rna9031, rna9031 (mRNA) Nannochloropsis gaditana

Overview
Namerna9031
Unique Namerna9031
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length537
Alignment locationKK037251.1:157721..159009 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100863g3.3401.mrna
Orig protein idgnl|cribi|Naga_100863g3.3401
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:157721..159009 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100863g3gene8758Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9031rna9031-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21669.1cds9001Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9031 ID=rna9031|Name=rna9031|organism=Nannochloropsis gaditana|type=mRNA|length=537bp
ATGTCTCACCGTAAGTTTCGTGCCCCTCGTCACGGCTCCCTCGGCTTCCT
GCCCAAGAAGCGGACCAAGAAGCACCGCGGGAAAATCCGCTCTTTTCCCA
AAGATGACCCTGCCAAGCCCCCTCATCTGACGGCTTTCATGGCGTACAAG
GCCGGGATGACTCACGTGGTCCGGGAGGTTGACCGGTCGGGTTCGAAAAT
GCACAAGAAAGAGGTCGTAGAAGCCGTGACCATTTTGGAAGCGCCTCCCA
TGAAGGTGGTGGGTGTGGTCGGCTATGTGGCCACCCCCACGGGCCTTCGG
ACCCTGACGACCGTTTGGGCGGAGCATCTCTCCGACGAGATCCGTCGCCG
CTTCTACAAGAATTGGTACAAGTCTAAGAAGAAGGCCTTCACCAAGTACG
CCAAGAAGTGGAGCGAGGCCCCTGGCAAGGTGGAGGAAGAGCTCCAGCGC
ATTAAGGACTACGCGGACGTGGTTCGAGTCCTTGCCCACACCCAGATTAA
GAAGTGGACTTTGCCAAGTCCCTCCTCGAGAAGGTAG
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protein sequence of rna9031

>rna9031-protein ID=rna9031-protein|Name=rna9031|organism=Nannochloropsis gaditana|type=polypeptide|length=249bp
MAARRRQCTGYVQSDGHMNLAMRWTTKQNLVSHVGICVVSYVTIVPLEAG
GAKRAPGCCWHQDSHACSVCRALAKHNEGSHFLAYILLIIMGALYADHRC
LDGRARDQVSPSSAPFILANINPMSPPALESRSPRLANIFSTSLTQPSPF
SHSCPPSPRGRGPYVLRRVGGDAHGAAVLFGVGCLLGGMGTAIGQQAGPG
EREESERARASPSCSGPICGRAGGPAGEETKREPEGGAGAHPKRAGGGW
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mRNA from alignment at KK037251.1:157721..159009-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9031 ID=rna9031|Name=rna9031|organism=Nannochloropsis gaditana|type=mRNA|length=1289bp|location=Sequence derived from alignment at KK037251.1:157721..159009- (Nannochloropsis gaditana)
CGAGTCTGCCCATCAATCACGGAGATCTCACGAACATCCAACGGCCACGG
GCATGTGACTGTCTCAAAGAGTCGAAAACAGGGGCTTGAAGGAGACCATG
AGTGACTACGACTACAACGACGAGACAAGTGCCAGCCAAAATGGCGGCGC
GCCGGAGACAATGTACAGGGTACGTGCAAAGCGACGGGCATATGAACCTT
GCGATGCGCTGGACAACGAAGCAAAACTTAGTCAGTCATGTTGGTATTTG
CGTTGTCAGTTATGTGACCATCGTCCCTTTGGAGGCCGGCGGGGCTAAAC
GGGCACCAGGTTGCTGCTGGCACCAGGACAGCCATGCGTGCTCTGTTTGC
CGTGCCCTCGCAAAGCACAATGAAGGTTCTCATTTTCTCGCATACATTCT
TCTCATAATCATGGGCGCTTTGTACGCTGACCATCGCTGTCTGGACGGCA
GAGCACGGGATCAGGTAAGTCCCTCCTCTGCCCCCTTCATACTTGCAAAC
ATTAACCCCATGTCACCCCCTGCCCTCGAGAGCCGCAGTCCTAGACTCGC
CAACATATTTTCCACATCACTGACACAACCTTCGCCCTTTTCTCATTCCT
GTCCACCCAGCCCCCGGGGAAGGGGGCCCTACGTCCTACGCAGAGTTGGA
GGAGATGCCCACGGAGCTGCCGTCCTCTTCGGCGTTGGAGTGAGTGAGGG
GGGGTGGGAGCAGGGGGCAAACATGCGTGTCATGGCTGTGGCTGGCCCAA
AGACATATCGGCCGACATCGGGAGTGCCGTGGAGGTGTCGACTCTTCCCG
TGGGGGATCCTGGGCCTAGCGTCCTTCTCGGGGGGACGAGGGAGGCATGC
CTTCCTGTTCCCGGCCTCCCTCGTCTCGTGGTTGGTGCCCTGCGGGGACT
GACCATGGCCTTCTTTCTTGATTCCCCCGGACGTCGTCCGACGTCCTCTG
TCTCGCGTTCGGTGCCCTGCAGAGACCCTCTTCCCCTTCCCTCCCTCGCT
CCTTTTTCTGGCCTGCTCGCTTCCCTTGGAACCCCCCGCCTGGAACCAAC
CCCTTTTCCCCCATCCCCCTCTTCCCTTTCTCTCTCCCCAGTGCCTTCTT
GGAGGAATGGGAACGGCAATTGGACAGCAAGCGGGGCCTGGAGAACGAGA
AGAAAGCGAGCGTGCTCGAGCAAGCCCGTCTTGCTCTGGGCCAATTTGCG
GACGAGCGGGAGGCCCTGCGGGAGAAGAAACAAAGCGCGAACCGGAAGGC
GGAGCAGGTGCGCATCCGAAGAGGGCGGGAGGGGGATGG
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Coding sequence (CDS) from alignment at KK037251.1:157721..159009-

>rna9031 ID=rna9031|Name=rna9031|organism=Nannochloropsis gaditana|type=CDS|length=1494bp|location=Sequence derived from alignment at KK037251.1:157721..159009- (Nannochloropsis gaditana)
TGCCTTCTTGGAGGAATGGGAACGGCAATTGGACAGCAAGCGGGGCCTGG
AGAACGAGAAGAAAGCGAGCGTGCTCGAGCAAGCCCGTCTTGCTCTGGGC
CAATTTGCGGACGAGCGGGAGGCCCTGCGGGAGAAGAAACAAAGCGCGAA
CCGGAAGGCGGAGCAGGTGCGCATCCGAAGAGGGCGGGAGGGGGATGGAT
GGCGGCGCGCCGGAGACAATGTACAGGGTACGTGCAAAGCGACGGGCATA
TGAACCTTGCGATGCGCTGGACAACGAAGCAAAACTTAGTCAGTCATGTT
GGTATTTGCGTTGTCAGTTATGTGACCATCGTCCCTTTGGAGGCCGGCGG
GGCTAAACGGGCACCAGGTTGCTGCTGGCACCAGGACAGCCATGCGTGCT
CTGTTTGCCGTGCCCTCGCAAAGCACAATGAAGGTTCTCATTTTCTCGCA
TACATTCTTCTCATAATCATGGGCGCTTTGTACGCTGACCATCGCTGTCT
GGACGGCAGAGCACGGGATCAGGTAAGTCCCTCCTCTGCCCCCTTCATAC
TTGCAAACATTAACCCCATGTCACCCCCTGCCCTCGAGAGCCGCAGTCCT
AGACTCGCCAACATATTTTCCACATCACTGACACAACCTTCGCCCTTTTC
TCATTCCTGTCCACCCAGCCCCCGGGGAAGGGGGCCCTACGTCCTACGCA
GAGTTGGAGGAGATGCCCACGGAGCTGCCGTCCTCTTCGGCGTTGGATGC
CTTCTTGGAGGAATGGGAACGGCAATTGGACAGCAAGCGGGGCCTGGAGA
ACGAGAAGAAAGCGAGCGTGCTCGAGCAAGCCCGTCTTGCTCTGGGCCAA
TTTGCGGACGAGCGGGAGGCCCTGCGGGAGAAGAAACAAAGCGCGAACCG
GAAGGCGGAGCAGGTGCGCATCCGAAGAGGGCGGGAGGGGGATGGATGGC
GGCGCGCCGGAGACAATGTACAGGGTACGTGCAAAGCGACGGGCATATGA
ACCTTGCGATGCGCTGGACAACGAAGCAAAACTTAGTCAGTCATGTTGGT
ATTTGCGTTGTCAGTTATGTGACCATCGTCCCTTTGGAGGCCGGCGGGGC
TAAACGGGCACCAGGTTGCTGCTGGCACCAGGACAGCCATGCGTGCTCTG
TTTGCCGTGCCCTCGCAAAGCACAATGAAGGTTCTCATTTTCTCGCATAC
ATTCTTCTCATAATCATGGGCGCTTTGTACGCTGACCATCGCTGTCTGGA
CGGCAGAGCACGGGATCAGGTAAGTCCCTCCTCTGCCCCCTTCATACTTG
CAAACATTAACCCCATGTCACCCCCTGCCCTCGAGAGCCGCAGTCCTAGA
CTCGCCAACATATTTTCCACATCACTGACACAACCTTCGCCCTTTTCTCA
TTCCTGTCCACCCAGCCCCCGGGGAAGGGGGCCCTACGTCCTACGCAGAG
TTGGAGGAGATGCCCACGGAGCTGCCGTCCTCTTCGGCGTTGGA
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Synonyms
Publications