rna9027, rna9027 (mRNA) Nannochloropsis gaditana

Overview
Namerna9027
Unique Namerna9027
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length628
Alignment locationKK037251.1:148906..149687 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102122g1.8317.mrna
Orig protein idgnl|cribi|Naga_102122g1.8317
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:148906..149687 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102122g1gene8754Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21676.1cds8997Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9027rna9027-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9027 ID=rna9027|Name=rna9027|organism=Nannochloropsis gaditana|type=mRNA|length=628bp
CCCCCGCCTCTGGGGCTTGGACTGCGAGATGTGCCTGACCGAGGCGGGAC
TCGAACTCACGCGGCTCACGCTGGTGGATGAAATGGGCCGCGTCATCCTG
GACGAGCTCGTGCGTCCTTCCACGCCCATCATCGATTATTTGACCGCCTA
CAGCGGCATCACCCCCGCCTCCCTCGCGTCAGTCACCACCACCCTCCCTT
CCCTCCAGCCCACCCTCCTGGCCCTCCTCGCCGAAGCCCCTACCTACCTG
GTCGGCCACGGCCTGGAAGGCGACCTCCGCGCCCTCCGGATCCATCACCC
GTACCTGATCGACACCGCCGTCCTCTACCCCCACCCAAAGGGGGCGCCGT
ACAAGCGCTCGCTGAAGGATTTGGCGAAGGATCTCCTGGACGGGCGGGAG
GTGCAAGCGGGCCACGGTAGCAGCGGGCACGATTCCTACCAGGACGCAGT
GACGGCGCTGGAGCTGGCTTTGTTGAAGATGACCCAAGCGCCGGGGTTCG
CGATCCCGGAGGCGTGGGCGGAGGGCGGGAGGGAGGGCGGGAGGGAGGGC
GGGGAGGAGCCCTTGTTTGGTTGCATGCGAGGGGCTACCGAAGGGAAGGG
ACGCAGTGTGGGTGGCGCAGGAGATTAA
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protein sequence of rna9027

>rna9027-protein ID=rna9027-protein|Name=rna9027|organism=Nannochloropsis gaditana|type=polypeptide|length=134bp
MVLMFRLLACKSEHAKAGKWDGETAGHIIFAAQGCFSCHTCGGPVKGGRG
WGREILRFWEPLRWGRAWGGLGGKNDIREGETSQENFSGGTGICTHAFLR
GDEAVRARNKALVLCEKGSSSFGEHTWTFFVDRM
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mRNA from alignment at KK037251.1:148906..149687-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9027 ID=rna9027|Name=rna9027|organism=Nannochloropsis gaditana|type=mRNA|length=782bp|location=Sequence derived from alignment at KK037251.1:148906..149687- (Nannochloropsis gaditana)
TAATGGACGGGAGGGGAGGGCGAGGAAGGGACAGAGAGAGAGCGTGCGTG
CGCGAACGAGATGGTCTTGATGTTCAGGCTGCTCGCGTGTAAATCTGAGC
ACGCCAAGGCGGGAAAGTGGGATGGGGAGACGGCAGGCCACATCATTTTT
GCGGCGCAAGGGTGTTTCTCGTGCCACACTTGCGGGGGCCCTGTAAAGGG
CGGACGGGGTTGGGGGCGTGAGATCCTCCGATTCTGGGAGCCACTTAGAT
GGGGCAGGGCGTGGGGCGGGTTAGGCGGAAAGAATGATATCAGGGAGGGA
GAGACGTCACAGGAGAATTTTTCCGGAGGTACGGGAATATGCACCCATGC
TTTCTTGAGGGGGGACGAGGCGGTGCGTGCACGCAACAAAGCTTTGGTTT
TGTGTGAGAAAGGGTCATCATCATTTGGAGAGCACACGTGGACCTTTTTT
GTGGACCGAATGTGAGCATGGAAACGAATACAGGAAACGGGAAGGGCCGA
TGAAATTGTCTCGTGGACGGGGAGAAGCCCACGATTACTGCACGAATCAA
TCGACTGTGGCCTGAAGAACATGTCTCCTGCAAAATCTTTGCAAAGCATA
CCCGGATGTATGTCGCCAGCCGTGAAGGCTGGAGGGTTTGGGGAAGGAAG
GGGTTGGGACCTGAGAGGAAGGAAAGTGAGAGGACAAGGGGGGATTCTGT
CCAAGGCTGATTGAATACTACTAACTGAATGCCCCGTGACGCGCGCACGA
AAAAGCAAATTCCATGAAGTGGAGGGAAGAAC
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Coding sequence (CDS) from alignment at KK037251.1:148906..149687-

>rna9027 ID=rna9027|Name=rna9027|organism=Nannochloropsis gaditana|type=CDS|length=405bp|location=Sequence derived from alignment at KK037251.1:148906..149687- (Nannochloropsis gaditana)
ATGGTCTTGATGTTCAGGCTGCTCGCGTGTAAATCTGAGCACGCCAAGGC
GGGAAAGTGGGATGGGGAGACGGCAGGCCACATCATTTTTGCGGCGCAAG
GGTGTTTCTCGTGCCACACTTGCGGGGGCCCTGTAAAGGGCGGACGGGGT
TGGGGGCGTGAGATCCTCCGATTCTGGGAGCCACTTAGATGGGGCAGGGC
GTGGGGCGGGTTAGGCGGAAAGAATGATATCAGGGAGGGAGAGACGTCAC
AGGAGAATTTTTCCGGAGGTACGGGAATATGCACCCATGCTTTCTTGAGG
GGGGACGAGGCGGTGCGTGCACGCAACAAAGCTTTGGTTTTGTGTGAGAA
AGGGTCATCATCATTTGGAGAGCACACGTGGACCTTTTTTGTGGACCGAA
TGTGA
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Synonyms
Publications