rna9006, rna9006 (mRNA) Nannochloropsis gaditana

Overview
Namerna9006
Unique Namerna9006
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length597
Alignment locationKK037251.1:84317..85511 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100708g1.3534.mrna
Orig protein idgnl|cribi|Naga_100708g1.3534
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:84317..85511 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100708g1gene8732Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21697.1cds8976Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9006rna9006-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9006 ID=rna9006|Name=rna9006|organism=Nannochloropsis gaditana|type=mRNA|length=597bp
ATGCAGGCGGAGAAGGAGGCCGAAAAAGAGCGAGCCCGGCGCAAGAAAGC
CGCCGGACAGTACGGCAAGGGGGGAAAGAAGGATATTGACCCCGATAAGG
TCAAGCACCGCGATGTTGCCACCGACGGCGCATCCTCCCTCCCTCCCCCG
GCCCCTGAGGCCCCTGCTCCTTCCCCTCCCGCCGGCGTCGCGAATCTTCT
CACGAATCTTTATTCGGCCGAGGAACCCTCCGTGGTCATTCGCCGGGTCA
AGGAGGCCTTGGAAGTGATGGGGGGGAAACTCAGCGTGAAGACAGCTTAC
CATCTCCGCGCGATCTTACCCGTCGACGGAGAGGGTGCGGTGGAAACGGA
CGTGAGAATTTATTCCGAGGGAGGGATCCAATTGATCAGCGTGACGCGGC
AGATGGGCGATCCGTTGGGTTTCCAAAAAGTCTTCCGGGCGTTCCGGGCG
CAAACAGTGGATTTGCATGGGGAAGAAGGAGAGGATGCGAATAACACGGC
GGAGGAAAGCCTGGGGTCTCCCTTTGGGAAAGGGGGACCGACGCCGTTGG
AGGAGGGGGAGGAAATGGGCTTGGCAAATGACGATGGCATGCTCTAG
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protein sequence of rna9006

>rna9006-protein ID=rna9006-protein|Name=rna9006|organism=Nannochloropsis gaditana|type=polypeptide|length=225bp
MGLDKVCESCGTFHRNKTQYWPLAGVVWERLASVSTSALTTLFLPLPSRN
SKNNTSTPTAKELRPAGDAAFHAATRIVKFLVYRTKCTTQKQMATPVTAT
RNASKNSFACFPFKFLFGGDKDSSNGLKKKDLKNGKGMHKPGDGGHGIAT
SDTATASYEGGSSMMSVDGEGTKTTGSGTQHPTTEGGFGVAVNAEGVRTI
AGYEIRDTLGKGMSGKVKRGYNTSR
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mRNA from alignment at KK037251.1:84317..85511-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9006 ID=rna9006|Name=rna9006|organism=Nannochloropsis gaditana|type=mRNA|length=1195bp|location=Sequence derived from alignment at KK037251.1:84317..85511- (Nannochloropsis gaditana)
ACGTGCAATTGTCGTGCAGGTGCGCGGGTTTTCCCAGCCACTTGGCCCTG
TATGTGTCGGAAATCCTTTTTAGGGGGGGCGCTTGACTCATCGGTCGTCG
TGTTCGGCAAAGTCTGGCCTGTGTCGATCAGTACCAGCACCCAAGTGCAA
TCGGTGCAATCCCACCCTGTCGCAGCCAAGTGGCCTTTGCCAATGGCTTG
CACCCGACTCGGATAGCACTCGGTGCCTGTCGAAGTGATGGTAGGAATGG
TGCTTTGGCCCTTGATGGGTTTTTATTACATGCACGGTGGTCTCTTTTGC
CTAGGAAGAACAAGGGAGGGCCGGGACCCCTCTGTGCTGATGTCCGCATG
ATGCCTGTCTCTCGGTATCTTGTCACGTCCATGGACACTAACGCCACTGT
CCATGGGCCTTGACAAGGTGTGCGAGTCGTGCGGGACTTTTCATCGTAAT
AAGACGCAATACTGGCCATTGGCTGGCGTAGTCTGGGAGCGTCTCGCATC
TGTCTCTACCAGTGCCCTGACAACTCTTTTCCTCCCTCTTCCTTCCCGAA
ACAGCAAAAACAACACTTCGACGCCCACAGCGAAGGAACTAAGACCCGCA
GGAGACGCAGCATTCCACGCCGCTACCCGCATCGTCAAGTTCCTCGTCTA
TCGTACTAAGTGCACGACCCAAAAGCAAATGGCCACCCCTGTAACGGCGA
CCAGAAACGCATCGAAAAACTCCTTTGCCTGCTTCCCCTTCAAATTTCTG
TTCGGGGGCGACAAAGACAGTAGCAACGGCTTGAAAAAAAAGGACCTCAA
GAACGGTAAAGGCATGCACAAGCCCGGGGACGGCGGGCACGGGATCGCCA
CCTCCGACACGGCGACCGCCTCCTATGAAGGGGGTTCCTCCATGATGAGC
GTGGACGGAGAGGGGACCAAGACGACAGGCTCCGGGACCCAGCATCCCAC
CACGGAGGGTGGATTTGGCGTGGCGGTGAACGCGGAGGGCGTGCGGACCA
TTGCCGGTTACGAAATTCGGGACACCTTGGGCAAAGGCATGAGTGGGAAA
GTGAAGCGGGGCTACAACACCAGCAGGTAGGGAGGGCGGATGGTGGGTTC
TGGGGGCGCAAACTACTCGTGTGTAACGGTCTTTCCCCTAGACAGCCTCC
CACACTCATGAACCCCTTCCCTTTTCTCCCTCCCTCCCTCCCTCC
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Coding sequence (CDS) from alignment at KK037251.1:84317..85511-

>rna9006 ID=rna9006|Name=rna9006|organism=Nannochloropsis gaditana|type=CDS|length=678bp|location=Sequence derived from alignment at KK037251.1:84317..85511- (Nannochloropsis gaditana)
ATGGGCCTTGACAAGGTGTGCGAGTCGTGCGGGACTTTTCATCGTAATAA
GACGCAATACTGGCCATTGGCTGGCGTAGTCTGGGAGCGTCTCGCATCTG
TCTCTACCAGTGCCCTGACAACTCTTTTCCTCCCTCTTCCTTCCCGAAAC
AGCAAAAACAACACTTCGACGCCCACAGCGAAGGAACTAAGACCCGCAGG
AGACGCAGCATTCCACGCCGCTACCCGCATCGTCAAGTTCCTCGTCTATC
GTACTAAGTGCACGACCCAAAAGCAAATGGCCACCCCTGTAACGGCGACC
AGAAACGCATCGAAAAACTCCTTTGCCTGCTTCCCCTTCAAATTTCTGTT
CGGGGGCGACAAAGACAGTAGCAACGGCTTGAAAAAAAAGGACCTCAAGA
ACGGTAAAGGCATGCACAAGCCCGGGGACGGCGGGCACGGGATCGCCACC
TCCGACACGGCGACCGCCTCCTATGAAGGGGGTTCCTCCATGATGAGCGT
GGACGGAGAGGGGACCAAGACGACAGGCTCCGGGACCCAGCATCCCACCA
CGGAGGGTGGATTTGGCGTGGCGGTGAACGCGGAGGGCGTGCGGACCATT
GCCGGTTACGAAATTCGGGACACCTTGGGCAAAGGCATGAGTGGGAAAGT
GAAGCGGGGCTACAACACCAGCAGGTAG
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Synonyms
Publications