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Properties
| Property Name | Value |
|---|
| Product | mitochondrial substrate carrier family protein |
| Orig transcript id | gnl|cribi|Naga_100723g1.5246.mrna |
| Orig protein id | gnl|cribi|Naga_100723g1.5246 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:99000..100801 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9009 ID=rna9009|Name=rna9009|organism=Nannochloropsis gaditana|type=mRNA|length=1993bp
GGTTGAGCTTGAGGCAAGGCGTCAGCTTTCGTCCCAGGTGGCACGGCACA
GGTTTAATGATATATAACACGGAGATTCAGTCGGGGGTCAGAATGAGCGT
TTGGGCATCCCCCAGGCCCATGGCCCATGTCAGTGAAGGAGAAGATCGGA
ACGGAGCTTCGCTTGACGGCCAGACCCGCCTTGGGCATATAAGGGCACAG
GCGCGCGTGCTTCTCGTGGAAGTCAGTGGTCATTGAAATGATTTGCTGTG
TGTATGTGTGAGCGTAGGAGTATAGGGTATACGTAAATAAGAGGGTTTGT
TGGTCGAGAACAAGAGACGCCATCCTCATGTTATGCAAAACGATAATTGA
TGAGGGCAGCGACATAGAACAAATTTAACACGAAATCTGCGGCGACAGAA
CTTAACGTACGTTCACATAGACAATTGAAGTCGTAGGAGAATAAAGCGGA
TTTCCATGAAAGACTTGGAGGAATTGCCTTTGATCCCATCCAGAGATGAT
GGCGCGGCTCGACGACAGGGTAAGACGTACAAGATCACCACTGAAGACAA
GGATGCTTTCTTGACCAACGGCTACATCCGCCTACCCGGTGTGCTTACGG
AGGAGGAATGCGCGAAGCTTGAGCAGGTCTTTGATGCTTTCATGGAAGGG
AAAGTGCAGGTGCCCGGGAAGGATTTTTGTGACATGAGCCAAAGGTTCGG
CGTTCCCTTCGAAGCTTGGCGCTTGGTCAACGCCATGCTGCCCCGCGAGT
ACTATCCGTCGTTACAAGAGGACAACGTGCTGGAGGCTCGAGCACATTCC
ATCGCCCAACAGCTTTTGGGCGACGACATGGCCTTAGATTACGATCAATT
CCTGATGAAACGGCCAAGCAGGGACGGAGAAGCGAACGGCGCGGTCTTCG
CCTGGCACCAAGATCAGGCCTACTGGCCACAGCAAACGCCGGATTTCCGA
ACCGTGACCGTATCCTTGGCCCTGAACGAAGCGAGCAGGGAGAACGGGTG
CTTGCGCGTGGTGCCCGGGTCGCACAGGGAAAAGAAACTCCGAGCCCATC
GGCCTTTGCTGGCGGGGAGAGATGGTGGGTAAGGGAGGAAGGGGGGTCGG
AACACAGTGGCTGCGGATGGGGTGTGTGGTCTAGGTACGCGCAGGGAGTC
TCAAGGCTTATGGCTTATGTTGGTCACCAATACTGAACCACTATACATTA
TGACTACTGTTGACGACAAATTACTGTGCATTCTGGCTGGTATTGCACGA
CAAATACTGAAACACGCTGCACAGACGCCCACGCTCTGACGGTGGATCTA
GTGGAAGGAGACAGAGTCCTGTACCTCCCCTTGCGGACGGGCGACGTCAC
GGTCCACGACGAGCGTATCGTCCATGGTTCCGGTGAGTCACCTTGGCGTG
CACATCTTTCTCCCCTTCCACGCAAAAAAAAGGCTCCACTCATCTTATCT
CTGGTTTCATACCATCCCCCCTTTCTGCGTTTCCAATCTCGTCAAATGCT
TCAAATCTTTTAAAACATACGATGAGTGTAGACGGCAACACTTCCACGGT
CCATCCCCGAAAGACATACGTCATAGCCTTTCGCTCTCAGGCAACCATCG
CGACTGAACGTGCCATGGGCTTCACACACTCCCACAATACCGAAACAAAC
TGGGACAGTTGGATAAGTTCGTCCTCAGCATGATGAGCGGGGATTGATTT
GAAAAGATAAACACGTTTAAAGGAATGTACGCGGAGGTTGCCGTGCACTA
TAGATGCAGCGAACGACAAATTCTGAAAGGACGACCGCAATATATACAAT
AGCTTGGTCGGGAGGGAGGAGAGCGTGGAGAGAGGGTGGGTTATTTTTGC
AACGCAAAGTCAGTACCTTCGAGACGTCAGAATGCTCCATGAATGACAGA
GAAAAATAAAGCCGTTTTTTGTGAAGATCGATCAAGTCTCGACTCAAAAA
CAAAGAAAGATTTCCACGAGGCCACGAAGCGTCGGTGCACAAT back to topprotein sequence of rna9009 >rna9009-protein ID=rna9009-protein|Name=rna9009|organism=Nannochloropsis gaditana|type=polypeptide|length=360bp
MGLTCQRPPTQSICCPSSLLNTCVCDTRSNLHFRTATKRSAGTMGESSSS
GYIGTGLRDLRPLESPLKVIPYRHVLPTSPHTSHSPPPSDDAIPVVERQR
QKASPLLKALAGSMGGLVEAIALQPVDTIKTRMQILPTSYPSMIKTAQKI
ASEESVPALWKGLTPFATHLFSKYALRFGTNAAFQSILTDSETGKLSSSR
RLLAGLGAGVTEAILIVTPFDVVKVRLQAQHGMDKANLKYQGPLDAARKI
ISQEGVGALWSGVTPTIYRNGIQQATMFFLKTWIDDNVLGVRKSLTKDGQ
ETRQPQVWQSMASGFMASCPGLVMTNPLDIVKVRASGIRSSKTATQERGK
GWEAHRGACT back to topmRNA from alignment at KK037251.1:99000..100801+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9009 ID=rna9009|Name=rna9009|organism=Nannochloropsis gaditana|type=mRNA|length=1802bp|location=Sequence derived from alignment at KK037251.1:99000..100801+ (Nannochloropsis gaditana)
ACGTTTTTGCTCAGACCCCTTCCCGTGTGTGTGTTGCGTAGCTTGCGCAC
CGCATGGGCATGGCAATGTTGTCGGCTGTGGCCTTGTGGTATCACGACGG
GATTTTGGAGCCGTTCAGACCGGCCTATGTTTTTgcatcttccctcctgt
aAAGTGAACGGatctcccatcctcccggcGCGGGGATCAAAAACCGCAGA
TGCACGTGCATGCCACTTTGTTGGCGCTTCCCTTAATGAGTTGGAGGTCT
TTTCTTCGCATGGTGGAGGTCGTGGTGGATGTTTGTGCCGGGAGGAGATT
TTATTTCCACCCTTGAATATTTTTTGCGGCCATCCGTAGTCAAATTATCG
CCATGGACGATGCTCCCAGATCTAGATGCATGCGTTTTATTCGAGCCATC
CAAATGCAAGCCAAATGGTGGGATGGTCGAGTCCAGTGGCTTGCGGGAat
ttttccatcctttctATGAAACAATCGAGAGCTTTATGATTCTCGTGCAC
ACATTGCTGCGACATATTTCATGGGGTTGACGTGTCAGCGCCCTCCGACC
CAATCTATAtgttgtccttcttccctgctAAACACATGTGTATGCGACAC
TCGCTCAAACCTCCATTTTCGCACAGCCACTAAAAGAAGTGCAGGCACAA
TGGGAGAGTCATCTTCCAGTGGTTATATAGGCACAGGCCTGAGGGACTTA
CGGCCGTTGGAGTCACCTCTAAAAGTAATCCCTTATCGCCATGTCCTTCC
CACAAGCCCGCACACGtcccactctcctcctccctccgacgaTGCCATCC
CCGTCGTCGAGCGCCAAAGACAGAaagcctcccctcttttgaAGGCCTTG
GCCGGAAGTATGGGAGGTTTGGTCGAAGCGATTGCCCTTCAGCCGGTCGA
CACGATCAAAACCAGGATGCAAATCCTCCCGACGTCGTATCCATCCATGA
TCAAAACCGCCCAAAAAATCGCCTCGGAGGAGTCGGTGCCGGCATTGTGG
AAAGGTTTGACACCATTTGCCACCCATTTGTTTAGCAAATATGCCTTGCG
GTTCGGGACTAATGCCGCTTTTCAATCCATACTGACGGATAGCGAGACTG
GTAAAGGAaatgaggggaagggagggaggaggtacggGGCAAAGAGAGCC
ACACCGATCAATAAATCCTTCCATTCTGGGCGACAGTCGTGCATGATGGC
GACTtaacacctccctcccttccttcctccttcctaccctttccctccat
ctctttcctccccgccgcgcTCACGCAGGGAAactgtcctcctctcggcG
CCTGTTGGCGgggctgggggcgggcgttACAGAAgccatcctcatcgtca
cGCCCTTTGACGTGGTCAAAGtccgcctccaagcccaaCACGGCATGGAC
AAGGCAAACCTCAAGTACCAGGGTCCCCTGGACGCCGCTCGGAAGATCAT
AAGtcaggaaggggtgggggcgcTATGGTCGGGGGTCACGCCCACCATCT
ACCGAAACGGAATCCAGCAGGCCACCATGTTCTTTTTGAAGACGTGGATC
GACGACAACGTTCTTGGCGTGCGGAAGAGCTTGACCAAGGACGGGCAGGA
AACGCGGCAGCCCCAGGTCTGGCAGTCGATGGCCTCGGGCTTTATGGCGT
CTTGCCCCGGCCTGGTGATGACGAATCCGCTCGACATTGTTAAGGTAAGG
GCAAGTGGGATAAGATCGAGCAAGACAGCgacgcaggagagggggaaagg
ctgGGAAGCCCACCGCGGGGCGTGCACTTGATGatctatcctccctccct
cc back to topCoding sequence (CDS) from alignment at KK037251.1:99000..100801+ >rna9009 ID=rna9009|Name=rna9009|organism=Nannochloropsis gaditana|type=CDS|length=2166bp|location=Sequence derived from alignment at KK037251.1:99000..100801+ (Nannochloropsis gaditana)
ATGGGGTTGACGTGTCAGCGCCCTCCGACCCAATCTATAtgttgtccttc
ttccctgctAAACACATGTGTATGCGACACTCGCTCAAACCTCCATTTTC
GCACAGCCACTAAAAGAAGTGCAGGCACAATGGGAGAGTCATCTTCCAGT
GGTTATATAGGCACAGGCCTGAGGGACTTACGGCCGTTGGAGTCACCTCT
AAAAGTAATCCCTTATCGCCATGTCCTTCCCACAAGCCCGCACACGtccc
actctcctcctccctccgacgaTGCCATCCCCGTCGTCGAGCGCCAAAGA
CAGAaagcctcccctcttttgaAGGCCTTGGCCGGAAGTATGGGAGGTTT
GGTCGAAGCGATTGCCCTTCAGCCGGTCGACACGATCAAAACCAGGATGC
AAATCCTCCCGACGTCGTATCCATCCATGATCAAAACCGCCCAAAAAATC
GCCTCGGAGGAGTCGGTGCCGGCATTGTGGAAAGGTTTGACACCATTTGC
CACCCATTTGTTTAGCAAATATGCCTTGCGGTTCGGGACTAATGCCGCTT
TTCAATCCATACTGACGGATAGCGAGACTGGGAAactgtcctcctctcgg
cGCCTGTTGGCGgggctgggggcgggcgttACAGAAgccatcctcatcgt
cacGCCCTTTGACGTGGTCAAAGtccgcctccaagcccaaCACGGCATGG
ACAAGGCAAACCTCAAGTACCAGGGTCCCCTGGACGCCGCTCGGAAGATC
ATAAGtcaggaaggggtgggggcgcTATGGTCGGGGGTCACGCCCACCAT
CTACCGAAACGGAATCCAGCAGGCCACCATGTTCTTTTTGAAGACGTGGA
TCGACGACAACGTTCTTGGCGTGCGGAAGAGCTTGACCAAGGACGGGCAG
GAAACGCGGCAGCCCCAGGTCTGGCAGTCGATGGCCTCGGGCTTTATGGC
GTCTTGCCCCGGCCTGGTGATGACGAATCCGCTCGACATTGTTAAGGTAA
GGGCAAGTGGGATAAGATCGAGCAAGACAGCgacgcaggagagggggaaa
ggctgGGAAGCCCACCGCGGGGCGTGCACTTGAATGGGGTTGACGTGTCA
GCGCCCTCCGACCCAATCTATAtgttgtccttcttccctgctAAACACAT
GTGTATGCGACACTCGCTCAAACCTCCATTTTCGCACAGCCACTAAAAGA
AGTGCAGGCACAATGGGAGAGTCATCTTCCAGTGGTTATATAGGCACAGG
CCTGAGGGACTTACGGCCGTTGGAGTCACCTCTAAAAGTAATCCCTTATC
GCCATGTCCTTCCCACAAGCCCGCACACGtcccactctcctcctccctcc
gacgaTGCCATCCCCGTCGTCGAGCGCCAAAGACAGAaagcctcccctct
tttgaAGGCCTTGGCCGGAAGTATGGGAGGTTTGGTCGAAGCGATTGCCC
TTCAGCCGGTCGACACGATCAAAACCAGGATGCAAATCCTCCCGACGTCG
TATCCATCCATGATCAAAACCGCCCAAAAAATCGCCTCGGAGGAGTCGGT
GCCGGCATTGTGGAAAGGTTTGACACCATTTGCCACCCATTTGTTTAGCA
AATATGCCTTGCGGTTCGGGACTAATGCCGCTTTTCAATCCATACTGACG
GATAGCGAGACTGGGAAactgtcctcctctcggcGCCTGTTGGCGgggct
gggggcgggcgttACAGAAgccatcctcatcgtcacGCCCTTTGACGTGG
TCAAAGtccgcctccaagcccaaCACGGCATGGACAAGGCAAACCTCAAG
TACCAGGGTCCCCTGGACGCCGCTCGGAAGATCATAAGtcaggaaggggt
gggggcgcTATGGTCGGGGGTCACGCCCACCATCTACCGAAACGGAATCC
AGCAGGCCACCATGTTCTTTTTGAAGACGTGGATCGACGACAACGTTCTT
GGCGTGCGGAAGAGCTTGACCAAGGACGGGCAGGAAACGCGGCAGCCCCA
GGTCTGGCAGTCGATGGCCTCGGGCTTTATGGCGTCTTGCCCCGGCCTGG
TGATGACGAATCCGCTCGACATTGTTAAGGTAAGGGCAAGTGGGATAAGA
TCGAGCAAGACAGCgacgcaggagagggggaaaggctgGGAAGCCCACCG
CGGGGCGTGCACTTGA back to top
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