rna9022, rna9022 (mRNA) Nannochloropsis gaditana

Overview
Namerna9022
Unique Namerna9022
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length3000
Alignment locationKK037251.1:127384..127917 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101018g1.926.mrna
Orig protein idgnl|cribi|Naga_101018g1.926
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:127384..127917 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101018g1gene8748Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21681.1cds8992Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9022rna9022-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9022 ID=rna9022|Name=rna9022|organism=Nannochloropsis gaditana|type=mRNA|length=3000bp
CCTTCCTTCCTCGCAGGGACCTCCGCCCCGAGTTCTCCCGCGGCTCGGTG
GACTGGGTCGTGGGCGGTGACTACTGCGTGCGCCCTCCCCAGCTTCCCCT
CTACGTCTTCTGCCTGGACGTGTCCGAAACGGCCGTGGAGGCCGGCCTGC
CCCTGATCGCCCTGGAAGGCTTGCGCGACGCGATCAAAGCCAACCTTCTC
CCCGGCGGAGAAAAGGCTCGGGTGGGCCTCGTCACGTTTGCCAATCGGGT
GCAATTTTACGGCGTCGGTGCCGGGTGGGAGGGAGGGAAAGTTGGGGAAG
GGGGTTCCCCGCCCTCGGTCCACGTCATGGGCGATGTGGACGACCCCTTC
TCCGCCCTCCCGCCCGACCAATGGATCGTGGCGGACAAGCCGAAGTTCTT
GGCGCTGCTGGATCACATTCCTGCCTTGACCTTCGGTGCGGGCATGGCGG
GGCCGGACGCGGCGGGGGGAGGGTCGGGGGGAATGTCCGGGTATCCAGGG
CGGGAGCGGGAGGAGTCGGCGAGTGCGGCGGCCGTGGAGGCGGTGGGAGA
TGCGTTGGCCACATTGGGCGGACGGGTCTTCCTCTTCACGGCGTCGAGGT
AGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGCCGGGCCAGGACCCC
ACCTTTCCCCGTTCTCTTCTTGTCTCAGACTTATGCTGCTGCCTCTTCCC
GTCCTCGTCCTCATTTTTTTTCTCCTTTCGACCCCGCCATCTTTTTTCCC
TCCCGGGGGCGCCTGGTCTTTCCCCTAGGCCGACGCGCGGGGCGGGTGCT
CTTCGTCTTAGGGCAGATCCCAGAGACTACGGCTCCGAGAGGGAGAACGC
ACTCTATTGCCCGGTTGGGGGATGCATTGCCGGAAAATCCTCCGTAAGCA
GCGGGACGGGCCCGGCTGCGGTGGCGAAGTCGAAGGACGATAAGGCCCTT
GGGGACTATTACCAGCGACTGGGCTCGGTCTTGGCCGGTCGGCAGGTTTG
CCTCGACATTTTCATCTGCCACCCCGCCCCTCCCTCGGTCCCGTCCTCCA
CCGGTCCCTCCCCCGGTCCTTCCTCCTCCGCCTTTACCAATTTCTTGGAT
TTGGGCACCCTGGGGACACTCACGCACATGACGGCCGGACGCCTCCATTA
CTTCCCCGGGCCCGTTGCGTCCCCAACCTCCCCCGCGGCCGCCGCCTCCC
TCCCGTCCTCCCTCACGCCCACCTTCCTCACGGCCCTCCGGAACGCCCTC
GCCTCCCCCCTCGCCCAGGAAGCCGTGATGAAGATCCGTTCCTCCGTCGG
CCTCAGCCTCAAGCACTACGTGGCTCCGGGTATCATCCACCCGTCCGAAG
AACTCGAACTGGCCGCCCTGGACCCGTCCCAATCCTTCGTCGCTGAATTC
CTCCACGACGGGGAGAAGATCAAGGAGGGCAGCCGTGTCTACCTCCAGCT
CGCCCTCCTGTACACCCAGGGGGGGACCGGCCAACGCATGGTCCGTGTCC
ACAATCTGCAGCTCCCGACGGCTTCGGCTGTCTCGGGCGTCTTCCGGTAT
GCGGACATGGAAGCGATCTACGCCACCCTGGTCAAGCAAGCCGTCTGGCA
GGCCTGGTCGGAGCCCTTGGTGCGAGTCCGGGAACAACTGACACGCGCCT
GCGTGGACATGCTCTACCAATACCGACAACTCTGCGCAGCGTCCTCCCCC
CCCGGCCAATTGATCCTCCCCGAATCGCTCAAGCTCCTGCCTCTGTACGC
CTTGGCCCTCCTGAAGAGCGATGCCCTGCGCGTGAACCCCCCCGAGGCTG
GGCGTGCCCACGGCCTCCCGGACCCCACGGCCGACGTCCGGGCCGCCACC
TTGCACGCATTCTTGTCGGCGCCTGCCAAGCACTTGGTGCACATGACATA
CCCTCGTCTCTACGAAGTGGTGGGTGTGGGAGGCGGGCGGGACGACACAG
CGGGCTCGATGGGCTTGCTCCGGTTGAACGGATGCTCCGCCGAGAGCTTG
ATCGACGACGGGGTCTTCCTCTTGGACGCTTGGAATCAAACTTACCTCTA
CGTGGGGCGGGACGTGGGGACGAGGGTATGGACCGGCCTCTTCAACCGGT
CGGGCCCGCCGGAGAACGCGCACGAAGCCGGGTGCACCCTAGCCTTGGCC
GTAGAGACGTCGGATATGGCGGGGAGGGTGCTGGAGCTGCTGGAGGAGTT
GTGTGACGGGGATCGGAGCGGATATGGGGTCGGGAAAGGGGCGGTTCCAG
CCATGCAGGTGGTGGTGGCCGGGTCAGGGAGCCCCTCCGAGGCCCATTTC
ATCAAAATGTTGGTGGACGATCGGCAGAAGAACGAGCAGTCCTACGTGGA
GTACCTGTGTTTGGTCCATAAACAGATCCAGAACCGGTTGGCGGGTCGGT
AGGAGGGGCACAAGGAGGAGAAGGCGGATGGTCTCAGCCATGGGGTGGCT
CCTTGGACGTGCGAATCGAGGATGGAGGAGGAGTGGGAGGAGGAAAGCAG
GGCCGAGGGCGAACGGTACTGGAACGGAAGAGGGAAATCGGTGGGGGGTA
GGGGGATAGGGGTGGCAGTAGGTGCCCGAGTCAATTTTACAAAGGGATTG
AACGCCATTACGATGGGATTGACGGAGGACGTAACGATGGCTGGTGGAGC
CAGCGCTGGTCTCTTGGGTGCATCCGACGCTTAGTAGTGGGGGGGTGGAA
GGCGCCTTCTTCCAGGACATGGAACCTATCATATAGGGAGGATGACAACT
ATCCCAATCAGTGGGGGCGAGCGACAGAAAACTTGGCGGTCAGATATTGG
GTGCGTGGACGGAGCACCGGTGTAGAAGATAGACTCAAAGGATCAAAAGC
ACTGTCCCCAGGCACGGCAACCGAAGAAAACGAGTGTATTGTGCGGTATA
CACAGCCATTTTTGGCGTCGCACGGGAGCGTGTGTCGTTGCAAAGAGCGC
GTATTTGATTGCAAGCTTTTGATCTACTGCTGGGAGTCCCTCAGACGTGC
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protein sequence of rna9022

>rna9022-protein ID=rna9022-protein|Name=rna9022|organism=Nannochloropsis gaditana|type=polypeptide|length=133bp
MTVWAWRGVLPGREIIFPSARCRLGGTGGWRHTDSGLTRFPFLLPRAPGL
PPPHGSSQPPPPWGGYPPPRDKSRGTASTPLPPFPPGPTLPPPRRHNVWT
RLRFPGQRTVPVPRAGGRAGGRAGRPRPSPTGP
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mRNA from alignment at KK037251.1:127384..127917-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9022 ID=rna9022|Name=rna9022|organism=Nannochloropsis gaditana|type=mRNA|length=534bp|location=Sequence derived from alignment at KK037251.1:127384..127917- (Nannochloropsis gaditana)
ATGACAGTCTGGGCGTGGCGCGGGGTTCTCCCGGGGAGAGAAATCATTTT
CCCTTCCGCTCGTTGTCGGTTGGGTGGTACCGGAGGCTGGAGGCACACTG
ACTCGGGACTGACGCGTTTCCCCTTCTTGTTGCCCCGCGCTCCAGGCCTG
CCTCCTCCGCACGGATCCTCCCAACCTCCTCCACCCTGGGGCGGATACCC
CCCCCCCCGGGACAAGAGCAGGGGAACCGCCTCGACGCCCCTCCCTCCCT
TCCCCCCGGGCCCTACCCTTCCCCCTCCACGCCGGCACAACGTGTGGACC
CGGCTCAGATTCCCCGGCCAGCGGACGGTCCCGGTTCCGAGGGCGGGGGG
GAGGGCGGGAGGGAGGGCGGGCCGCCCACGCCCCTCACCTACCGGACCTT
GAGCAACGGGGAGAAAGCACCCCCGGCGTCTACCCGTTCCTTCCTTGCGC
TGGACGACGGGAACTGTTCCCCTCGGTTCATGCGCGCGACCACCTACTAC
GTGCCCTTAACGGCCGAGGTGGCGGCTCAAACCA
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Coding sequence (CDS) from alignment at KK037251.1:127384..127917-

>rna9022 ID=rna9022|Name=rna9022|organism=Nannochloropsis gaditana|type=CDS|length=402bp|location=Sequence derived from alignment at KK037251.1:127384..127917- (Nannochloropsis gaditana)
ATGACAGTCTGGGCGTGGCGCGGGGTTCTCCCGGGGAGAGAAATCATTTT
CCCTTCCGCTCGTTGTCGGTTGGGTGGTACCGGAGGCTGGAGGCACACTG
ACTCGGGACTGACGCGTTTCCCCTTCTTGTTGCCCCGCGCTCCAGGCCTG
CCTCCTCCGCACGGATCCTCCCAACCTCCTCCACCCTGGGGCGGATACCC
CCCCCCCCGGGACAAGAGCAGGGGAACCGCCTCGACGCCCCTCCCTCCCT
TCCCCCCGGGCCCTACCCTTCCCCCTCCACGCCGGCACAACGTGTGGACC
CGGCTCAGATTCCCCGGCCAGCGGACGGTCCCGGTTCCGAGGGCGGGGGG
GAGGGCGGGAGGGAGGGCGGGCCGCCCACGCCCCTCACCTACCGGACCTT
GA
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Synonyms
Publications