana)
AGCGCACTCCTTCCGTTGATTTGGGAAGCTCACCTAACCCTCCCACCCCG
CATCGTCCATAAGAGCCCACGGAAGTGAGAGCTTCACTATACACTCAAAT
TGTCATTGTTTTTTCCTACCTTCTGTTCGATGCAACAGTAGGAAATTAGT
ATTCGTAACTCCTATGACATCAATTTTCTTCTGTCCAGCCTAGTTTCTAT
GCCTTATTGGGATTGCCGGTTGGCCCGCTGCCTACTCCTGTGGATAGTCT
TGCTATCTTTGGTGGACAAAAGCTACGGAAGAGACGAGGAGTCCATACGG
GCGCTTGCCTCGACGAGGACTCGTAGGCCGACGCCCGTACGAGCTACGAG
AGCTCCACGCCCTACAAGAGCTCCGCGAACGAAGCCTCCGACATTCAATG
ATCCGCTACCGACCAAGATCCCCACACTCGCTCCTACGCATGCAAAATTG
ACCGCCAGGCCAACCGCATACGTACCGCCCCCCAAACCCGGCGAAGAATC
GGTACCTGGAGAGGTAGAGGCCTTATTGCCTGAAGCTATCAACTCGAAGC
CTTTCATTTACGCTGGAATAGGGGTGGGTCTTTTTCTCATAGTTCTCGCA
AGCGTTTTCTTAGTAGTCCGCTCACTTCGCCGTTCTGCTGCCTCAGCAAT
CCTAAATGCTGGGTCTGGAGGTCCTTCTTCTGGGTTTGGCACTCCCCCTC
CCTATGGAAACAGCTTTTCCTCGCCTGTCCTCACTCCTTCCCTCTATGCG
TGCTCCCCAAGCCCTTATCAAGACCCAAAATCTCACTTTTCCTCCTCCAC
TTTGTCATCGAATGCTGCTTCTCGGGTGGCAGATGCAAGTGCGGGCCTGC
GAGCCTCTAGGCAGGGGCCACAAGCTCCGGAGAACCAACAGCAGCAACCA
AAACAGGCCTCCTCCTCACAGATCCGTCCAGCCCCCTTCACCCGACCGGC
ACCCTCGCCCCCCCCTCCATCCTCCATCAATCAACACGTTTCTTCCCTTC
CTCCTCTCCCTCCCTCTCCGACCCAGCCTCCCGCCAAGCCCAGGCCGGTT
GCTCGTCCCTCTAACTTGCCTCCTCCTCCAATACACTCGCCTCCGCCTGT
CGCCCGCGCTCCCTCTTCTCAACCACCCCCCCATCGTCCTCCAAGGCGTG
GGCATGACCCTCCTCCCGATCGCCGCGGTCGGCAACCGGAGGCGCCACCA
CGTGGCAGAGAATTGGAACAGCGCCAAGCACCCCCTCCACGGGGCCGACG
GGCGTTCGTTGAAGGCGTGCGGATCCGGGAAGGAGAGGGCGACGACGGAG
ACAGTGGATTCTGAAGGGAGCAAGAAGGGCTTCTGGGGAGATATGAGGGA
GAGATGGTGCCAGAGGGGGATGTAGTTACATATGTGAAAAAGGGAAGGTC
GGGCACAGGTGATGGGCAAGGGTTTCCGATAAGGCTGGAGGACAGATGAA
AACTGAGGAGGGAGGACAGGAGGGGGGTGCGAGGGCCCGGTGGTTTGGGA
AAGGGGTCAAGAGGAGTGGGAAACAGGGTGTGTGCATGGATGCTTTGTAA
AGTTGCGCGGTTAAATAGGACGCGGTGTCCAGGTCAAGGGAGGCCGAGCA
AAGCGGGCCGCCCACGAGGTCGAGGGAATTTCTCCTTCCACTTCCATATT
CAATGGGCGCCAGCCCCCTTGAGGTTCTGTTAATGATTCTGTATTTCTTT
CAATCATTAATCCCTTGTGCGATGTCTGTGTACAGGAGCTTCTCCCCCCA
CCTTCTCAAGCCCCTCTTGGTGGACACAGGTGAGAGCGACGTCGAGTCCA
GCATCCTCCCTGCTCGTTTTCTTTGGCGTCTGCACACACATGATTACGGC
AGTCACGCATTTCCTGGCTCAAA
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Coding sequence (CDS) from alignment at KK037251.1:286922..288794-

>rna9080 ID=rna9080|Name=rna9080|organism=Nannochloropsis gaditana|type=CDS|length=1116bp|location=Sequence derived from alignment at KK037251.1:286922..288794- (Nannochloropsis gaditana)
ATGCCTTATTGGGATTGCCGGTTGGCCCGCTGCCTACTCCTGTGGATAGT
CTTGCTATCTTTGGTGGACAAAAGCTACGGAAGAGACGAGGAGTCCATAC
GGGCGCTTGCCTCGACGAGGACTCGTAGGCCGACGCCCGTACGAGCTACG
AGAGCTCCACGCCCTACAAGAGCTCCGCGAACGAAGCCTCCGACATTCAA
TGATCCGCTACCGACCAAGATCCCCACACTCGCTCCTACGCATGCAAAAT
TGACCGCCAGGCCAACCGCATACGTACCGCCCCCCAAACCCGGCGAAGAA
TCGGTACCTGGAGAGGTAGAGGCCTTATTGCCTGAAGCTATCAACTCGAA
GCCTTTCATTTACGCTGGAATAGGGGTGGGTCTTTTTCTCATAGTTCTCG
CAAGCGTTTTCTTAGTAGTCCGCTCACTTCGCCGTTCTGCTGCCTCAGCA
ATCCTAAATGCTGGGTCTGGAGGTCCTTCTTCTGGGTTTGGCACTCCCCC
TCCCTATGGAAACAGCTTTTCCTCGCCTGTCCTCACTCCTTCCCTCTATG
CGTGCTCCCCAAGCCCTTATCAAGACCCAAAATCTCACTTTTCCTCCTCC
ACTTTGTCATCGAATGCTGCTTCTCGGGTGGCAGATGCAAGTGCGGGCCT
GCGAGCCTCTAGGCAGGGGCCACAAGCTCCGGAGAACCAACAGCAGCAAC
CAAAACAGGCCTCCTCCTCACAGATCCGTCCAGCCCCCTTCACCCGACCG
GCACCCTCGCCCCCCCCTCCATCCTCCATCAATCAACACGTTTCTTCCCT
TCCTCCTCTCCCTCCCTCTCCGACCCAGCCTCCCGCCAAGCCCAGGCCGG
TTGCTCGTCCCTCTAACTTGCCTCCTCCTCCAATACACTCGCCTCCGCCT
GTCGCCCGCGCTCCCTCTTCTCAACCACCCCCCCATCGTCCTCCAAGGCG
TGGGCATGACCCTCCTCCCGATCGCCGCGGTCGGCAACCGGAGGCGCCAC
CACGTGGCAGAGAATTGGAACAGCGCCAAGCACCCCCTCCACGGGGCCGA
CGGGCGTTCGTTGAAGGCGTGCGGATCCGGGAAGGAGAGGGCGACGACGG
AGACAGTGGATTCTGA
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Synonyms
Publications