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Properties
| Property Name | Value |
|---|
| Product | dna repair protein xrcc3 |
| Orig transcript id | gnl|cribi|Naga_100012g28.1923.mrna |
| Orig protein id | gnl|cribi|Naga_100012g28.1923 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:279547..280941 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9076 ID=rna9076|Name=rna9076|organism=Nannochloropsis gaditana|type=mRNA|length=1735bp
ACAGGGTCTCCATGGAGGACGCTGCGATGAATGCTGATACGGATGTGGGA
AAAGGTTTGAAGCCTTTGGGGAGGCGCGGGAGGACGCATTCAAGGGCTGG
AGCATGCACCTCCTTCCTTGCCTCCGTAGTTGCGTTCCTGCTCGCAGACT
CCGGCACGGCTTTTATGCCATTGCGAGTCATTAAAAGCCACACAAGAGCC
GTCACTACGCCAAGTATCTGCATGTCGATTGAGTCGTCGTCATCAAAAGT
CAAACCGCAAGTTGTCGTTGCAGGCGGGGGATTTGGAGGTTTGTACAGCG
CACTCCGCTTGTCCGAGCTCTCGCGCCCGTCGCGATATGCACCTCCCTCC
ATCGACATCACCCTTGTGGACAGGCACGACCGCTTTGTCTTCCTCCCCTT
GCTGTACGAGTTGGCCATGGGGGACGCGAACGAGGAGGAGGTAGCCCCGC
GGTTTGAAAGTCTGCTGGCGTCCACAGGCATCCGCTTTGTGCAGGGGGAA
GTAGAGGCGATCGATCTAGCTGGGAAGTGCGTTCAGGTACAGTCGCAAGG
GGAGGCCACGGAGGTTTCTGAAAGCGCGGTCGAGGCGCCGTCGTCGGGGT
CCTCTAAGTCGCTTGCCTACGACAAACTCGTGCTCGCCTTGGGCTCCGAG
CCAATGCTTCCCCCGGCTGCCTCCCTTCCGCTTTCAGAGGGGTCCCTCTC
TCCCTCCCCCTCCTCGGTCATGCCCTTCTACACCTTGCGGGACGCCCATG
CGCTCCGGCGTCAATTGATGCGCATCGACGCCCTTTCTTCCCCCACACTC
TTCCGCACCGTGGTCGTGGGCGGGGGCTACTCGGGCGTGGAGCTGGCGGC
GAATCTGGCCACACGTTTGGGCCGGGACAAGGGCCGCGTCACCCTGGTGG
AGCGTGGGTACCAGATTCTGGGGAACTCCCCCATGCCTGTGCGCGCCTCG
GCGGGGAAGAGGCTGGAGGAGGAAGGGGTGGAAGTGATGCTGGGTGTGGA
CGTGGTGGAGGTGGACGGCGCGCGGGTGGTGGTGAGGGACAGGGCTGCGG
AGACGCAGGGTAAGGAAGGGGCGGAAGGGGCGGGAGGGGGGGGGAGGGAG
GGGGAGGTGGTCTTGCCTGCTGACTTGGTGGTGTGGACCGCGGGGGCGCG
CGTGAGTCCCGTGGTGGGGGCCATGGAGGGCCTGGAGAAGGATGGACGGG
GGAAATTGGTGACGGACGGAGGGCTTCGGGCGCTGGGCTCGGGGGGGGAC
GTCTACGTGGTCGGGGACAATGCCGCCGTCATGGGCTACCGGGGTGGAGG
GCCCCCGGGGAGTGTGGGGGAAAAGGAGCAGGTGCTTCCCTCCACCGCTC
AGGTCGCGTTCCAGGAGTCCGAGGTGGCGGCTTGGAACTTGTGGTCGTCT
CTGACGCCCGGGGCCCCGGGCCCCCTGCGCTTCCAGTACACGCCTTTGGG
GGAGATGCTCACCCTGGGCCCTGCGGACGCGACCATCTCGGGGCTCCAGG
GCATGTTCAATTTGGAAGGGCCGTCGGCCAGCCTGGCCAGGCGCTTGGTG
TACATTATGCGGATGCCGACGGGTTCGCAGCGGCTGAAAGCGGCCAAGGC
GTGGGCCAAAGGACGGACAGCGAAGGTGAAGGGTGCGTTTCAGGAGGCCT
TCGCGGAGGGAAACGTTTGGCAGAAATGAAAAGGATGCATCTTTTTGGGG
GGAATGGAGGAAAATAAAGGAACGTACAGCAGACG back to topprotein sequence of rna9076 >rna9076-protein ID=rna9076-protein|Name=rna9076|organism=Nannochloropsis gaditana|type=polypeptide|length=363bp
MTAATLTATTTSSTETRLNNAGGKEIKSAAGFDLFPRPPRTAYDLYQDEK
HTRRVSLGCPVLDAAFRGGLPGHGVVEVSGMAGAGKTQLMLQLLVQQVRD
AEAEWRRAKYATPFVAGRSFYLSTEGPLPAKRLAEMAAATCPEDSGFAQR
VLESVIIVEAKNVEDQLYLLTTQLPSLLADASLGKIRLCVIDSMSALFRG
EFSLSKMDTLERAKMIFTMAKQMKRLSDRWGLPFVVTNQVTADFAAATFG
VWEGGNADVVGDGVQPALGLSWSNCVHTRFLLSRRDANNRIPSFPTPGSN
PPSNPATADARSTGQSSRWIRHMRLLLSPSLPSNLSCRFVLETAGVRGVR
RTEMNEDGRPRER back to topmRNA from alignment at KK037251.1:279547..280941+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9076 ID=rna9076|Name=rna9076|organism=Nannochloropsis gaditana|type=mRNA|length=1395bp|location=Sequence derived from alignment at KK037251.1:279547..280941+ (Nannochloropsis gaditana)
ATGACAGCAGCGACGCTGACCGCAACTACCACTTCGAGCACCGAGACGAG
GCTCAACAAtgccggaggaaaggagatcAAGTCGGCGGCTGGCTTCGACC
TCttccctcggccccctcGCACAGCCTATGATTTATACCAAGTACGTTGA
GTCTTGAGACAAGGATTCGGTGGAAGGGTGGCATTGGAGAAGGACTGGCT
TGGGTGGTTTCAAAAAGAAGGAATGAGGGGAAACGAATAAAAGGATGCGG
TTTGGAGTGCGTGAAATGGTTAAGACCCATCATAAACGTATTGCGAGATA
GGCTCTGCGCCATCACAAGGATGGATTGCCTATAAACATAGTAAATTGGC
CTTTTCTTGCTCGTCTATCGCCCCACACATTGGGCCTTGTCTTGGAAAGG
ATAGCGtccttacctcctcccatccctgcaCGCCCGCCCTACAGGATGAA
AAACACACGCGCCGAGTTTCCCTCGGTTGCCCTGTCCTGGATGCCGCCTT
TCGTGGAGGCCTTCCCGGCCATGGGGTTGTGGAAGTCAGCGGTATGGCAG
GCGCGGGCAAGACCCAATTGatgctccagctccttgttCAGCAGGTGAGG
GACGCCGAGGCGGAGTGGCGACGTGCCAAGTACGCCACGCCTTTTGTGGC
AGGCCGGTCTTTTTATCTGTCGACCGAAGGACCGTTGCCGGCGAAACGGT
TGGCGGAGATGGCGGCCGCGACTTGTCCGGAGGACAGTGGCTTCGCCCAA
CGGGTGTTGGAGTCTGTAATTATAGTCGAAGCCAAGAACGTGGAAGACCA
ATTATATCTGCTGACCACTCAGCTTCCGTCCTTGCTGGCGGACGCTTCAT
TGGGGAAGATCCGGCTCTGCGTGATTGATTCCATGTCTGCCCTGTTTCGG
GGAGAGTTCAGCTTGTCCAAAATGGACACATTGGAACGGGCGAAGATGAT
CTTTACCATGGCGAAGCAGATGAAACGGCTTTCGGACCGGTGGGGTCTGC
CATTTGTGGTCACAAACCAGGTAACGGCTGATTTTGCCGCTGCCACCTTc
ggggtgtgggagggggggaatgccGACGTGGTGGGCGACGGGGTCCAGCC
CGCCTTGGGTCTCTCCTGGTCGAACTGTGTGCATACGCGGTTTCTCCTCA
GTCGCCGGGATGCGAACAACCGAATACCATCCTTCCCGACACCTGGATCG
aatcctccctccaatccCGCGACGGCAGATGCGAGAAGCACTGGCCAAAG
CAGCAGATGGATCCGACACATGCGCCTcctgctctctccttccctcccat
ccaatTTGTCGTGTCGTTTCGTGTTGGAGACAGCAGGAGTGCGGGGGGTG
CGGAGGACGGAGATGAATGAGGACGGGAGGCCCCGAGAGCGATAG back to topCoding sequence (CDS) from alignment at KK037251.1:279547..280941+ >rna9076 ID=rna9076|Name=rna9076|organism=Nannochloropsis gaditana|type=CDS|length=2184bp|location=Sequence derived from alignment at KK037251.1:279547..280941+ (Nannochloropsis gaditana)
ATGACAGCAGCGACGCTGACCGCAACTACCACTTCGAGCACCGAGACGAG
GCTCAACAAtgccggaggaaaggagatcAAGTCGGCGGCTGGCTTCGACC
TCttccctcggccccctcGCACAGCCTATGATTTATACCAAGATGAAAAA
CACACGCGCCGAGTTTCCCTCGGTTGCCCTGTCCTGGATGCCGCCTTTCG
TGGAGGCCTTCCCGGCCATGGGGTTGTGGAAGTCAGCGGTATGGCAGGCG
CGGGCAAGACCCAATTGatgctccagctccttgttCAGCAGGTGAGGGAC
GCCGAGGCGGAGTGGCGACGTGCCAAGTACGCCACGCCTTTTGTGGCAGG
CCGGTCTTTTTATCTGTCGACCGAAGGACCGTTGCCGGCGAAACGGTTGG
CGGAGATGGCGGCCGCGACTTGTCCGGAGGACAGTGGCTTCGCCCAACGG
GTGTTGGAGTCTGTAATTATAGTCGAAGCCAAGAACGTGGAAGACCAATT
ATATCTGCTGACCACTCAGCTTCCGTCCTTGCTGGCGGACGCTTCATTGG
GGAAGATCCGGCTCTGCGTGATTGATTCCATGTCTGCCCTGTTTCGGGGA
GAGTTCAGCTTGTCCAAAATGGACACATTGGAACGGGCGAAGATGATCTT
TACCATGGCGAAGCAGATGAAACGGCTTTCGGACCGGTGGGGTCTGCCAT
TTGTGGTCACAAACCAGGTAACGGCTGATTTTGCCGCTGCCACCTTcggg
gtgtgggagggggggaatgccGACGTGGTGGGCGACGGGGTCCAGCCCGC
CTTGGGTCTCTCCTGGTCGAACTGTGTGCATACGCGGTTTCTCCTCAGTC
GCCGGGATGCGAACAACCGAATACCATCCTTCCCGACACCTGGATCGaat
cctccctccaatccCGCGACGGCAGATGCGAGAAGCACTGGCCAAAGCAG
CAGATGGATCCGACACATGCGCCTcctgctctctccttccctcccatcca
atTTGTCGTGTCGTTTCGTGTTGGAGACAGCAGGAGTGCGGGGGGTGCGG
AGGACGGAGATGAATGAGGACGGGAGGCCCCGAGAGCGATAGATGACAGC
AGCGACGCTGACCGCAACTACCACTTCGAGCACCGAGACGAGGCTCAACA
AtgccggaggaaaggagatcAAGTCGGCGGCTGGCTTCGACCTCttccct
cggccccctcGCACAGCCTATGATTTATACCAAGATGAAAAACACACGCG
CCGAGTTTCCCTCGGTTGCCCTGTCCTGGATGCCGCCTTTCGTGGAGGCC
TTCCCGGCCATGGGGTTGTGGAAGTCAGCGGTATGGCAGGCGCGGGCAAG
ACCCAATTGatgctccagctccttgttCAGCAGGTGAGGGACGCCGAGGC
GGAGTGGCGACGTGCCAAGTACGCCACGCCTTTTGTGGCAGGCCGGTCTT
TTTATCTGTCGACCGAAGGACCGTTGCCGGCGAAACGGTTGGCGGAGATG
GCGGCCGCGACTTGTCCGGAGGACAGTGGCTTCGCCCAACGGGTGTTGGA
GTCTGTAATTATAGTCGAAGCCAAGAACGTGGAAGACCAATTATATCTGC
TGACCACTCAGCTTCCGTCCTTGCTGGCGGACGCTTCATTGGGGAAGATC
CGGCTCTGCGTGATTGATTCCATGTCTGCCCTGTTTCGGGGAGAGTTCAG
CTTGTCCAAAATGGACACATTGGAACGGGCGAAGATGATCTTTACCATGG
CGAAGCAGATGAAACGGCTTTCGGACCGGTGGGGTCTGCCATTTGTGGTC
ACAAACCAGGTAACGGCTGATTTTGCCGCTGCCACCTTcggggtgtggga
gggggggaatgccGACGTGGTGGGCGACGGGGTCCAGCCCGCCTTGGGTC
TCTCCTGGTCGAACTGTGTGCATACGCGGTTTCTCCTCAGTCGCCGGGAT
GCGAACAACCGAATACCATCCTTCCCGACACCTGGATCGaatcctccctc
caatccCGCGACGGCAGATGCGAGAAGCACTGGCCAAAGCAGCAGATGGA
TCCGACACATGCGCCTcctgctctctccttccctcccatccaatTTGTCG
TGTCGTTTCGTGTTGGAGACAGCAGGAGTGCGGGGGGTGCGGAGGACGGA
GATGAATGAGGACGGGAGGCCCCGAGAGCGATAG back to top
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