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Properties
| Property Name | Value |
|---|
| Product | ankyrin repeat protein |
| Orig transcript id | gnl|cribi|Naga_100804g1.8731.mrna |
| Orig protein id | gnl|cribi|Naga_100804g1.8731 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:188750..190518 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9043 ID=rna9043|Name=rna9043|organism=Nannochloropsis gaditana|type=mRNA|length=2617bp
TATCATCGCCCATGTGCCCTTTGAGCGACATAGGCTGCGTGCTCCTCCAG
AACAACCACCTGGTTTGATTGATAGATGGTCTCGTGCCACGAGGCCGAGC
AGATAATCACCTAATTCATTACATACACGTAGGCCATTGACAGCATAAGT
GCTTTCTTAGGCCGCTTTTAAAAAGTTTGAAGCGTCGTGCTTTGTTTTTA
CACAGCCAATGGATGACAGGACGGGAAAAACGAAAAATAAATCGCTCAGC
ACCGTAACATTTGCCGAGGCGCATAGCAGCAGAAGGAATGAGAATACGAC
GATCACCATGCGTCAGCAGTTTTGTGGCGATGATGTCAACGATGCAGAAT
ACTACTACGAGCAGATCGAGACGGACTGCAGGAGTCTGGAGGAGAACGCC
AAAAGACTGGGTGCTGCTAACTGGGATCAAGTACAATGCGGAGACGCAGC
AACTGAAGGAAGAGATGAAAATTTGACAAACTCAAGAAATCGGAATCCGA
TAGAGACACAAACCAAGATAGAAAGGGTGTCAAGTCTGGTACCAGGTGAA
AACTTGGAGGGCTGCTCGACGTCCCAAGTGGGCCACTCATTGACGAGTCC
GGCACATCAGATGCCTGCTTCCTCCCAAAAATGCACGCGCATATCTAGCC
GCGGGGATAAAACTGGCATTCACACAATGCGTTTGCCCTCATCGGCGCCC
CTGCCAGAGTTGACCCACCAGGAGCACGTGTATTCTGGCCCCGAAATCTC
CCCAGATATCGACCGCAGCCAAAGTCGTTCGAATGGGGACCTATCACCGC
CACTGCCCCACAGCACTTTGACAAACCCTACAGCAACCATGCCTACGACT
CATCTATCACCTACTACCGTTGAAAGTCCGCCCAAGCGTGAGCCCGCGTT
GTCCGTGACGTCTCGACCGCCTTCTTCCAACCAAGAATCCTCGTCCTCCC
AATCCCATGGGGTCATCACCGCCTTGATGGCCACCCTGAGAGCACATACG
ATTGGAAATGATCTCCCAGACGCCCTTCTTACGACGCACTGCCAGGGGCT
TGTTAAGATGTTGCGGGAAACCGCGGCCCTGAACCGCTTCATCCTCGGAG
AAAGCGCCCTACTCGGCGACAGTCAAGCCTACATGGACGTCTGCACCCAC
CATGTCCAGAGATACGCCACCAGACAGCTGGGTAGCCTGAGGATCCTCCG
GGAGGATTTCCAAGACAAGCACGCGGCCCTGCAGAAAGAGCTGCGGGGGC
TGCGGGAACAGGCCTCGAGCCTGCGAGCACGTGTCTTCCAGGCGGCCTGG
CCGGAGGAGAAGAAGACCGTCATCCTCGCTGCCCTCCAGCGATATCTCCA
CGTGGATCAGCCAGGCGGTGAGCTTCAGACCCTGGATCTGACGGAATCTG
CGATCGGGGCCGTGCAAAAACTCCGGCGCCAGCTGCCCCGCCTCCCCGAG
GAGGCCGACGCCCTCCGGGAGGTCTTTGGGAAGATTAAACGGGTGACCCG
GACCTTGGTGGCCTTGGGGCTGACCACGGAGGAACAGACATCGAGCGCCT
GGGAAAGCGTCATGCAGCTTCTGACCTACCGCCCCATGGGCTTCGTCCTG
GAGGAGGCGGGCCGCGCCTGGCGCGAGCTCAAAGACGTTAAACTGCAGGA
GGCTCAACGCCGGTTGGAGCAAAAAGGGCGTCTGACCGCCTTGCTCGAGA
GGGCGGGCAGCCCCCCGATGGAGGAGACAGGGATGCAGCAAGAGGCTGGC
ATCTCAGAGGCGCTGGAAATGGAAGGCGGACGAAGAAAGAGCGTGGAAAG
CTGCACTAGTGACAGGAGCCTTGGGAGGAGCAGTTGGGGTAGCAAAAGCC
GTCGCAGCAGCAGCAGCAGCTGTAGCAGTGGTACGGCTGGGGAGAGAGAA
TCTGTATTAGAGGAAGATGACCCGGAAAGACCGCGCGATTCCTCGGAGAC
CAGCCACACCCAGACACCCCCCGCCGGCAGCAACATGACGGCGCCATGGG
CGAGCGCCTCGAGCCGCAAAAGTTCTCGGTCGAGGCTCCTGCGGAATGGG
CCTTCCCCCACCTCCTCCCCTTCCTCTCCTTCCACAGCCCCGCCATTTCC
CCGTTCTGCCACCCGTCCTCCAGCACGGTCCAGCATGTACGTGGTCGGGA
CCTCCGCCAGTGCCATGTTGGGAGGCGCCCCTGTCCTTACCAATCCTGGA
GGAGGGGCCGGCGGAGGGCGGGGTAGAGGGCCACGGGCATCCACGGGGAC
AGGGAAGTCGGCCGGGACGGTGGCGGCAGCCGCGGTGCCTACCCGCCGGA
CGACCCCGCCTCCTTCCACCACCACCGGGAGAGGAGCCAACGCAGGCTCT
GGGAGCAAGCTTCACGTCCGAGGAGCACCAGGCGATGACGCTTGCCTCGG
GATCCCGGTCACGGAGGCCCTGTCCGGGAGGCACGAGGGTCTCTCCTCCG
CTGTGGATGCTGGCAGTAGCATCACCCCACACGAGAGCACGGCCACAGCC
GGTAACCAGCCGGGCAAGGCCAGCCATATATCGAGAAGCACTTGCAGCAG
TAGGAGCAAGGGTATGTCTCAGATTTCAGCGAGCCCGGACACAAGAGGAT
GGCAGCAGCTTCCGTAG back to topprotein sequence of rna9043 >rna9043-protein ID=rna9043-protein|Name=rna9043|organism=Nannochloropsis gaditana|type=polypeptide|length=547bp
MSKSERKAARIHRAVAEGDDCVVIDLTKPCCFKLASIVEARDPITDGTPL
LTAAERGDVGIGKILLSRGADVHAVDSDMRTAMHVASLHNHVPFLDLLLD
HGANVDAPNREGMTPLFLAIHLYGSRDDVQGKGVKAIRFLLSQGTNIKIC
SGPEEHTPFLRAVALGHQDIVSLFLTCGRSGREEGKEEGVVGVDQDRDAH
GRTGFMLAIAQGSLEMAALLLQHGADMEAKDKAGMTALAWAVGRPEKLTL
KFLLDRGANVRIQDTDSGATPLMLAAQNGDVGLVQLLVEGEADLESKDGR
GYTALMHAAAKGHSRVVSYLMDQTALQDSQKDPTSAPARRNRGRGSDPAS
ARASDPPSQYASPEDVAATEEIKSLVRRAKNCGAPILPSAPTVRKEKLDP
LHPSILLAFEPPRPTAACPKLGVLKYTAECFAWEEAKGEEGEAGGEATRR
EAEDREGPVAVVEGVGQGQSPFVFRGLERGRWYLFKVHAQSEGGRGLSSR
TDPIFLATTPLGAPEMKEAVVEAVVEEEEEEEEEEEEEEEEGRRRRG back to topmRNA from alignment at KK037251.1:188750..190518+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9043 ID=rna9043|Name=rna9043|organism=Nannochloropsis gaditana|type=mRNA|length=1769bp|location=Sequence derived from alignment at KK037251.1:188750..190518+ (Nannochloropsis gaditana)
GCTTAGTCAACGTAATGGGCCTTTGATTTTTTGTCAGTCACAGGCTTCGC
GAAAATCCTTCTCACCGCTGCATATCATTCACCTTATCTCTACAATTCGC
ACTCTTGCATTTAGGGGGAAAAATCCACCATGAGCAAGAGTGAAAGAAAG
GCCGCTCGGATTCATCGTGCAGtggcggaaggagacgatTGTGTGGTAAT
TGATCTGACAAAACCCTGTTGCTTCAAGCTTGCTTCCATTGTGGAAGCGC
GTGACCCCATTACGGATGGGACACCCCTTTTGACGGCCGCCGAGAGGGGG
GACGTGGGCATTGGCAAGATCCTTCTCTCCAGAGGCGCCGATGTGCACGC
TGTCGACAGTGACATGCGCACTGCCATGCACGTGGCGTCCCTCCACAACC
ATGTCCCGTTCTTGGACCTACTCCTGGACCATGGGGCGAACGTGGATGCC
CCCAACCGGGAGGGGATGACGCCTCTGTTCCTTGCCATCCATTTGTACGG
ATCCCGAGATGATGTTCAGGGTAAGGGCGTGAAGGCGATTCGTTTCCTCC
TGAGCCAGGGGACCAACATCAAGATTTGCTCAGGGCCGGAGGAACACACC
CCCTTCTTGCGGGCGGTGGCGCTTGGGCACCAGGACATCGTGTCGCTGTT
TTTGACCTGTGGGAggtcggggcgggaggaagggaaggaggaaggggtgg
tgggcgtggaCCAGGACCGAGACGCGCACGGTCGGACTGGATTTATGCTG
GCCATCGCCCAGGGTTCCTTGGAAATGGCCGCTTTGCTCCTGCAGCACGG
GGCGGAcatggaggcgaaggacaaggcggggatgACGGCCTTGGCATGGG
CCGTGGGTCGTCCGGAGAAGTTGACGCTGAAGTTTCTGCTCGACCGCGGC
GCCAATGTTCGGATCCAGGACACGGACTCAGGGGCCACGCCCTTGATGCT
GGCTGCCCAGAATGGGGACGTGGGGCTGGTCCAGCTGctcgtggaagggg
aggcggacttGGAATCGAAGGACGGTCGGGGTTACACTGCCTTGATGCAC
GCGGCCGCCAAGGGGCATTCCCGTGTCGTCAGCTACCTGATGGACCAGAC
CGCCCTCCAGGACTCGCAAAAAGACCCCACCTCCGCGCCCGCACGCCGGA
ACCGGGGCAGGGGCTCGGATCCGGCCTCGGCCCGCGCCTCCGACCCTCCG
TCGCAATATGCCTCCCCGGAAGATGTGGCGGCCACAGAGGAGATCAAATC
CTTGGTCCGTCGCGCCAAAAATTGCGGGGCGCCGATCTTGCCCAGCGCCC
CCACAGtccggaaggagaagctcgATCCTTTGCACCCCTCCATTCTCCTG
GCCTTCGAGCCCCCACGTCCTACGGCTGCCTGCCCCAAGCTCGGCGTCTT
GAAGTACACCGCCGAGTGCTttgcctgggaggaggccaaaggggaggagg
gggaggcagggggggaggcaacaagaagggaggcggaggatagGGAAGGc
ccggtggcggtggtggagggcgtggggcaGGGTCAgtctcccttcgtctt
ccgtGGTCTCGAGAGGGGCCGCTGGTATCTCTTCAAAGTCCACGCTCagt
ccgagggaggacgagggttGTCGAGCCGcaccgatccgatcttcttGGCC
ACCACGCCCCTCGGGGCCccggagatgaaggaggcggtggtggaggcggt
ggtggaggaagaggaggaggaggaggaggaggaggaggaggaggaggaag
aggggaggaggaggagggg back to topCoding sequence (CDS) from alignment at KK037251.1:188750..190518+ >rna9043 ID=rna9043|Name=rna9043|organism=Nannochloropsis gaditana|type=CDS|length=1640bp|location=Sequence derived from alignment at KK037251.1:188750..190518+ (Nannochloropsis gaditana)
ATGAGCAAGAGTGAAAGAAAGGCCGCTCGGATTCATCGTGCAGtggcgga
aggagacgatTGTGTGGTAATTGATCTGACAAAACCCTGTTGCTTCAAGC
TTGCTTCCATTGTGGAAGCGCGTGACCCCATTACGGATGGGACACCCCTT
TTGACGGCCGCCGAGAGGGGGGACGTGGGCATTGGCAAGATCCTTCTCTC
CAGAGGCGCCGATGTGCACGCTGTCGACAGTGACATGCGCACTGCCATGC
ACGTGGCGTCCCTCCACAACCATGTCCCGTTCTTGGACCTACTCCTGGAC
CATGGGGCGAACGTGGATGCCCCCAACCGGGAGGGGATGACGCCTCTGTT
CCTTGCCATCCATTTGTACGGATCCCGAGATGATGTTCAGGGTAAGGGCG
TGAAGGCGATTCGTTTCCTCCTGAGCCAGGGGACCAACATCAAGATTTGC
TCAGGGCCGGAGGAACACACCCCCTTCTTGCGGGCGGTGGCGCTTGGGCA
CCAGGACATCGTGTCGCTGTTTTTGACCTGTGGGAggtcggggcgggagg
aagggaaggaggaaggggtggtgggcgtggaCCAGGACCGAGACGCGCAC
GGTCGGACTGGATTTATGCTGGCCATCGCCCAGGGTTCCTTGGAAATGGC
CGCTTTGCTCCTGCAGCACGGGGCGGAcatggaggcgaaggacaaggcgg
ggatgACGGCCTTGGCATGGGCCGTGGGTCGTCCGGAGAAGTTGACGCTG
AAGTTTCTGCTCGACCGCGGCGCCAATGTTCGGATCCAGGACACGGACTC
AGGGGCCACGCCCTTGATGCTGGCTGCCCAGAATGGGGACGTGGGGCTGG
TCCAGCTGctcgtggaaggggaggcggacttGGAATCGAAGGACGGTCGG
GGTTACACTGCCTTGATGCACGCGGCCGCCAAGGGGCATTCCCGTGTCGT
CAGCTACCTGATGGACCAGACCGCCCTCCAGGACTCGCAAAAAGACCCCA
CCTCCGCGCCCGCACGCCGGAACCGGGGCAGGGGCTCGGATCCGGCCTCG
GCCCGCGCCTCCGACCCTCCGTCGCAATATGCCTCCCCGGAAGATGTGGC
GGCCACAGAGGAGATCAAATCCTTGGTCCGTCGCGCCAAAAATTGCGGGG
CGCCGATCTTGCCCAGCGCCCCCACAGtccggaaggagaagctcgATCCT
TTGCACCCCTCCATTCTCCTGGCCTTCGAGCCCCCACGTCCTACGGCTGC
CTGCCCCAAGCTCGGCGTCTTGAAGTACACCGCCGAGTGCTttgcctggg
aggaggccaaaggggaggagggggaggcagggggggaggcaacaagaagg
gaggcggaggatagGGAAGGcccggtggcggtggtggagggcgtggggca
GGGTCAgtctcccttcgtcttccgtGGTCTCGAGAGGGGCCGCTGGTATC
TCTTCAAAGTCCACGCTCagtccgagggaggacgagggttGTCGAGCCGc
accgatccgatcttcttGGCCACCACGCCCCTCGGGGCCccggagatgaa
ggaggcggtggtggaggcggtggtggaggaagaggaggaggaggaggagg
aggaggaggaggaggaggaagaggggaggaggaggagggg back to top
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