|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100667g3.8079.mrna |
| Orig protein id | gnl|cribi|Naga_100667g3.8079 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:149819..151366 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9028 ID=rna9028|Name=rna9028|organism=Nannochloropsis gaditana|type=mRNA|length=782bp
TAATGGACGGGAGGGGAGGGCGAGGAAGGGACAGAGAGAGAGCGTGCGTG
CGCGAACGAGATGGTCTTGATGTTCAGGCTGCTCGCGTGTAAATCTGAGC
ACGCCAAGGCGGGAAAGTGGGATGGGGAGACGGCAGGCCACATCATTTTT
GCGGCGCAAGGGTGTTTCTCGTGCCACACTTGCGGGGGCCCTGTAAAGGG
CGGACGGGGTTGGGGGCGTGAGATCCTCCGATTCTGGGAGCCACTTAGAT
GGGGCAGGGCGTGGGGCGGGTTAGGCGGAAAGAATGATATCAGGGAGGGA
GAGACGTCACAGGAGAATTTTTCCGGAGGTACGGGAATATGCACCCATGC
TTTCTTGAGGGGGGACGAGGCGGTGCGTGCACGCAACAAAGCTTTGGTTT
TGTGTGAGAAAGGGTCATCATCATTTGGAGAGCACACGTGGACCTTTTTT
GTGGACCGAATGTGAGCATGGAAACGAATACAGGAAACGGGAAGGGCCGA
TGAAATTGTCTCGTGGACGGGGAGAAGCCCACGATTACTGCACGAATCAA
TCGACTGTGGCCTGAAGAACATGTCTCCTGCAAAATCTTTGCAAAGCATA
CCCGGATGTATGTCGCCAGCCGTGAAGGCTGGAGGGTTTGGGGAAGGAAG
GGGTTGGGACCTGAGAGGAAGGAAAGTGAGAGGACAAGGGGGGATTCTGT
CCAAGGCTGATTGAATACTACTAACTGAATGCCCCGTGACGCGCGCACGA
AAAAGCAAATTCCATGAAGTGGAGGGAAGAAC back to topprotein sequence of rna9028 >rna9028-protein ID=rna9028-protein|Name=rna9028|organism=Nannochloropsis gaditana|type=polypeptide|length=438bp
MTLVTALELLSSDPQSAARGHPTRPSEPVEHATSPRKNDQAGSLTTPQHS
NGSHVTPHLTTNTSKFPSSQVSGGRDAQVGSSNNICRNPFDRISASAVSA
ASSSFSSTTSSNASFASAQATLREDDINDLAIRLSDKFDGREMKNTRQHF
ASDRLPVTRVLTFTKPQALRRHQGGTEEEVKGAKEGEACHVQRPRHTAGS
GEKEEARVWRDFGRADDARPAVEKAPEGTSPSSDPTEHPMGSLRGHTTGN
STTSSSSSSSSGRGGVDSGLTEPFRDREETRHTQASSTQELQQEQDEAWA
VDILPVASGPTTGADVMEEVPAASAAALEAATPSVVNLFSGPASAFPFAA
DKSELCSSTTVTLMTSSAEAEPEGGKEGEGEVGSMGSMGNASRDGRCHEP
SLASFKSREFSGSNMARSVRRRAVLRVGAGVALVAVGA back to topmRNA from alignment at KK037251.1:149819..151366- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna9028 ID=rna9028|Name=rna9028|organism=Nannochloropsis gaditana|type=mRNA|length=1548bp|location=Sequence derived from alignment at KK037251.1:149819..151366- (Nannochloropsis gaditana)
CACTGGGTCGCTTCGATGCGTACTTCTATTGTATGCCTGGCGTTGTATGT
TCACTCGATGATAAGAATTTGGTCTCACTGGGCACTGGTGAAATTTTCCT
GTGGGAGTAGCGCTGTGTTCGGAACGGGAAGAATCGGAGAAAAGACGTTG
TGCCAATTGATCAAGAAATCCTTGTCCCAAATCTCATCATTCCATCCCAC
CACATTCCAACTTATCGGCATCTTTCTAGTCACACATGACGCTTGTCACG
GCATTGGAATTACTGTCCTCGGACCCGCAGTCTGCAGCACGGGGGCACCC
CACACGGCCGTCCGAGCCAGTGGAACATGCGACAAGCCCGCGCAAAAATG
ACCAAGCCGGATCTCTCACCACGCCACAGCATAGCAACGGGAGTCATGTT
ACGCCTCACTTGACGACCAACACCTCGAAATTCCCGTCATCCCAAGTGTC
TGGGGGGCGCGATGCGCAGGTTGGGTCTTCTAATAACATATGTCGGAATC
CCTTCGATAGGATATCGGCGTCAGCCGTTTCCGCCGCCTCGTCCTCTTTT
TCTTCCACAACCTCCTCCAATGCATCTTTTGCCTCGGCGCAGGCAACTTT
GCGAGAGGACGATATAAATGATTTGGCAATACGGCTCTCTGATAAATTTG
ATGGAAGGGAGATGAAGAATACGAGACAACATTTCGCATCCGATCGGCTC
CCCGTCACAAGGGTTCTGACCTTTACCAAGCCGCAGGCCCTGCGCCGACA
TCAGGGAGGAACGGAGGAGGAAGTGAAGGGAGCGAAAGAAGGGGAAGCAT
GTCATGTGCAGCGGCCACGGCACACTGCAGGGTCAGGGGAAAAGGAAGAA
GCCAGAGTCTGGAGGGATTTCGGAAGGGCGGATGACGCGAGGCCGGCGGT
GGAAAAAGCGCCGGAAGGCACTTCCCCGAGCTCCGATCCCACAGAGCATC
CCATGGGATCATTGAGAGGCCACACGACCGGCAACAGCACCACCAGCAGC
AGCAGCAGCAGCAGCAGCGGGAGGGGAGGAGTAGATTCCGGCTTGACCGA
GCCGTTTCGGGACAGGGAAGAGACAAGGCATACCCAGGCATCCTCAACGC
AAGAACTGCAGCAGGAACAGGACGAGGCATGGGCCGTGGACATCCTCCCG
GTCGCCTCGGGTCCGACGACGGGGGCCGATGTGATGGAAGAGGTACCCGC
CGCGTCGGCGGCGGCGTTGGAAGCCGCCACTCCGAGCGTCGTCAATCTTT
TTTCCGGCCCTGCCTCCGCCTTTCCCTTTGCTGCGGATAAATCGGAGCTG
TGCTCATCGACCACTGTCACCTTGATGACTAGTAGCGCGGAAGCCGAGCC
GGAGGGCGGGAAGGAGGGCGAGGGGGAGGTAGGGAGCATGGGCAGCATGG
GGAACGCGAGCAGGGACGGGCGGTGCCACGAGCCGTCCCTCGCCTCGTTC
AAGAGCCGAGAGTTCAGTGGCTCCAATATGGCGCGAAGCGTGAGGCGGAG
GGCGGTGCTGCGGGTAGGGGCCGGTGTGGCCCTGGTGGCAGTGGGCGC back to topCoding sequence (CDS) from alignment at KK037251.1:149819..151366- >rna9028 ID=rna9028|Name=rna9028|organism=Nannochloropsis gaditana|type=CDS|length=1313bp|location=Sequence derived from alignment at KK037251.1:149819..151366- (Nannochloropsis gaditana)
ATGACGCTTGTCACGGCATTGGAATTACTGTCCTCGGACCCGCAGTCTGC
AGCACGGGGGCACCCCACACGGCCGTCCGAGCCAGTGGAACATGCGACAA
GCCCGCGCAAAAATGACCAAGCCGGATCTCTCACCACGCCACAGCATAGC
AACGGGAGTCATGTTACGCCTCACTTGACGACCAACACCTCGAAATTCCC
GTCATCCCAAGTGTCTGGGGGGCGCGATGCGCAGGTTGGGTCTTCTAATA
ACATATGTCGGAATCCCTTCGATAGGATATCGGCGTCAGCCGTTTCCGCC
GCCTCGTCCTCTTTTTCTTCCACAACCTCCTCCAATGCATCTTTTGCCTC
GGCGCAGGCAACTTTGCGAGAGGACGATATAAATGATTTGGCAATACGGC
TCTCTGATAAATTTGATGGAAGGGAGATGAAGAATACGAGACAACATTTC
GCATCCGATCGGCTCCCCGTCACAAGGGTTCTGACCTTTACCAAGCCGCA
GGCCCTGCGCCGACATCAGGGAGGAACGGAGGAGGAAGTGAAGGGAGCGA
AAGAAGGGGAAGCATGTCATGTGCAGCGGCCACGGCACACTGCAGGGTCA
GGGGAAAAGGAAGAAGCCAGAGTCTGGAGGGATTTCGGAAGGGCGGATGA
CGCGAGGCCGGCGGTGGAAAAAGCGCCGGAAGGCACTTCCCCGAGCTCCG
ATCCCACAGAGCATCCCATGGGATCATTGAGAGGCCACACGACCGGCAAC
AGCACCACCAGCAGCAGCAGCAGCAGCAGCAGCGGGAGGGGAGGAGTAGA
TTCCGGCTTGACCGAGCCGTTTCGGGACAGGGAAGAGACAAGGCATACCC
AGGCATCCTCAACGCAAGAACTGCAGCAGGAACAGGACGAGGCATGGGCC
GTGGACATCCTCCCGGTCGCCTCGGGTCCGACGACGGGGGCCGATGTGAT
GGAAGAGGTACCCGCCGCGTCGGCGGCGGCGTTGGAAGCCGCCACTCCGA
GCGTCGTCAATCTTTTTTCCGGCCCTGCCTCCGCCTTTCCCTTTGCTGCG
GATAAATCGGAGCTGTGCTCATCGACCACTGTCACCTTGATGACTAGTAG
CGCGGAAGCCGAGCCGGAGGGCGGGAAGGAGGGCGAGGGGGAGGTAGGGA
GCATGGGCAGCATGGGGAACGCGAGCAGGGACGGGCGGTGCCACGAGCCG
TCCCTCGCCTCGTTCAAGAGCCGAGAGTTCAGTGGCTCCAATATGGCGCG
AAGCGTGAGGCGGAGGGCGGTGCTGCGGGTAGGGGCCGGTGTGGCCCTGG
TGGCAGTGGGCGC back to top
|