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Properties
| Property Name | Value |
|---|
| Product | Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 |
| Orig transcript id | gnl|cribi|Naga_100863g2.3404.mrna |
| Orig protein id | gnl|cribi|Naga_100863g2.3404 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:159307..161806 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9032 ID=rna9032|Name=rna9032|organism=Nannochloropsis gaditana|type=mRNA|length=887bp
CGAGTCTGCCCATCAATCACGGAGATCTCACGAACATCCAACGGCCACGG
GCATGTGACTGTCTCAAAGAGTCGAAAACAGGGGCTTGAAGGAGACCATG
AGTGACTACGACTACAACGACGAGACAAGTGCCAGCCAAAATGGCGGCGC
GCCGGAGACAATGTACAGGGTACGTGCAAAGCGACGGGCATATGAACCTT
GCGATGCGCTGGACAACGAAGCAAAACTTAGTCAGTCATGTTGGTATTTG
CGTTGTCAGTTATGTGACCATCGTCCCTTTGGAGGCCGGCGGGGCTAAAC
GGGCACCAGGTTGCTGCTGGCACCAGGACAGCCATGCGTGCTCTGTTTGC
CGTGCCCTCGCAAAGCACAATGAAGGTTCTCATTTTCTCGCATACATTCT
TCTCATAATCATGGGCGCTTTGTACGCTGACCATCGCTGTCTGGACGGCA
GAGCACGGGATCAGGTAAGTCCCTCCTCTGCCCCCTTCATACTTGCAAAC
ATTAACCCCATGTCACCCCCTGCCCTCGAGAGCCGCAGTCCTAGACTCGC
CAACATATTTTCCACATCACTGACACAACCTTCGCCCTTTTCTCATTCCT
GTCCACCCAGCCCCCGGGGAAGGGGGCCCTACGTCCTACGCAGAGTTGGA
GGAGATGCCCACGGAGCTGCCGTCCTCTTCGGCGTTGGATGCCTTCTTGG
AGGAATGGGAACGGCAATTGGACAGCAAGCGGGGCCTGGAGAACGAGAAG
AAAGCGAGCGTGCTCGAGCAAGCCCGTCTTGCTCTGGGCCAATTTGCGGA
CGAGCGGGAGGCCCTGCGGGAGAAGAAACAAAGCGCGAACCGGAAGGCGG
AGCAGGTGCGCATCCGAAGAGGGCGGGAGGGGGATGG back to topprotein sequence of rna9032 >rna9032-protein ID=rna9032-protein|Name=rna9032|organism=Nannochloropsis gaditana|type=polypeptide|length=114bp
MTGASVGAVAGTMSGFWNSAGIRFNREQVARQVLPTIYKNLGYLAGVGAS
YRAGEALMETWTGKEGAVVNTAFGGAVSGAFIGFRSGHPTVMVATAGACA
LGCVAIHLNGNKFA back to topmRNA from alignment at KK037251.1:159307..161806- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9032 ID=rna9032|Name=rna9032|organism=Nannochloropsis gaditana|type=mRNA|length=2500bp|location=Sequence derived from alignment at KK037251.1:159307..161806- (Nannochloropsis gaditana)
GGACGGCAACAATTCTCCGCTTGGGCATGATTCCCTGGTGTATAGAGGCC
GGACGGTGGAAATACTGTAGGTTGGCGGGAAAGGAGGCATTGGGGAGGAT
TGGCGGGTTTTGTACGCAAGCATGTGACGGAGGAGACTCGGGCACACGCT
CCGACTCGGACATGCGGGCATTCCAACTGTCCTATCCGACGACCGCCGCA
ATTCATAAGTACATGGACACGGCCACACCAACAACACGCCGTCACGCCCG
CCCTTTTTTCGACGCACTGCGTGGTGCACGCCCCATCGGCCGTGCCAGCA
AGGCAACAGGTCCTGACTATCCACGTAGCCGTGTTCGGAGTAACAGAGGA
TCGATCATCGCCGGCTCAACGAGAAGAGGGCAAGTGGGCGAGAAAATAAA
TCCAGCAAAAACACCAAAAGATGCTTTTCACCCCCACCTGGATCCCGCCG
GACGCCGACGGCCTCGTGCATCGAGGAGATATGAGTGCATGGAGGGGAAG
AATTAGGCGTCAGCGTGGGAGTATGCGGGTTCGGGGGCGGGGATGGTGCT
ATTGGTGGGTAGTGAGTTACTACGAGCCTGAAGCCGGACGGTGTGTTTTT
GGTAACAAAAATAGCGTAAACCTTGGTCACAAGGTACTGAAGGCCGCAGC
AAACATCCGCGTTCATCACAATTGTAACGATTTCTAGGCTGTTTGCGAGT
GTGAGGCTCGGCTTTCGATGTGCTTGAGTTGCGGAGGGTGACGGGGCTAA
GAAGAGCGCAATGGGGTGAGGGTAGATTGCAATACCCGATGCTGCTGACA
CGCGACTTCAACTGGCTTTCACGGCCCGACTGACATTTTCACCTCTCTAA
ACCCTTCTCTATTGGATAGGACGCCCTGCGACATCGACAATGGGTAGCGA
CGACGGTTTCTTTAGTCGTACCTTGGAAGTAAGTGGTCCCTGCCCTGAGC
TTTCCGAGGCCCCCGCGTCCCAAGTGCTGTCTCTGTCTTCTTTTGCGAGG
CGTGCTTTGCGATCACGCCCTGAGATAGATACGCATGACGGTCGTGGGAA
CGTCTCCCGCTCGTTCTTTTCTTTGTATGTAATGTCTTCATCTATCACAT
TCGGCGCCTAGGTTGTTTCTCCTTACTACTTGCTCCCTCCCCTAATCACA
CCACGTGCGCTCGTCCCCCCCTTTCCACCCTGGACTCTTCCCTTTCCTTC
TTTTTTGTCCCAGGGCGCCATGACGGGGGCCAGCGTTGGCGCGGTGGCCG
GCACCATGAGCGGTTTCTGGAACTCCGCGGGAATCCGTTTTAACAGGGAG
CAGGTGGCCCGCCAAGTCTTACCCACCATCTATAAAAACCTCGGATATCT
AGCAGGGGTCGGCGCCAGCTACAGGGCGGGAGAGGCCTTGATGGAGACAT
GGACAGGGAAGGAAGGGGCGGTGGTAAACACGGCTTTTGGCGGGGCGGTG
AGTCCCAGAGGGAAGGAGGGGGGGGAGGGCGGGAGTGGGACGGTGCGGAG
GTGGAAAGGGAGGAGGGCCCGGGGGGAATCATAGGGGGGGGGCGGTCGCA
TATACTCCAGCTGGGTCATGCCGGCGGCTTTTCCATGCTCTTTTTCCAGG
ACGTGACATGGCGGCAGGTTTAGTGATGATGATTCACTTTTTTGGGGGGT
AGAGATGCGGGAGGGATGGGAGTGCTCTCGGGGCTGTGACGGCCCCGCCC
GCCGCATGACTCGGGTCCCGAGGCTGAAACCCAAAAGGTCATATCCGTAG
GCATCTTTAACGCTTTGATCCCCCCTTCCTTATCCTGGCGTTCGTATCGT
TTAGGTGAGCGGCGCTTTCATAGGCTTTCGATCGGGGCATCCCACCGTGA
TGGTGGCCACGGCGGGCGCGTGCGCCTTGGGTTGTGTGGCAATCCATTTG
AATGGGAACAAGTTCGCGTAGGGGGGAAAGGAAAGGGCGGGAGCGATGGA
ACGGGTGGGGGTTGCACGGGAACCGGGGAAGGTAGATAGGGGCGACTCGG
AAAGGATAGAGGGCTCGCCGAGGGAGGAAGTATTGTAAGGCTTCTTCATC
AAGGCATGAGAGAGGCCAATGGAACGGCCAAGAGGAAGCGTCGCAATGAG
GACCCGGACGCCAGTTTCGTTCGTGCGATTGTGTGAGCAGGAGATGCGGG
ATCTATATTGAATAATGTCAGCCGTGGGCTGGGGTGGAATTTGAGTGGCA
CTGGCCATTACCTGAGAGAACGAAAGAACGAGAAAAACACTGAAAGCCAT
GTCATACAGGAGTGAGCGTTTCAAAATGCTCTGGATCGCGGAGTTTGCCT
GTCAAATCAAGTCGTTTGCGAGGAGACGGGCGATGGGAGCGACTAGATAA
TGTTAGCACTGTCATGGTCCGTCCCGACGCCTTTTTATTTTTGGGATTCT
TTTCCCCAAGGATTTCTTTGCGCACGTTCGAATAGCTTGTCGCATATATT
CCCAAAGAGTTTACACCAGCTGCACTCTTGCGGTAAAACGCTGTTGTTCA
back to topCoding sequence (CDS) from alignment at KK037251.1:159307..161806- >rna9032 ID=rna9032|Name=rna9032|organism=Nannochloropsis gaditana|type=CDS|length=690bp|location=Sequence derived from alignment at KK037251.1:159307..161806- (Nannochloropsis gaditana)
GTGAGCGGCGCTTTCATAGGCTTTCGATCGGGGCATCCCACCGTGATGGT
GGCCACGGCGGGCGCGTGCGCCTTGGGTTGTGTGGCAATCCATTTGAATG
GGAACAAGTTCGCGTAGATGACGGGGGCCAGCGTTGGCGCGGTGGCCGGC
ACCATGAGCGGTTTCTGGAACTCCGCGGGAATCCGTTTTAACAGGGAGCA
GGTGGCCCGCCAAGTCTTACCCACCATCTATAAAAACCTCGGATATCTAG
CAGGGGTCGGCGCCAGCTACAGGGCGGGAGAGGCCTTGATGGAGACATGG
ACAGGGAAGGAAGGGGCGGTGGTAAACACGGCTTTTGGCGGGGCGGTGAG
CGGCGCTTTCATAGGCTTTCGATCGGGGCATCCCACCGTGATGGTGGCCA
CGGCGGGCGCGTGCGCCTTGGGTTGTGTGGCAATCCATTTGAATGGGAAC
AAGTTCGCGTAGATGACGGGGGCCAGCGTTGGCGCGGTGGCCGGCACCAT
GAGCGGTTTCTGGAACTCCGCGGGAATCCGTTTTAACAGGGAGCAGGTGG
CCCGCCAAGTCTTACCCACCATCTATAAAAACCTCGGATATCTAGCAGGG
GTCGGCGCCAGCTACAGGGCGGGAGAGGCCTTGATGGAGACATGGACAGG
GAAGGAAGGGGCGGTGGTAAACACGGCTTTTGGCGGGGCG back to top
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