rna9077, rna9077 (mRNA) Nannochloropsis gaditana

Overview
Namerna9077
Unique Namerna9077
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1092
Alignment locationKK037251.1:281214..283630 +

Link to JBrowse

Properties
Property NameValue
Productmolybdenum cofactor sulfurase
Orig transcript idgnl|cribi|Naga_100012g29.1940.mrna
Orig protein idgnl|cribi|Naga_100012g29.1940
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:281214..283630 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100012g29gene8803Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9077rna9077-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21608.1cds9047Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9077 ID=rna9077|Name=rna9077|organism=Nannochloropsis gaditana|type=mRNA|length=1092bp
ATGACAGCAGCGACGCTGACCGCAACTACCACTTCGAGCACCGAGACGAG
GCTCAACAATGCCGGAGGAAAGGAGATCAAGTCGGCGGCTGGCTTCGACC
TCTTCCCTCGGCCCCCTCGCACAGCCTATGATTTATACCAAGATGAAAAA
CACACGCGCCGAGTTTCCCTCGGTTGCCCTGTCCTGGATGCCGCCTTTCG
TGGAGGCCTTCCCGGCCATGGGGTTGTGGAAGTCAGCGGTATGGCAGGCG
CGGGCAAGACCCAATTGATGCTCCAGCTCCTTGTTCAGCAGGTGAGGGAC
GCCGAGGCGGAGTGGCGACGTGCCAAGTACGCCACGCCTTTTGTGGCAGG
CCGGTCTTTTTATCTGTCGACCGAAGGACCGTTGCCGGCGAAACGGTTGG
CGGAGATGGCGGCCGCGACTTGTCCGGAGGACAGTGGCTTCGCCCAACGG
GTGTTGGAGTCTGTAATTATAGTCGAAGCCAAGAACGTGGAAGACCAATT
ATATCTGCTGACCACTCAGCTTCCGTCCTTGCTGGCGGACGCTTCATTGG
GGAAGATCCGGCTCTGCGTGATTGATTCCATGTCTGCCCTGTTTCGGGGA
GAGTTCAGCTTGTCCAAAATGGACACATTGGAACGGGCGAAGATGATCTT
TACCATGGCGAAGCAGATGAAACGGCTTTCGGACCGGTGGGGTCTGCCAT
TTGTGGTCACAAACCAGGTAACGGCTGATTTTGCCGCTGCCACCTTCGGG
GTGTGGGAGGGGGGGAATGCCGACGTGGTGGGCGACGGGGTCCAGCCCGC
CTTGGGTCTCTCCTGGTCGAACTGTGTGCATACGCGGTTTCTCCTCAGTC
GCCGGGATGCGAACAACCGAATACCATCCTTCCCGACACCTGGATCGAAT
CCTCCCTCCAATCCCGCGACGGCAGATGCGAGAAGCACTGGCCAAAGCAG
CAGATGGATCCGACACATGCGCCTCCTGCTCTCTCCTTCCCTCCCATCCA
ATTTGTCGTGTCGTTTCGTGTTGGAGACAGCAGGAGTGCGGGGGGTGCGG
AGGACGGAGATGAATGAGGACGGGAGGCCCCGAGAGCGATAG
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protein sequence of rna9077

>rna9077-protein ID=rna9077-protein|Name=rna9077|organism=Nannochloropsis gaditana|type=polypeptide|length=632bp
MHNRWRNHESIKLRMRMKRSLLGTPLPCTACKMSSKRINYLSLTSLWGLK
ELIEDRTLKSLGKLASAVLPPGSAQSPQHGPDSKPTWDISGLDFKAAKEE
FLSVQPEPSIYGYDGLLDRIRATDTPNMVNNVYLDWTGSAIYRASMVNAM
AEDLKQNLYGNTHSINPSSMLTEQKVDAVRERVVRYFNTTLSEYSVIFTS
GATAALHLLSETFPWSNSSRFTYLEQSHNSVLGIRELCLHHGGDFCALRE
SEVNVEHPESSQCNACGHTDKSTPTYMAAAAAAAATQTTTEGQQDQPLPY
HLFAFPAQDNFAGIKYNLSWIDHIQKARDMCGKRGDWRVLLDAAAFVPSS
RLDLGKYTPDFVTLSFYKMFGFPTGLGCLLVHKRSIDILRKLYWGGGSVV
VAMTQEPITVFKGNPCAKYEDGTLNFLSILGLNPGFDSLEEIGIDRITHH
VWALTLWTYEQLRVLRHRNGQPVVRVYGKHDLGDPRVQGGVISFNVLTPE
GTYIGYHHVQKLAARYRFHVRSGCQCNPGACFDYLGISYEQVSMFFLNKD
SCGDEKDVVNGGTLPLGAIRISFGSLTTFEDVQAWVAFLEAFFVDSGEMA
ALGLEEGRKRQGLQNPWAAKPFFVEHTGAAVA
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mRNA from alignment at KK037251.1:281214..283630+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9077 ID=rna9077|Name=rna9077|organism=Nannochloropsis gaditana|type=mRNA|length=2417bp|location=Sequence derived from alignment at KK037251.1:281214..283630+ (Nannochloropsis gaditana)
ATGCACAATAGATGGAGGAATCACGAATCGATAAAACTGAGAATGCGGAT GAAAAGAAGTTTGTTGGGAACACCGCTCCCATGCACTGCATGTAAGATGA GCTCAAAACGAATAAACTACCTGTCGTTGACTTCGCTTTGGGGCTTAAAA GAGCTTATTGAAGACCGCGTTTTTCCACGCGTCTATTGACACATgcattc ttttttaaaaaagcaCGCGGACAGCGTCTAAAGTTAACGCGAGTAAGCGA AGACGACGGCAGTGGTCTTCTTATGACTGACTGCCAGACCTGGAGAACAA TATCTATCACATTCTTGCCTTAAGTCTTTGATCGTCACAAACGACGCCAT CCCCTTCATTGGCCTCCCACCCATACATTGGAAtcatctttccctttcaa aAACTCACGCTAGACCCTAAAGTCACTCGGCAAACTGGCGTCggctgtcc tcccccctggctgTCCAGTGCATGTGTCGATAAAAGCCGAGCCGTTACGC GGGCCCTTCCCCCAAGGCCCATGCTCAGGACCCTGTCGCCCTTTTCTTGA CGTTGCTTGCCGTTCCTTATATTCACCTTCGTCACGCCACTTGACGTCAC TGATGTGCTATCGATGTATTTAATTCCCCCACATAGGCATGACAAGACAA GAAAGACGGCTTGGAGTCAAAATTCATCGACAATCAAGGTTGAccgtctt ttctttcttgctcATTCCTGTGTTCCACGCCAAAGCTGCACAATCCCCAC AACACGGTCCTGATTCGAAACCTACATGGGATATCTCTGGATTGGATTTC AAAGCTGCGAAGGAGGAGTTTTTGTCGGTACAGCCCGAGCCCTCCATCTA TGGCTACGACGGCCTTCTGGACAGGATTCGCGCGACAGATACCCCGAACA TGGTGAATAATGTATATCTTGACTGGACTGGTTCTGCTATCTATCGTGCT AGTATGGTGAATGCTATGGCTGAAGATCTAAAACAAAATCTCTATGGGAA CACGCATAGCATTAATCCCAGCTCCATGCTTACAGAGCAGAAGGTTGATG CCGTTCGAGAACGTGTGGTTCGTTACTTCAACACCACTCTATCCGAGTAC TCCGTTATATTTACGTCAGGTGCCACAGCCGCATTGCATTTATTAAGTGA GACATTTCCCTGGTCAAACAGCAGCCGCTTTACCTACTTGGAACAAAGTC ACAACAGCGTATTGGGGATTCGGGAGTTATGCTTGCACCATGGCGGAGAC TTTTGTGCCCTGCGCGAATCGGAAGTGAACGTGGAGCACCCTGAGTCGTC GCAATGCAACGCTTGCGGGCATACGGATAAAAGTACGCCCACGTATatgg cggcggcagctgcggccGCGGCCACCCAAACAACTACGGAAGGCCAGCAG GACCAGCCTCTGCCCTACCACTTGTTCGCTTTCCCGGCCCAAGATAACTT TGCGGGGATTAAATACAATTTAAGCTGGATCGATCACATTCAGAAGGCGA GAGATATGTGCGGGAAGCGCGGGGATTGGCGGGTCTTGCTTGACGCGGCG GCTTTCGTTCCTTCGAGTCGATTGGATTTGGGTAAGTATACGCCCGACTT TGTGACCCTCTCCTTCTATAAGATGTTCGGATTTCCCACGGGACTGGGCT GTCTGCTGGTGCATAAACGCTCGATCGACATTCTTCGGAAGTTGTattgg gggggaggctccGTGGTCGTGGCCATGACGCAGGAGCCCATTACCGTGTT CAAAGGCAATCCCTGCGCCAAATATGAAGACGGAACTTTGAacttccttt ccattctGGGTCTAAATCCCGGCTTTGATTCTTTGGAAGAGATCGGTATC GACCGGATCACCCACCACGTCTGGGCTCTGACCCTCTGGACTTACGAGCA ACTCCGGGTATTAAGGCATCGGAACGGGCAACCCGTGGTGCGGGTTTACG GGAAGCACGACTTAGGGGACCCAAGGGTGCAGGGGGGCGTGATCAGCTTC AATGTACTGACGCCGGAGGGCACCTATATCGGCTACCACCACGTGCAAAA GCTGGCAGCCCGGTACCGGTTTCACGTTCGCTCGGGGTGCCAGTGTAATC CGGGGGCGTGCTTTGACTACCTAGGCATAAGCTACGAGCAAGTCAGCATG TTCTTCCTGAACAAGGATTCTTGCGGGGACGAAAAGGACGTGGTAAACGG AGGGACCCTGCCTTTGGGGGCCATCCGCATCTCCTTCGGCTCCTTGACCA CCTTCGAGGACGTTCAGGCCTGGGTCGCGTTCTTGGAGGCCTTCTTCGTG GACTCGGGCGAGATGGCAGCCttggggttggaggaagggaggaagcgaca gGGGCTACAAAATCCCTGGGCGGCGAAGCCTTTCTTCGTCGAGCATACGG GGGCGGCTGTGGCgtag
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Coding sequence (CDS) from alignment at KK037251.1:281214..283630+

>rna9077 ID=rna9077|Name=rna9077|organism=Nannochloropsis gaditana|type=CDS|length=5697bp|location=Sequence derived from alignment at KK037251.1:281214..283630+ (Nannochloropsis gaditana)
ATGCACAATAGATGGAGGAATCACGAATCGATAAAACTGAGAATGCGGAT
GAAAAGAAGTTTGTTGGGAACACCGCTCCCATGCACTGCATGTAAGATGA
GCTCAAAACGAATAAACTACCTGTCGTTGACTTCGCTTTGGGGCTTAAAA
GAGCTTATTGAAGACCGCACCCTAAAGTCACTCGGCAAACTGGCGTCggc
tgtcctcccccctggctCTGCACAATCCCCACAACACGGTCCTGATTCGA
AACCTACATGGGATATCTCTGGATTGGATTTCAAAGCTGCGAAGGAGGAG
TTTTTGTCGGTACAGCCCGAGCCCTCCATCTATGGCTACGACGGCCTTCT
GGACAGGATTCGCGCGACAGATACCCCGAACATGGTGAATAATGTATATC
TTGACTGGACTGGTTCTGCTATCTATCGTGCTAGTATGGTGAATGCTATG
GCTGAAGATCTAAAACAAAATCTCTATGGGAACACGCATAGCATTAATCC
CAGCTCCATGCTTACAGAGCAGAAGGTTGATGCCGTTCGAGAACGTGTGG
TTCGTTACTTCAACACCACTCTATCCGAGTACTCCGTTATATTTACGTCA
GGTGCCACAGCCGCATTGCATTTATTAAGTGAGACATTTCCCTGGTCAAA
CAGCAGCCGCTTTACCTACTTGGAACAAAGTCACAACAGCGTATTGGGGA
TTCGGGAGTTATGCTTGCACCATGGCGGAGACTTTTGTGCCCTGCGCGAA
TCGGAAGTGAACGTGGAGCACCCTGAGTCGTCGCAATGCAACGCTTGCGG
GCATACGGATAAAAGTACGCCCACGTATatggcggcggcagctgcggccG
CGGCCACCCAAACAACTACGGAAGGCCAGCAGGACCAGCCTCTGCCCTAC
CACTTGTTCGCTTTCCCGGCCCAAGATAACTTTGCGGGGATTAAATACAA
TTTAAGCTGGATCGATCACATTCAGAAGGCGAGAGATATGTGCGGGAAGC
GCGGGGATTGGCGGGTCTTGCTTGACGCGGCGGCTTTCGTTCCTTCGAGT
CGATTGGATTTGGGTAAGTATACGCCCGACTTTGTGACCCTCTCCTTCTA
TAAGATGTTCGGATTTCCCACGGGACTGGGCTGTCTGCTGGTGCATAAAC
GCTCGATCGACATTCTTCGGAAGTTGTattgggggggaggctccGTGGTC
GTGGCCATGACGCAGGAGCCCATTACCGTGTTCAAAGGCAATCCCTGCGC
CAAATATGAAGACGGAACTTTGAacttcctttccattctGGGTCTAAATC
CCGGCTTTGATTCTTTGGAAGAGATCGGTATCGACCGGATCACCCACCAC
GTCTGGGCTCTGACCCTCTGGACTTACGAGCAACTCCGGGTATTAAGGCA
TCGGAACGGGCAACCCGTGGTGCGGGTTTACGGGAAGCACGACTTAGGGG
ACCCAAGGGTGCAGGGGGGCGTGATCAGCTTCAATGTACTGACGCCGGAG
GGCACCTATATCGGCTACCACCACGTGCAAAAGCTGGCAGCCCGGTACCG
GTTTCACGTTCGCTCGGGGTGCCAGTGTAATCCGGGGGCGTGCTTTGACT
ACCTAGGCATAAGCTACGAGCAAGTCAGCATGTTCTTCCTGAACAAGGAT
TCTTGCGGGGACGAAAAGGACGTGGTAAACGGAGGGACCCTGCCTTTGGG
GGCCATCCGCATCTCCTTCGGCTCCTTGACCACCTTCGAGGACGTTCAGG
CCTGGGTCGCGTTCTTGGAGGCCTTCTTCGTGGACTCGGGCGAGATGGCA
GCCttggggttggaggaagggaggaagcgacagGGGCTACAAAATCCCTG
GGCGGCGAAGCCTTTCTTCGTCGAGCATACGGGGGCGGCTGTGGCgtagA
TGCACAATAGATGGAGGAATCACGAATCGATAAAACTGAGAATGCGGATG
AAAAGAAGTTTGTTGGGAACACCGCTCCCATGCACTGCATGTAAGATGAG
CTCAAAACGAATAAACTACCTGTCGTTGACTTCGCTTTGGGGCTTAAAAG
AGCTTATTGAAGACCGCACCCTAAAGTCACTCGGCAAACTGGCGTCggct
gtcctcccccctggctCTGCACAATCCCCACAACACGGTCCTGATTCGAA
ACCTACATGGGATATCTCTGGATTGGATTTCAAAGCTGCGAAGGAGGAGT
TTTTGTCGGTACAGCCCGAGCCCTCCATCTATGGCTACGACGGCCTTCTG
GACAGGATTCGCGCGACAGATACCCCGAACATGGTGAATAATGTATATCT
TGACTGGACTGGTTCTGCTATCTATCGTGCTAGTATGGTGAATGCTATGG
CTGAAGATCTAAAACAAAATCTCTATGGGAACACGCATAGCATTAATCCC
AGCTCCATGCTTACAGAGCAGAAGGTTGATGCCGTTCGAGAACGTGTGGT
TCGTTACTTCAACACCACTCTATCCGAGTACTCCGTTATATTTACGTCAG
GTGCCACAGCCGCATTGCATTTATTAAGTGAGACATTTCCCTGGTCAAAC
AGCAGCCGCTTTACCTACTTGGAACAAAGTCACAACAGCGTATTGGGGAT
TCGGGAGTTATGCTTGCACCATGGCGGAGACTTTTGTGCCCTGCGCGAAT
CGGAAGTGAACGTGGAGCACCCTGAGTCGTCGCAATGCAACGCTTGCGGG
CATACGGATAAAAGTACGCCCACGTATatggcggcggcagctgcggccGC
GGCCACCCAAACAACTACGGAAGGCCAGCAGGACCAGCCTCTGCCCTACC
ACTTGTTCGCTTTCCCGGCCCAAGATAACTTTGCGGGGATTAAATACAAT
TTAAGCTGGATCGATCACATTCAGAAGGCGAGAGATATGTGCGGGAAGCG
CGGGGATTGGCGGGTCTTGCTTGACGCGGCGGCTTTCGTTCCTTCGAGTC
GATTGGATTTGGGTAAGTATACGCCCGACTTTGTGACCCTCTCCTTCTAT
AAGATGTTCGGATTTCCCACGGGACTGGGCTGTCTGCTGGTGCATAAACG
CTCGATCGACATTCTTCGGAAGTTGTattgggggggaggctccGTGGTCG
TGGCCATGACGCAGGAGCCCATTACCGTGTTCAAAGGCAATCCCTGCGCC
AAATATGAAGACGGAACTTTGAacttcctttccattctGGGTCTAAATCC
CGGCTTTGATTCTTTGGAAGAGATCGGTATCGACCGGATCACCCACCACG
TCTGGGCTCTGACCCTCTGGACTTACGAGCAACTCCGGGTATTAAGGCAT
CGGAACGGGCAACCCGTGGTGCGGGTTTACGGGAAGCACGACTTAGGGGA
CCCAAGGGTGCAGGGGGGCGTGATCAGCTTCAATGTACTGACGCCGGAGG
GCACCTATATCGGCTACCACCACGTGCAAAAGCTGGCAGCCCGGTACCGG
TTTCACGTTCGCTCGGGGTGCCAGTGTAATCCGGGGGCGTGCTTTGACTA
CCTAGGCATAAGCTACGAGCAAGTCAGCATGTTCTTCCTGAACAAGGATT
CTTGCGGGGACGAAAAGGACGTGGTAAACGGAGGGACCCTGCCTTTGGGG
GCCATCCGCATCTCCTTCGGCTCCTTGACCACCTTCGAGGACGTTCAGGC
CTGGGTCGCGTTCTTGGAGGCCTTCTTCGTGGACTCGGGCGAGATGGCAG
CCttggggttggaggaagggaggaagcgacagGGGCTACAAAATCCCTGG
GCGGCGAAGCCTTTCTTCGTCGAGCATACGGGGGCGGCTGTGGCgtagAT
GCACAATAGATGGAGGAATCACGAATCGATAAAACTGAGAATGCGGATGA
AAAGAAGTTTGTTGGGAACACCGCTCCCATGCACTGCATGTAAGATGAGC
TCAAAACGAATAAACTACCTGTCGTTGACTTCGCTTTGGGGCTTAAAAGA
GCTTATTGAAGACCGCACCCTAAAGTCACTCGGCAAACTGGCGTCggctg
tcctcccccctggctCTGCACAATCCCCACAACACGGTCCTGATTCGAAA
CCTACATGGGATATCTCTGGATTGGATTTCAAAGCTGCGAAGGAGGAGTT
TTTGTCGGTACAGCCCGAGCCCTCCATCTATGGCTACGACGGCCTTCTGG
ACAGGATTCGCGCGACAGATACCCCGAACATGGTGAATAATGTATATCTT
GACTGGACTGGTTCTGCTATCTATCGTGCTAGTATGGTGAATGCTATGGC
TGAAGATCTAAAACAAAATCTCTATGGGAACACGCATAGCATTAATCCCA
GCTCCATGCTTACAGAGCAGAAGGTTGATGCCGTTCGAGAACGTGTGGTT
CGTTACTTCAACACCACTCTATCCGAGTACTCCGTTATATTTACGTCAGG
TGCCACAGCCGCATTGCATTTATTAAGTGAGACATTTCCCTGGTCAAACA
GCAGCCGCTTTACCTACTTGGAACAAAGTCACAACAGCGTATTGGGGATT
CGGGAGTTATGCTTGCACCATGGCGGAGACTTTTGTGCCCTGCGCGAATC
GGAAGTGAACGTGGAGCACCCTGAGTCGTCGCAATGCAACGCTTGCGGGC
ATACGGATAAAAGTACGCCCACGTATatggcggcggcagctgcggccGCG
GCCACCCAAACAACTACGGAAGGCCAGCAGGACCAGCCTCTGCCCTACCA
CTTGTTCGCTTTCCCGGCCCAAGATAACTTTGCGGGGATTAAATACAATT
TAAGCTGGATCGATCACATTCAGAAGGCGAGAGATATGTGCGGGAAGCGC
GGGGATTGGCGGGTCTTGCTTGACGCGGCGGCTTTCGTTCCTTCGAGTCG
ATTGGATTTGGGTAAGTATACGCCCGACTTTGTGACCCTCTCCTTCTATA
AGATGTTCGGATTTCCCACGGGACTGGGCTGTCTGCTGGTGCATAAACGC
TCGATCGACATTCTTCGGAAGTTGTattgggggggaggctccGTGGTCGT
GGCCATGACGCAGGAGCCCATTACCGTGTTCAAAGGCAATCCCTGCGCCA
AATATGAAGACGGAACTTTGAacttcctttccattctGGGTCTAAATCCC
GGCTTTGATTCTTTGGAAGAGATCGGTATCGACCGGATCACCCACCACGT
CTGGGCTCTGACCCTCTGGACTTACGAGCAACTCCGGGTATTAAGGCATC
GGAACGGGCAACCCGTGGTGCGGGTTTACGGGAAGCACGACTTAGGGGAC
CCAAGGGTGCAGGGGGGCGTGATCAGCTTCAATGTACTGACGCCGGAGGG
CACCTATATCGGCTACCACCACGTGCAAAAGCTGGCAGCCCGGTACCGGT
TTCACGTTCGCTCGGGGTGCCAGTGTAATCCGGGGGCGTGCTTTGACTAC
CTAGGCATAAGCTACGAGCAAGTCAGCATGTTCTTCCTGAACAAGGATTC
TTGCGGGGACGAAAAGGACGTGGTAAACGGAGGGACCCTGCCTTTGGGGG
CCATCCGCATCTCCTTCGGCTCCTTGACCACCTTCGAGGACGTTCAGGCC
TGGGTCGCGTTCTTGGAGGCCTTCTTCGTGGACTCGGGCGAGATGGCAGC
CttggggttggaggaagggaggaagcgacagGGGCTACAAAATCCCTGGG
CGGCGAAGCCTTTCTTCGTCGAGCATACGGGGGCGGCTGTGGCgtag
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Synonyms
Publications