rna9064, rna9064 (mRNA) Nannochloropsis gaditana

Overview
Namerna9064
Unique Namerna9064
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length967
Alignment locationKK037251.1:249769..250460 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g17.1967.mrna
Orig protein idgnl|cribi|Naga_100012g17.1967
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:249769..250460 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100012g17gene8791Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9064rna9064-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21635.1cds9034Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9064 ID=rna9064|Name=rna9064|organism=Nannochloropsis gaditana|type=mRNA|length=967bp
ACCTCCGACTACAATGTCAAAACTCATCTATGATCCATGCATTAATTATC
ATCCTCACAATTTTAAAGGGCAACTCAAGTATGGTCCGGATCGTCAACGC
GGTGACCGGTGCTACAGCTTACACACCACCACCTTTTACACACGCTGGTG
TCCCCATGACAACAGAGGACCTTCATGCACTGAACGGCAAGTCTGTCACC
CTTATCGGCTTCGGGAGCCTCTTGAGCGAGACGTCTTCGAGGACAACATT
CCCACAGCTTGTTAATTTTAGACTCGGGCGTGTCAATGGTTACCGAAGAC
TCTTTCGGCATCCTGCTGCAATATTTTTTGAACGGGGCATTGCCCGCCCT
GAGACTAAAGAAATTTCTAGTTTGAGCGTGGAGTACGTGGGCGAGGGTGC
TACTGGTGAGGAGGGCTTTGTATGTAGTCTCTTCGACGTCATGCACTTTA
ATTTGCAAGACTTTTTGGATCGAGAAGAAGAATTTGCCTTCACGATGGCA
GAGTTCACGGAATTGGGGGAAGGTGATAAAAGAGGGAAGGGCCTTATGTG
TCTCGCGACGACGGATGCTCATGTTGAGGACCGTTGGGGAAAAGGGTATA
TTAAAAGAAAATATGGTGTGCACGGTTTGAATAGCATCTGGGATGAGTGG
GGGCCGGAGAGCGGAATCCTGCCCTGTCCTGTCTACCTGCGGCACTGTGT
CCTATCCGCTCGTAAACAAGGACAGGATGGACCGGCTTTTCGAAGTTTTC
TCCGTGAAACGTTCTTGGCCGATCGAAAAACGACGATCGAAGAGCATTTG
GCGCGGCGGCCCGATATTTTACAGACAAATCCGCCCCCCAGCGTGTCGGG
CCGTTACAGTGGATAGTCATCATTGGTCCCAGGAGAACTTAGACAAGAGA
GCGCCTGCCAACGAGCGCGCGACACAGGATTATTTGAAAGCATTCAAGAG
AGTTTACTTTTCTACCG
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protein sequence of rna9064

>rna9064-protein ID=rna9064-protein|Name=rna9064|organism=Nannochloropsis gaditana|type=polypeptide|length=192bp
MTTPAAQHYVSGSVAMGTDSGNAARTDEPEDAVDPSLLIATKLTPVKRPF
QTEMTISKDTEKRARVNALEDGEDVPSNQSTNRIINSVEPLPRRQLILTL
DRSEEPKYSQETNQPHDFDSHTEDQEDMDVSPSDPATTMPLHDPVHPDSS
IDRRATSPTRSCENAEICETLQKFLSQTREDALCSRMWRVTM
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mRNA from alignment at KK037251.1:249769..250460+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9064 ID=rna9064|Name=rna9064|organism=Nannochloropsis gaditana|type=mRNA|length=692bp|location=Sequence derived from alignment at KK037251.1:249769..250460+ (Nannochloropsis gaditana)
ATGACAACTCCTGCTGCACAGCATTATGTCTCAGGCTCGGTGGCGATGGG
AACGGATTCTGGAAATGCTGCTCGCACAGACGAGCCGGAGGATGCTGTCG
ATCCTTCTCTGCTCATTGCAACCAAGCTTACACCTGTCAAGCGGCCATTC
CAAACAGAAATGACTATTTCTAAAGATACAGAGAAACGCGCACGCGTGAA
TGCACTGGAAGACGGAGAAGATGTCCCTAGCAACCAATCCACAAATCGAA
TTATCAACAGTGTGGAGCCACTACCCCGGCGCCAATTAATTCTGACTCTT
GATAGGAGCGAGGAACCAAAATATTCGCAAGAGACAAATCAACCCCATGA
TTTCGATTCCCATACAGAAGACCAAGAAGATATGGACGTGTCTCCATCGG
ATCCCGCGACAACTATGCCTCTACATGATCCCGTGCACCCCGATTCTTCT
ATAGATAGGAGAGCAACTTCCCCAACAAGAAGTTGCGAAAATGCCGAGAT
TTGTGAAACCTTGCAGAAATTTTTGTCTCAAACAAGAGAAGATGCTTTGT
GCTCCAGGTCTAGTGACGCTGGCACGAAAAGCGCGTCGCCGAAGCCACgt
cccccatctccttcctccatgtacACATGCCCACTGTGCTTGTCCCTGCT
TGTTCGGCCCATCACTTTAGAATGTGGCGCGTCACTATGTGA
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Coding sequence (CDS) from alignment at KK037251.1:249769..250460+

>rna9064 ID=rna9064|Name=rna9064|organism=Nannochloropsis gaditana|type=CDS|length=1158bp|location=Sequence derived from alignment at KK037251.1:249769..250460+ (Nannochloropsis gaditana)
ATGACAACTCCTGCTGCACAGCATTATGTCTCAGGCTCGGTGGCGATGGG
AACGGATTCTGGAAATGCTGCTCGCACAGACGAGCCGGAGGATGCTGTCG
ATCCTTCTCTGCTCATTGCAACCAAGCTTACACCTGTCAAGCGGCCATTC
CAAACAGAAATGACTATTTCTAAAGATACAGAGAAACGCGCACGCGTGAA
TGCACTGGAAGACGGAGAAGATGTCCCTAGCAACCAATCCACAAATCGAA
TTATCAACAGTGTGGAGCCACTACCCCGGCGCCAATTAATTCTGACTCTT
GATAGGAGCGAGGAACCAAAATATTCGCAAGAGACAAATCAACCCCATGA
TTTCGATTCCCATACAGAAGACCAAGAAGATATGGACGTGTCTCCATCGG
ATCCCGCGACAACTATGCCTCTACATGATCCCGTGCACCCCGATTCTTCT
ATAGATAGGAGAGCAACTTCCCCAACAAGAAGTTGCGAAAATGCCGAGAT
TTGTGAAACCTTGCAGAAATTTTTGTCTCAAACAAGAGAAGATGCTTTGT
GCTCCAGAATGTGGCGCGTCACTATGTGAATGACAACTCCTGCTGCACAG
CATTATGTCTCAGGCTCGGTGGCGATGGGAACGGATTCTGGAAATGCTGC
TCGCACAGACGAGCCGGAGGATGCTGTCGATCCTTCTCTGCTCATTGCAA
CCAAGCTTACACCTGTCAAGCGGCCATTCCAAACAGAAATGACTATTTCT
AAAGATACAGAGAAACGCGCACGCGTGAATGCACTGGAAGACGGAGAAGA
TGTCCCTAGCAACCAATCCACAAATCGAATTATCAACAGTGTGGAGCCAC
TACCCCGGCGCCAATTAATTCTGACTCTTGATAGGAGCGAGGAACCAAAA
TATTCGCAAGAGACAAATCAACCCCATGATTTCGATTCCCATACAGAAGA
CCAAGAAGATATGGACGTGTCTCCATCGGATCCCGCGACAACTATGCCTC
TACATGATCCCGTGCACCCCGATTCTTCTATAGATAGGAGAGCAACTTCC
CCAACAAGAAGTTGCGAAAATGCCGAGATTTGTGAAACCTTGCAGAAATT
TTTGTCTCAAACAAGAGAAGATGCTTTGTGCTCCAGAATGTGGCGCGTCA
CTATGTGA
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Synonyms
Publications